RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
UBE3A-204ENST00000438097 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
UBE3A-204ENST00000438097 DNAH3Q8TD57 4116 aa5.94□□□□□ -1.46
UBE3A-204ENST00000438097 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
UBE3A-204ENST00000438097 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
UBE3A-204ENST00000438097 ZNF469Q96JG9 3925 aaPredicted RBP5.92□□□□□ -1.46
UBE3A-204ENST00000438097 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
UBE3A-204ENST00000438097 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
UBE3A-204ENST00000438097 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
UBE3A-204ENST00000438097 KMT2AQ03164 3969 aa5.73□□□□□ -1.49
UBE3A-204ENST00000438097 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.49
UBE3A-204ENST00000438097 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
UBE3A-204ENST00000438097 HUWE1Q7Z6Z7 4374 aaKnown RBP5.7□□□□□ -1.5
UBE3A-204ENST00000438097 DNAH2Q9P225 4427 aa5.69□□□□□ -1.5
UBE3A-204ENST00000438097 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
UBE3A-204ENST00000438097 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
UBE3A-204ENST00000438097 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
UBE3A-204ENST00000438097 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.5
UBE3A-204ENST00000438097 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
UBE3A-204ENST00000438097 KRTAP4-5Q9BYR2 181 aa5.58□□□□□ -1.52
UBE3A-204ENST00000438097 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
UBE3A-204ENST00000438097 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
UBE3A-204ENST00000438097 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
UBE3A-204ENST00000438097 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
UBE3A-204ENST00000438097 PRKDCP78527 4128 aaKnown RBP5.41□□□□□ -1.54
UBE3A-204ENST00000438097 MT1HP80294 61 aa5.39□□□□□ -1.55
UBE3A-204ENST00000438097 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
UBE3A-204ENST00000438097 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
UBE3A-204ENST00000438097 MT2AP02795 61 aa5.23□□□□□ -1.57
UBE3A-204ENST00000438097 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
UBE3A-204ENST00000438097 SPRR2EP22531 72 aa5.22□□□□□ -1.57
UBE3A-204ENST00000438097 SPRR2BP35325 72 aa5.22□□□□□ -1.57
UBE3A-204ENST00000438097 SPRR2AP35326 72 aa5.22□□□□□ -1.57
UBE3A-204ENST00000438097 LCE2BO14633 110 aa5.12□□□□□ -1.59
UBE3A-204ENST00000438097 SPRR2DP22532 72 aa5.11□□□□□ -1.59
UBE3A-204ENST00000438097 DYNC2H1Q8NCM8 4307 aaKnown RBP5.06□□□□□ -1.6
UBE3A-204ENST00000438097 DNAH9Q9NYC9 4486 aa5.05□□□□□ -1.6
UBE3A-204ENST00000438097 MT1FP04733 61 aa5.05□□□□□ -1.6
UBE3A-204ENST00000438097 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
UBE3A-204ENST00000438097 VPS13DQ5THJ4 4388 aa5.04□□□□□ -1.6
UBE3A-204ENST00000438097 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
UBE3A-204ENST00000438097 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
UBE3A-204ENST00000438097 DNAH10Q8IVF4 4471 aa5.02□□□□□ -1.61
UBE3A-204ENST00000438097 PKHD1L1Q86WI1 4243 aa4.91□□□□□ -1.62
UBE3A-204ENST00000438097 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.62
UBE3A-204ENST00000438097 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
UBE3A-204ENST00000438097 DNAH17Q9UFH2 4485 aa4.85□□□□□ -1.63
UBE3A-204ENST00000438097 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
UBE3A-204ENST00000438097 MT1GP13640 62 aa4.84□□□□□ -1.63
UBE3A-204ENST00000438097 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
UBE3A-204ENST00000438097 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
UBE3A-204ENST00000438097 STARD9Q9P2P6 4700 aa4.76□□□□□ -1.65
UBE3A-204ENST00000438097 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
UBE3A-204ENST00000438097 MT1XP80297 61 aa4.72□□□□□ -1.65
UBE3A-204ENST00000438097 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
UBE3A-204ENST00000438097 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
UBE3A-204ENST00000438097 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
UBE3A-204ENST00000438097 DNAH5Q8TE73 4624 aa4.64□□□□□ -1.67
UBE3A-204ENST00000438097 MT3P25713 68 aa4.59□□□□□ -1.68
UBE3A-204ENST00000438097 PLECQ15149 4684 aaKnown RBP4.58□□□□□ -1.68
UBE3A-204ENST00000438097 MT1LQ93083 61 aa4.58□□□□□ -1.68
UBE3A-204ENST00000438097 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
UBE3A-204ENST00000438097 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
UBE3A-204ENST00000438097 PKD1P98161 4303 aa4.51□□□□□ -1.69
UBE3A-204ENST00000438097 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
UBE3A-204ENST00000438097 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
UBE3A-204ENST00000438097 HSPG2P98160 4391 aa4.48□□□□□ -1.69
UBE3A-204ENST00000438097 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
UBE3A-204ENST00000438097 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.7
UBE3A-204ENST00000438097 MT1BP07438 61 aa4.46□□□□□ -1.7
UBE3A-204ENST00000438097 TNXBP22105 4242 aa4.43□□□□□ -1.7
UBE3A-204ENST00000438097 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
UBE3A-204ENST00000438097 MT4P47944 62 aa4.4□□□□□ -1.7
UBE3A-204ENST00000438097 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
UBE3A-204ENST00000438097 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
UBE3A-204ENST00000438097 MT1EP04732 61 aa4.35□□□□□ -1.71
UBE3A-204ENST00000438097 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
UBE3A-204ENST00000438097 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
UBE3A-204ENST00000438097 PRM1P04553 51 aa4.3□□□□□ -1.72
UBE3A-204ENST00000438097 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
UBE3A-204ENST00000438097 MT1MQ8N339 61 aa4.26□□□□□ -1.73
UBE3A-204ENST00000438097 FAT1Q14517 4588 aa4.25□□□□□ -1.73
UBE3A-204ENST00000438097 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
UBE3A-204ENST00000438097 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
UBE3A-204ENST00000438097 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.74
UBE3A-204ENST00000438097 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
UBE3A-204ENST00000438097 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
UBE3A-204ENST00000438097 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
UBE3A-204ENST00000438097 MT1AP04731 61 aa4□□□□□ -1.77
UBE3A-204ENST00000438097 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
UBE3A-204ENST00000438097 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
UBE3A-204ENST00000438097 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
UBE3A-204ENST00000438097 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
UBE3A-204ENST00000438097 MYCBP2O75592 4640 aa3.96□□□□□ -1.78
UBE3A-204ENST00000438097 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
UBE3A-204ENST00000438097 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
UBE3A-204ENST00000438097 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
UBE3A-204ENST00000438097 DNHD1Q96M86 4753 aa3.88□□□□□ -1.79
UBE3A-204ENST00000438097 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
UBE3A-204ENST00000438097 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms