RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TNXBP22105 4242 aa8.06□□□□□ -1.12
APP-208ENST00000439274 EPPK1P58107 5090 aaKnown RBP8.06□□□□□ -1.12
APP-208ENST00000439274 Q5VSD8 79 aa8□□□□□ -1.13
APP-208ENST00000439274 KIAA1109Q2LD37 5005 aa8□□□□□ -1.13
APP-208ENST00000439274 MYCBP2O75592 4640 aa8□□□□□ -1.13
APP-208ENST00000439274 DMBT1Q9UGM3 2413 aaPredicted RBP7.95□□□□□ -1.14
APP-208ENST00000439274 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
APP-208ENST00000439274 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
APP-208ENST00000439274 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
APP-208ENST00000439274 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
APP-208ENST00000439274 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
APP-208ENST00000439274 XP32Q5T750 250 aa7.87□□□□□ -1.15
APP-208ENST00000439274 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
APP-208ENST00000439274 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
APP-208ENST00000439274 K7ERS5 55 aa7.84□□□□□ -1.15
APP-208ENST00000439274 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
APP-208ENST00000439274 A0A0D9SG42 100 aa7.81□□□□□ -1.16
APP-208ENST00000439274 S4R3F8 94 aa7.81□□□□□ -1.16
APP-208ENST00000439274 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
APP-208ENST00000439274 LPAP08519 4548 aa7.77□□□□□ -1.17
APP-208ENST00000439274 MT1HL1P0DM35 61 aa7.77□□□□□ -1.17
APP-208ENST00000439274 P0C880 135 aa7.75□□□□□ -1.17
APP-208ENST00000439274 ROMO1P60602 79 aa7.72□□□□□ -1.17
APP-208ENST00000439274 LRP2P98164 4655 aa7.67□□□□□ -1.18
APP-208ENST00000439274 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
APP-208ENST00000439274 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
APP-208ENST00000439274 HERC2O95714 4834 aa7.63□□□□□ -1.19
APP-208ENST00000439274 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
APP-208ENST00000439274 TPRXLQ17RH7 258 aa7.57□□□□□ -1.2
APP-208ENST00000439274 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
APP-208ENST00000439274 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
APP-208ENST00000439274 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
APP-208ENST00000439274 H3BS24 57 aa7.49□□□□□ -1.21
APP-208ENST00000439274 M0QZ58 72 aa7.39□□□□□ -1.23
APP-208ENST00000439274 J3QL48 77 aa7.37□□□□□ -1.23
APP-208ENST00000439274 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
APP-208ENST00000439274 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
APP-208ENST00000439274 R4GN34 69 aa7.26□□□□□ -1.25
APP-208ENST00000439274 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
APP-208ENST00000439274 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
APP-208ENST00000439274 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
APP-208ENST00000439274 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
APP-208ENST00000439274 HERC1Q15751 4861 aa7.17□□□□□ -1.26
APP-208ENST00000439274 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
APP-208ENST00000439274 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
APP-208ENST00000439274 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
APP-208ENST00000439274 MUC2Q02817 5179 aa7.06□□□□□ -1.28
APP-208ENST00000439274 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
APP-208ENST00000439274 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
APP-208ENST00000439274 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
APP-208ENST00000439274 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
APP-208ENST00000439274 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
APP-208ENST00000439274 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
APP-208ENST00000439274 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
APP-208ENST00000439274 A0A0A0MQY5 61 aa6.71□□□□□ -1.34
APP-208ENST00000439274 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
APP-208ENST00000439274 TNP1P09430 55 aa6.62□□□□□ -1.35
APP-208ENST00000439274 MT1HP80294 61 aa6.52□□□□□ -1.37
APP-208ENST00000439274 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
APP-208ENST00000439274 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
APP-208ENST00000439274 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
APP-208ENST00000439274 M0R2T5 61 aa6.47□□□□□ -1.37
APP-208ENST00000439274 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.37
APP-208ENST00000439274 MT1FP04733 61 aa6.37□□□□□ -1.39
APP-208ENST00000439274 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
APP-208ENST00000439274 MT2AP02795 61 aa6.35□□□□□ -1.39
APP-208ENST00000439274 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
APP-208ENST00000439274 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
APP-208ENST00000439274 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
APP-208ENST00000439274 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
APP-208ENST00000439274 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
APP-208ENST00000439274 MT1BP07438 61 aa6.16□□□□□ -1.42
APP-208ENST00000439274 KRTAP10-5P60370 271 aa6.15□□□□□ -1.43
APP-208ENST00000439274 MT1XP80297 61 aa6.14□□□□□ -1.43
APP-208ENST00000439274 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
APP-208ENST00000439274 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
APP-208ENST00000439274 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
APP-208ENST00000439274 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
APP-208ENST00000439274 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
APP-208ENST00000439274 LCE2BO14633 110 aa5.91□□□□□ -1.46
APP-208ENST00000439274 USH2AO75445 5202 aa5.84□□□□□ -1.47
APP-208ENST00000439274 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
APP-208ENST00000439274 KMT2DO14686 5537 aa5.79□□□□□ -1.48
APP-208ENST00000439274 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
APP-208ENST00000439274 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.51
APP-208ENST00000439274 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
APP-208ENST00000439274 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
APP-208ENST00000439274 INE1O15225 51 aa5.59□□□□□ -1.51
APP-208ENST00000439274 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
APP-208ENST00000439274 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
APP-208ENST00000439274 LCE2DQ5TA82 110 aaPredicted RBP5.5□□□□□ -1.53
APP-208ENST00000439274 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
APP-208ENST00000439274 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
APP-208ENST00000439274 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
APP-208ENST00000439274 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
APP-208ENST00000439274 MT1LQ93083 61 aa5.3□□□□□ -1.56
APP-208ENST00000439274 MT1EP04732 61 aa5.29□□□□□ -1.56
APP-208ENST00000439274 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
APP-208ENST00000439274 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
APP-208ENST00000439274 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms