RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 SMIM20Q8N5G0 67 aa9.64□□□□□ -0.87
LMBR1-210ENST00000434503 C4orf26Q17RF5 130 aa9.63□□□□□ -0.87
LMBR1-210ENST00000434503 H3BPC8 53 aa9.61□□□□□ -0.87
LMBR1-210ENST00000434503 MP68P56378 58 aa9.61□□□□□ -0.87
LMBR1-210ENST00000434503 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
LMBR1-210ENST00000434503 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
LMBR1-210ENST00000434503 NEBP20929 6669 aa9.59□□□□□ -0.87
LMBR1-210ENST00000434503 C1orf64Q8NEQ6 169 aa9.58□□□□□ -0.88
LMBR1-210ENST00000434503 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
LMBR1-210ENST00000434503 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
LMBR1-210ENST00000434503 KRTAP3-1Q9BYR8 98 aa9.48□□□□□ -0.89
LMBR1-210ENST00000434503 A6NN06 94 aa9.43□□□□□ -0.9
LMBR1-210ENST00000434503 S4R3F8 94 aa9.43□□□□□ -0.9
LMBR1-210ENST00000434503 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
LMBR1-210ENST00000434503 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
LMBR1-210ENST00000434503 MUC12Q9UKN1 5478 aa9.38□□□□□ -0.91
LMBR1-210ENST00000434503 A8MUN3 132 aa9.37□□□□□ -0.91
LMBR1-210ENST00000434503 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
LMBR1-210ENST00000434503 LOC100996750A0A140TA64 210 aa9.36□□□□□ -0.91
LMBR1-210ENST00000434503 MT1BP07438 61 aa9.36□□□□□ -0.91
LMBR1-210ENST00000434503 LCA10Q71F78 164 aa9.36□□□□□ -0.91
LMBR1-210ENST00000434503 KRTAP4-6Q9BYQ5 205 aa9.36□□□□□ -0.91
LMBR1-210ENST00000434503 KRTAP20-1Q3LI63 56 aa9.33□□□□□ -0.92
LMBR1-210ENST00000434503 Q5VV11 94 aa9.31□□□□□ -0.92
LMBR1-210ENST00000434503 KRTAP19-8Q3LI54 63 aa9.27□□□□□ -0.93
LMBR1-210ENST00000434503 SPRR2GQ9BYE4 73 aa9.26□□□□□ -0.93
LMBR1-210ENST00000434503 COX7CP15954 63 aa9.24□□□□□ -0.93
LMBR1-210ENST00000434503 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
LMBR1-210ENST00000434503 C20orf197Q8N268 126 aa9.23□□□□□ -0.93
LMBR1-210ENST00000434503 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
LMBR1-210ENST00000434503 KRTAP5-9P26371 169 aa9.22□□□□□ -0.93
LMBR1-210ENST00000434503 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
LMBR1-210ENST00000434503 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
LMBR1-210ENST00000434503 NDUFC1O43677 76 aa9.14□□□□□ -0.95
LMBR1-210ENST00000434503 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
LMBR1-210ENST00000434503 KMT2DO14686 5537 aa9.12□□□□□ -0.95
LMBR1-210ENST00000434503 ACYP2P14621 99 aa9.11□□□□□ -0.95
LMBR1-210ENST00000434503 MDN1Q9NU22 5596 aa9.04□□□□□ -0.96
LMBR1-210ENST00000434503 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
LMBR1-210ENST00000434503 H0YAA0 97 aa9.01□□□□□ -0.97
LMBR1-210ENST00000434503 H7BZZ5 65 aa8.99□□□□□ -0.97
LMBR1-210ENST00000434503 KRTAP2-3P0C7H8 128 aa8.99□□□□□ -0.97
LMBR1-210ENST00000434503 KRTAP2-4Q9BYR9 128 aa8.99□□□□□ -0.97
LMBR1-210ENST00000434503 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
LMBR1-210ENST00000434503 SPTSSBQ8NFR3 76 aa8.92□□□□□ -0.98
LMBR1-210ENST00000434503 CCDC179H3BU77 68 aa8.9□□□□□ -0.98
LMBR1-210ENST00000434503 CHKB-CPT1BH3BT56 60 aa8.86□□□□□ -0.99
LMBR1-210ENST00000434503 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
LMBR1-210ENST00000434503 PCP4P48539 62 aa8.85□□□□□ -0.99
LMBR1-210ENST00000434503 SPRR2FQ96RM1 72 aa8.83□□□□□ -1
LMBR1-210ENST00000434503 SPRR2EP22531 72 aa8.81□□□□□ -1
LMBR1-210ENST00000434503 SPRR2BP35325 72 aa8.81□□□□□ -1
LMBR1-210ENST00000434503 SPRR2AP35326 72 aa8.81□□□□□ -1
LMBR1-210ENST00000434503 COA5Q86WW8 74 aa8.78□□□□□ -1
LMBR1-210ENST00000434503 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
LMBR1-210ENST00000434503 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
LMBR1-210ENST00000434503 TMEM258P61165 79 aa8.67□□□□□ -1.02
LMBR1-210ENST00000434503 MT1XP80297 61 aa8.67□□□□□ -1.02
LMBR1-210ENST00000434503 KRTAP2-2Q9BYT5 123 aa8.67□□□□□ -1.02
LMBR1-210ENST00000434503 KRTAP2-1Q9BYU5 128 aa8.67□□□□□ -1.02
LMBR1-210ENST00000434503 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
LMBR1-210ENST00000434503 P0C880 135 aa8.65□□□□□ -1.02
LMBR1-210ENST00000434503 LCE1AQ5T7P2 110 aa8.65□□□□□ -1.02
LMBR1-210ENST00000434503 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
LMBR1-210ENST00000434503 R4GN34 69 aa8.63□□□□□ -1.03
LMBR1-210ENST00000434503 M0QZ58 72 aa8.56□□□□□ -1.04
LMBR1-210ENST00000434503 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
LMBR1-210ENST00000434503 SPRR2DP22532 72 aa8.52□□□□□ -1.05
LMBR1-210ENST00000434503 SEC61GP60059 68 aa8.49□□□□□ -1.05
LMBR1-210ENST00000434503 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
LMBR1-210ENST00000434503 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
LMBR1-210ENST00000434503 SERP1Q9Y6X1 66 aa8.46□□□□□ -1.06
LMBR1-210ENST00000434503 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
LMBR1-210ENST00000434503 A0A1B0GU69 56 aa8.33□□□□□ -1.08
LMBR1-210ENST00000434503 LCE3BQ5TA77 95 aa8.33□□□□□ -1.08
LMBR1-210ENST00000434503 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
LMBR1-210ENST00000434503 A0A1B0GU33 70 aa8.29□□□□□ -1.08
LMBR1-210ENST00000434503 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
LMBR1-210ENST00000434503 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
LMBR1-210ENST00000434503 PRR15LQ9BU68 103 aa8.26□□□□□ -1.09
LMBR1-210ENST00000434503 KRTAP10-12P60413 245 aa8.23□□□□□ -1.09
LMBR1-210ENST00000434503 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
LMBR1-210ENST00000434503 V9GYY9 64 aa8.15□□□□□ -1.1
LMBR1-210ENST00000434503 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
LMBR1-210ENST00000434503 Q1T7F1 81 aa8.11□□□□□ -1.11
LMBR1-210ENST00000434503 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
LMBR1-210ENST00000434503 GPR98Q8WXG9 6306 aa8.07□□□□□ -1.12
LMBR1-210ENST00000434503 KRTAP4-12Q9BQ66 201 aa8.03□□□□□ -1.12
LMBR1-210ENST00000434503 DSTQ03001 7570 aaKnown RBP8.02□□□□□ -1.13
LMBR1-210ENST00000434503 A0A0D9SG42 100 aa8.01□□□□□ -1.13
LMBR1-210ENST00000434503 UQCR11O14957 56 aa8.01□□□□□ -1.13
LMBR1-210ENST00000434503 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
LMBR1-210ENST00000434503 KRTAP9-9Q9BYP9 154 aa7.95□□□□□ -1.14
LMBR1-210ENST00000434503 KRTAP9-4Q9BYQ2 154 aa7.95□□□□□ -1.14
LMBR1-210ENST00000434503 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
LMBR1-210ENST00000434503 A8MU10 97 aa7.91□□□□□ -1.14
LMBR1-210ENST00000434503 PSPHP1O15172 72 aa7.89□□□□□ -1.15
LMBR1-210ENST00000434503 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
LMBR1-210ENST00000434503 KRTAP4-9Q9BYQ8 210 aa7.88□□□□□ -1.15
LMBR1-210ENST00000434503 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms