RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
HLA-B-250ENST00000434333 NEBP20929 6669 aa8.89□□□□□ -0.99
HLA-B-250ENST00000434333 A0A087WVE0 104 aa8.89□□□□□ -0.99
HLA-B-250ENST00000434333 MUC12Q9UKN1 5478 aa8.88□□□□□ -0.99
HLA-B-250ENST00000434333 ATP5EP2Q5VTU8 51 aa8.85□□□□□ -0.99
HLA-B-250ENST00000434333 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
HLA-B-250ENST00000434333 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
HLA-B-250ENST00000434333 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
HLA-B-250ENST00000434333 LINC00643Q86TS7 51 aa8.78□□□□□ -1
HLA-B-250ENST00000434333 CRIPTQ9P021 101 aa8.77□□□□□ -1.01
HLA-B-250ENST00000434333 KRTAP5-9P26371 169 aa8.72□□□□□ -1.01
HLA-B-250ENST00000434333 IMUPQ9GZP8 106 aa8.71□□□□□ -1.02
HLA-B-250ENST00000434333 H0YAA0 97 aa8.67□□□□□ -1.02
HLA-B-250ENST00000434333 UQCRQO14949 82 aa8.67□□□□□ -1.02
HLA-B-250ENST00000434333 H0Y9P7 68 aa8.66□□□□□ -1.02
HLA-B-250ENST00000434333 NDUFC1O43677 76 aa8.65□□□□□ -1.02
HLA-B-250ENST00000434333 KMT2DO14686 5537 aa8.64□□□□□ -1.03
HLA-B-250ENST00000434333 ATOX1O00244 68 aa8.63□□□□□ -1.03
HLA-B-250ENST00000434333 KRTAP20-1Q3LI63 56 aa8.58□□□□□ -1.04
HLA-B-250ENST00000434333 MDN1Q9NU22 5596 aa8.58□□□□□ -1.04
HLA-B-250ENST00000434333 A8MUN3 132 aa8.56□□□□□ -1.04
HLA-B-250ENST00000434333 ADM2Q7Z4H4 148 aa8.55□□□□□ -1.04
HLA-B-250ENST00000434333 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
HLA-B-250ENST00000434333 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
HLA-B-250ENST00000434333 OCR1Q9BZK8 76 aa8.5□□□□□ -1.05
HLA-B-250ENST00000434333 MT1XP80297 61 aa8.48□□□□□ -1.05
HLA-B-250ENST00000434333 MP68P56378 58 aa8.45□□□□□ -1.06
HLA-B-250ENST00000434333 MT-ATP8P03928 68 aa8.44□□□□□ -1.06
HLA-B-250ENST00000434333 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
HLA-B-250ENST00000434333 PCP4P48539 62 aa8.38□□□□□ -1.07
HLA-B-250ENST00000434333 SPRR2FQ96RM1 72 aa8.38□□□□□ -1.07
HLA-B-250ENST00000434333 P0C880 135 aa8.37□□□□□ -1.07
HLA-B-250ENST00000434333 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
HLA-B-250ENST00000434333 H3BPC8 53 aa8.34□□□□□ -1.07
HLA-B-250ENST00000434333 R4GN34 69 aa8.33□□□□□ -1.08
HLA-B-250ENST00000434333 KRTAP2-3P0C7H8 128 aa8.3□□□□□ -1.08
HLA-B-250ENST00000434333 KRTAP2-4Q9BYR9 128 aa8.3□□□□□ -1.08
HLA-B-250ENST00000434333 SPRR2EP22531 72 aa8.29□□□□□ -1.08
HLA-B-250ENST00000434333 SPRR2BP35325 72 aa8.29□□□□□ -1.08
HLA-B-250ENST00000434333 SPRR2AP35326 72 aa8.29□□□□□ -1.08
HLA-B-250ENST00000434333 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
HLA-B-250ENST00000434333 DMAC1Q96GE9 116 aa8.29□□□□□ -1.08
HLA-B-250ENST00000434333 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
HLA-B-250ENST00000434333 KRTAP8-1Q8IUC2 63 aa8.28□□□□□ -1.08
HLA-B-250ENST00000434333 M0QZ58 72 aa8.27□□□□□ -1.09
HLA-B-250ENST00000434333 C20orf197Q8N268 126 aa8.27□□□□□ -1.09
HLA-B-250ENST00000434333 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
HLA-B-250ENST00000434333 TRAV7A0A075B6U4 112 aa8.23□□□□□ -1.09
HLA-B-250ENST00000434333 LCE1AQ5T7P2 110 aa8.2□□□□□ -1.1
HLA-B-250ENST00000434333 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
HLA-B-250ENST00000434333 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
HLA-B-250ENST00000434333 ANAPC13Q9BS18 74 aa8.18□□□□□ -1.1
HLA-B-250ENST00000434333 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
HLA-B-250ENST00000434333 KRTAP10-7P60409 375 aaPredicted RBP8.09□□□□□ -1.11
HLA-B-250ENST00000434333 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
HLA-B-250ENST00000434333 COX7CP15954 63 aa8.04□□□□□ -1.12
HLA-B-250ENST00000434333 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
HLA-B-250ENST00000434333 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
HLA-B-250ENST00000434333 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
HLA-B-250ENST00000434333 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
HLA-B-250ENST00000434333 SPRR2DP22532 72 aa8.02□□□□□ -1.13
HLA-B-250ENST00000434333 ACYP2P14621 99 aa8□□□□□ -1.13
HLA-B-250ENST00000434333 CCDC179H3BU77 68 aa7.96□□□□□ -1.14
HLA-B-250ENST00000434333 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
HLA-B-250ENST00000434333 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
HLA-B-250ENST00000434333 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
HLA-B-250ENST00000434333 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
HLA-B-250ENST00000434333 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
HLA-B-250ENST00000434333 TMEM258P61165 79 aa7.76□□□□□ -1.17
HLA-B-250ENST00000434333 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
HLA-B-250ENST00000434333 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
HLA-B-250ENST00000434333 H7BZZ5 65 aa7.69□□□□□ -1.18
HLA-B-250ENST00000434333 COA5Q86WW8 74 aa7.66□□□□□ -1.18
HLA-B-250ENST00000434333 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
HLA-B-250ENST00000434333 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
HLA-B-250ENST00000434333 GPR98Q8WXG9 6306 aa7.6□□□□□ -1.19
HLA-B-250ENST00000434333 KRTAP19-7Q3SYF9 63 aa7.59□□□□□ -1.19
HLA-B-250ENST00000434333 LCE5AQ5TCM9 118 aa7.55□□□□□ -1.2
HLA-B-250ENST00000434333 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
HLA-B-250ENST00000434333 MT1EP04732 61 aa7.52□□□□□ -1.21
HLA-B-250ENST00000434333 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
HLA-B-250ENST00000434333 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
HLA-B-250ENST00000434333 SEC61GP60059 68 aa7.47□□□□□ -1.21
HLA-B-250ENST00000434333 A0A0D9SG42 100 aa7.43□□□□□ -1.22
HLA-B-250ENST00000434333 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.22
HLA-B-250ENST00000434333 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
HLA-B-250ENST00000434333 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
HLA-B-250ENST00000434333 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
HLA-B-250ENST00000434333 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
HLA-B-250ENST00000434333 A0A1B0GU33 70 aa7.32□□□□□ -1.24
HLA-B-250ENST00000434333 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
HLA-B-250ENST00000434333 A0A1B0GU69 56 aa7.27□□□□□ -1.25
HLA-B-250ENST00000434333 MT1GP13640 62 aa7.27□□□□□ -1.25
HLA-B-250ENST00000434333 V9GYY9 64 aa7.27□□□□□ -1.25
HLA-B-250ENST00000434333 Q1T7F1 81 aa7.18□□□□□ -1.26
HLA-B-250ENST00000434333 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
HLA-B-250ENST00000434333 MT1MQ8N339 61 aa7.17□□□□□ -1.26
HLA-B-250ENST00000434333 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
HLA-B-250ENST00000434333 MT1LQ93083 61 aa7.15□□□□□ -1.26
HLA-B-250ENST00000434333 PRR15LQ9BU68 103 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms