RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 SCGB1A1P11684 91 aa9.74□□□□□ -0.85
GTF3A-203ENST00000435781 MT-ATP8P03928 68 aa9.73□□□□□ -0.85
GTF3A-203ENST00000435781 KLKP1Q107X0 134 aa9.73□□□□□ -0.85
GTF3A-203ENST00000435781 IMUPQ9GZP8 106 aa9.73□□□□□ -0.85
GTF3A-203ENST00000435781 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-203ENST00000435781 H3BPC8 53 aa9.67□□□□□ -0.86
GTF3A-203ENST00000435781 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
GTF3A-203ENST00000435781 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
GTF3A-203ENST00000435781 A8MUN3 132 aa9.64□□□□□ -0.87
GTF3A-203ENST00000435781 KRTAP19-1Q8IUB9 90 aa9.59□□□□□ -0.87
GTF3A-203ENST00000435781 NDUFC1O43677 76 aa9.56□□□□□ -0.88
GTF3A-203ENST00000435781 SMIM20Q8N5G0 67 aa9.54□□□□□ -0.88
GTF3A-203ENST00000435781 FCGBPQ9Y6R7 5405 aaPredicted RBP9.53□□□□□ -0.88
GTF3A-203ENST00000435781 TRAV7A0A075B6U4 112 aa9.53□□□□□ -0.88
GTF3A-203ENST00000435781 KRTAP19-6Q3LI70 58 aa9.47□□□□□ -0.89
GTF3A-203ENST00000435781 DMAC1Q96GE9 116 aa9.47□□□□□ -0.89
GTF3A-203ENST00000435781 SPRR2GQ9BYE4 73 aa9.44□□□□□ -0.9
GTF3A-203ENST00000435781 H0YAA0 97 aa9.43□□□□□ -0.9
GTF3A-203ENST00000435781 KRTAP4-12Q9BQ66 201 aa9.4□□□□□ -0.9
GTF3A-203ENST00000435781 CRIPTQ9P021 101 aa9.36□□□□□ -0.91
GTF3A-203ENST00000435781 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
GTF3A-203ENST00000435781 MT1BP07438 61 aa9.33□□□□□ -0.92
GTF3A-203ENST00000435781 Q5VV11 94 aa9.33□□□□□ -0.92
GTF3A-203ENST00000435781 ADM2Q7Z4H4 148 aa9.33□□□□□ -0.92
GTF3A-203ENST00000435781 SNURFQ9Y675 71 aa9.31□□□□□ -0.92
GTF3A-203ENST00000435781 SERP2Q8N6R1 65 aa9.29□□□□□ -0.92
GTF3A-203ENST00000435781 LCE3BQ5TA77 95 aa9.28□□□□□ -0.92
GTF3A-203ENST00000435781 ACYP2P14621 99 aa9.26□□□□□ -0.93
GTF3A-203ENST00000435781 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
GTF3A-203ENST00000435781 KRTAP9-9Q9BYP9 154 aa9.19□□□□□ -0.94
GTF3A-203ENST00000435781 KRTAP9-4Q9BYQ2 154 aa9.19□□□□□ -0.94
GTF3A-203ENST00000435781 KRTAP9-7A8MTY7 169 aa9.17□□□□□ -0.94
GTF3A-203ENST00000435781 MACF1Q9UPN3 7388 aaKnown RBP9.16□□□□□ -0.94
GTF3A-203ENST00000435781 P0C880 135 aa9.16□□□□□ -0.94
GTF3A-203ENST00000435781 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.94
GTF3A-203ENST00000435781 A6NN06 94 aa9.11□□□□□ -0.95
GTF3A-203ENST00000435781 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
GTF3A-203ENST00000435781 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
GTF3A-203ENST00000435781 COX7CP15954 63 aa9.06□□□□□ -0.96
GTF3A-203ENST00000435781 KRTAP10-5P60370 271 aa9.06□□□□□ -0.96
GTF3A-203ENST00000435781 R4GN34 69 aa9.06□□□□□ -0.96
GTF3A-203ENST00000435781 M0QZ58 72 aa9.02□□□□□ -0.97
GTF3A-203ENST00000435781 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
GTF3A-203ENST00000435781 SYNE2Q8WXH0 6885 aaKnown RBP8.97□□□□□ -0.97
GTF3A-203ENST00000435781 CYSTM1Q9H1C7 97 aa8.91□□□□□ -0.98
GTF3A-203ENST00000435781 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
GTF3A-203ENST00000435781 H7BZZ5 65 aa8.89□□□□□ -0.99
GTF3A-203ENST00000435781 COA5Q86WW8 74 aa8.89□□□□□ -0.99
GTF3A-203ENST00000435781 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
GTF3A-203ENST00000435781 ANAPC13Q9BS18 74 aa8.86□□□□□ -0.99
GTF3A-203ENST00000435781 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
GTF3A-203ENST00000435781 MT1XP80297 61 aa8.81□□□□□ -1
GTF3A-203ENST00000435781 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
GTF3A-203ENST00000435781 LCE1DQ5T752 114 aa8.71□□□□□ -1.02
GTF3A-203ENST00000435781 CCDC179H3BU77 68 aa8.69□□□□□ -1.02
GTF3A-203ENST00000435781 KRTAP4-7Q9BYR0 210 aa8.69□□□□□ -1.02
GTF3A-203ENST00000435781 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
GTF3A-203ENST00000435781 SEC61GP60059 68 aa8.62□□□□□ -1.03
GTF3A-203ENST00000435781 SERP1Q9Y6X1 66 aa8.6□□□□□ -1.03
GTF3A-203ENST00000435781 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
GTF3A-203ENST00000435781 KRTAP5-9P26371 169 aa8.54□□□□□ -1.04
GTF3A-203ENST00000435781 KMT2DO14686 5537 aa8.53□□□□□ -1.04
GTF3A-203ENST00000435781 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
GTF3A-203ENST00000435781 MUC12Q9UKN1 5478 aa8.5□□□□□ -1.05
GTF3A-203ENST00000435781 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
GTF3A-203ENST00000435781 A0A1B0GU33 70 aa8.46□□□□□ -1.06
GTF3A-203ENST00000435781 NEBP20929 6669 aa8.46□□□□□ -1.06
GTF3A-203ENST00000435781 LCE4AQ5TA78 99 aa8.44□□□□□ -1.06
GTF3A-203ENST00000435781 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
GTF3A-203ENST00000435781 A0A1B0GU69 56 aa8.42□□□□□ -1.06
GTF3A-203ENST00000435781 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
GTF3A-203ENST00000435781 A0A0D9SG42 100 aa8.4□□□□□ -1.06
GTF3A-203ENST00000435781 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
GTF3A-203ENST00000435781 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
GTF3A-203ENST00000435781 KRTAP10-12P60413 245 aa8.36□□□□□ -1.07
GTF3A-203ENST00000435781 TMEM258P61165 79 aa8.36□□□□□ -1.07
GTF3A-203ENST00000435781 KRTAP4-2Q9BYR5 136 aa8.36□□□□□ -1.07
GTF3A-203ENST00000435781 SPRR2FQ96RM1 72 aa8.34□□□□□ -1.07
GTF3A-203ENST00000435781 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
GTF3A-203ENST00000435781 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
GTF3A-203ENST00000435781 SPINT4Q6UDR6 99 aa8.26□□□□□ -1.09
GTF3A-203ENST00000435781 PRR15LQ9BU68 103 aa8.23□□□□□ -1.09
GTF3A-203ENST00000435781 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
GTF3A-203ENST00000435781 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
GTF3A-203ENST00000435781 A8MU10 97 aa8.18□□□□□ -1.1
GTF3A-203ENST00000435781 KRTAP4-11Q9BYQ6 195 aa8.18□□□□□ -1.1
GTF3A-203ENST00000435781 SPRR2EP22531 72 aa8.16□□□□□ -1.1
GTF3A-203ENST00000435781 SPRR2BP35325 72 aa8.16□□□□□ -1.1
GTF3A-203ENST00000435781 SPRR2AP35326 72 aa8.16□□□□□ -1.1
GTF3A-203ENST00000435781 LCE1AQ5T7P2 110 aa8.09□□□□□ -1.11
GTF3A-203ENST00000435781 KRTAP20-1Q3LI63 56 aa8.07□□□□□ -1.12
GTF3A-203ENST00000435781 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
GTF3A-203ENST00000435781 LCE5AQ5TCM9 118 aa7.97□□□□□ -1.13
GTF3A-203ENST00000435781 UQCR11O14957 56 aa7.96□□□□□ -1.14
GTF3A-203ENST00000435781 KRTAP2-3P0C7H8 128 aa7.92□□□□□ -1.14
GTF3A-203ENST00000435781 KRTAP2-4Q9BYR9 128 aa7.92□□□□□ -1.14
GTF3A-203ENST00000435781 SPRR2DP22532 72 aa7.88□□□□□ -1.15
GTF3A-203ENST00000435781 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
GTF3A-203ENST00000435781 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
GTF3A-203ENST00000435781 V9GYY9 64 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms