RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 FAT3Q8TDW7 4589 aa9.98□□□□□ -0.81
FAM239A-202ENST00000438107 K7ERS5 55 aa9.97□□□□□ -0.81
FAM239A-202ENST00000438107 TNXBP22105 4242 aa9.95□□□□□ -0.82
FAM239A-202ENST00000438107 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
FAM239A-202ENST00000438107 RYR1P21817 5038 aa9.92□□□□□ -0.82
FAM239A-202ENST00000438107 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
FAM239A-202ENST00000438107 KRTAP25-1Q3LHN0 102 aa9.9□□□□□ -0.82
FAM239A-202ENST00000438107 XP32Q5T750 250 aa9.9□□□□□ -0.82
FAM239A-202ENST00000438107 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
FAM239A-202ENST00000438107 KIAA1109Q2LD37 5005 aa9.86□□□□□ -0.83
FAM239A-202ENST00000438107 S4R3F8 94 aa9.85□□□□□ -0.83
FAM239A-202ENST00000438107 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
FAM239A-202ENST00000438107 EPPK1P58107 5090 aaKnown RBP9.78□□□□□ -0.84
FAM239A-202ENST00000438107 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.84
FAM239A-202ENST00000438107 MYCBP2O75592 4640 aa9.77□□□□□ -0.85
FAM239A-202ENST00000438107 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
FAM239A-202ENST00000438107 ROMO1P60602 79 aa9.73□□□□□ -0.85
FAM239A-202ENST00000438107 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
FAM239A-202ENST00000438107 A0A0D9SG42 100 aa9.64□□□□□ -0.87
FAM239A-202ENST00000438107 P0C880 135 aa9.63□□□□□ -0.87
FAM239A-202ENST00000438107 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
FAM239A-202ENST00000438107 TPRXLQ17RH7 258 aa9.55□□□□□ -0.88
FAM239A-202ENST00000438107 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
FAM239A-202ENST00000438107 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
FAM239A-202ENST00000438107 M0QZ58 72 aa9.43□□□□□ -0.9
FAM239A-202ENST00000438107 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
FAM239A-202ENST00000438107 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
FAM239A-202ENST00000438107 LRP2P98164 4655 aa9.34□□□□□ -0.91
FAM239A-202ENST00000438107 SPINT4Q6UDR6 99 aa9.34□□□□□ -0.91
FAM239A-202ENST00000438107 LPAP08519 4548 aa9.33□□□□□ -0.92
FAM239A-202ENST00000438107 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
FAM239A-202ENST00000438107 BIRC6Q9NR09 4857 aa9.26□□□□□ -0.93
FAM239A-202ENST00000438107 H3BS24 57 aa9.26□□□□□ -0.93
FAM239A-202ENST00000438107 HERC2O95714 4834 aa9.2□□□□□ -0.94
FAM239A-202ENST00000438107 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
FAM239A-202ENST00000438107 J3QL48 77 aa9.16□□□□□ -0.94
FAM239A-202ENST00000438107 R4GN34 69 aa9.12□□□□□ -0.95
FAM239A-202ENST00000438107 KRTAP15-1Q3LI76 137 aa9.04□□□□□ -0.96
FAM239A-202ENST00000438107 MUC17Q685J3 4493 aa9.02□□□□□ -0.97
FAM239A-202ENST00000438107 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
FAM239A-202ENST00000438107 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
FAM239A-202ENST00000438107 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
FAM239A-202ENST00000438107 KRTAP19-2Q3LHN2 52 aa8.89□□□□□ -0.99
FAM239A-202ENST00000438107 HERC1Q15751 4861 aa8.8□□□□□ -1
FAM239A-202ENST00000438107 NDUFAF8A1L188 74 aa8.76□□□□□ -1.01
FAM239A-202ENST00000438107 MUC2Q02817 5179 aa8.74□□□□□ -1.01
FAM239A-202ENST00000438107 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
FAM239A-202ENST00000438107 PP632Q6XCG6 107 aa8.66□□□□□ -1.02
FAM239A-202ENST00000438107 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.02
FAM239A-202ENST00000438107 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
FAM239A-202ENST00000438107 FLGP20930 4061 aaPredicted RBP8.55□□□□□ -1.04
FAM239A-202ENST00000438107 KRTAP23-1A1A580 65 aa8.41□□□□□ -1.06
FAM239A-202ENST00000438107 TNP1P09430 55 aa8.39□□□□□ -1.07
FAM239A-202ENST00000438107 LCE2CQ5TA81 110 aa8.34□□□□□ -1.08
FAM239A-202ENST00000438107 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
FAM239A-202ENST00000438107 UBR4Q5T4S7 5183 aa8.33□□□□□ -1.08
FAM239A-202ENST00000438107 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
FAM239A-202ENST00000438107 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
FAM239A-202ENST00000438107 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
FAM239A-202ENST00000438107 KRTAP19-1Q8IUB9 90 aa8.17□□□□□ -1.1
FAM239A-202ENST00000438107 MT1HP80294 61 aa8.11□□□□□ -1.11
FAM239A-202ENST00000438107 M0R2T5 61 aa8.1□□□□□ -1.11
FAM239A-202ENST00000438107 SPRR5A0A1B0GTR4 108 aa8.08□□□□□ -1.12
FAM239A-202ENST00000438107 MT2AP02795 61 aa7.97□□□□□ -1.13
FAM239A-202ENST00000438107 MT1FP04733 61 aa7.95□□□□□ -1.14
FAM239A-202ENST00000438107 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
FAM239A-202ENST00000438107 KRTAP9-8Q9BYQ0 159 aa7.92□□□□□ -1.14
FAM239A-202ENST00000438107 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.15
FAM239A-202ENST00000438107 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
FAM239A-202ENST00000438107 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
FAM239A-202ENST00000438107 KRTAP8-1Q8IUC2 63 aa7.76□□□□□ -1.17
FAM239A-202ENST00000438107 MT1BP07438 61 aa7.74□□□□□ -1.17
FAM239A-202ENST00000438107 KRTAP10-5P60370 271 aa7.71□□□□□ -1.17
FAM239A-202ENST00000438107 MT1XP80297 61 aa7.69□□□□□ -1.18
FAM239A-202ENST00000438107 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
FAM239A-202ENST00000438107 KRTAP10-12P60413 245 aa7.59□□□□□ -1.2
FAM239A-202ENST00000438107 KRTAP12-3P60328 96 aa7.53□□□□□ -1.2
FAM239A-202ENST00000438107 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
FAM239A-202ENST00000438107 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
FAM239A-202ENST00000438107 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
FAM239A-202ENST00000438107 LCE2BO14633 110 aa7.33□□□□□ -1.24
FAM239A-202ENST00000438107 USH2AO75445 5202 aa7.22□□□□□ -1.25
FAM239A-202ENST00000438107 INE1O15225 51 aa7.19□□□□□ -1.26
FAM239A-202ENST00000438107 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
FAM239A-202ENST00000438107 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
FAM239A-202ENST00000438107 KRTAP4-8A0A0G2JLE6 195 aa6.93□□□□□ -1.3
FAM239A-202ENST00000438107 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
FAM239A-202ENST00000438107 KMT2DO14686 5537 aa6.88□□□□□ -1.31
FAM239A-202ENST00000438107 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
FAM239A-202ENST00000438107 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
FAM239A-202ENST00000438107 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
FAM239A-202ENST00000438107 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
FAM239A-202ENST00000438107 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
FAM239A-202ENST00000438107 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
FAM239A-202ENST00000438107 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
FAM239A-202ENST00000438107 MT1LQ93083 61 aa6.68□□□□□ -1.34
FAM239A-202ENST00000438107 KRTAP2-3P0C7H8 128 aa6.67□□□□□ -1.34
FAM239A-202ENST00000438107 KRTAP2-4Q9BYR9 128 aa6.67□□□□□ -1.34
FAM239A-202ENST00000438107 KRTAP2-1Q9BYU5 128 aa6.67□□□□□ -1.34
FAM239A-202ENST00000438107 MT1EP04732 61 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms