RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 A8MUN3 132 aa7.42□□□□□ -1.22
CNOT9-205ENST00000433439 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
CNOT9-205ENST00000433439 LCA10Q71F78 164 aa7.41□□□□□ -1.22
CNOT9-205ENST00000433439 DMAC1Q96GE9 116 aa7.37□□□□□ -1.23
CNOT9-205ENST00000433439 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
CNOT9-205ENST00000433439 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
CNOT9-205ENST00000433439 CYSTM1Q9H1C7 97 aa7.32□□□□□ -1.24
CNOT9-205ENST00000433439 NDUFC1O43677 76 aa7.31□□□□□ -1.24
CNOT9-205ENST00000433439 ACYP2P14621 99 aa7.31□□□□□ -1.24
CNOT9-205ENST00000433439 SPANXA2-OT1Q8N9U9 137 aa7.31□□□□□ -1.24
CNOT9-205ENST00000433439 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
CNOT9-205ENST00000433439 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
CNOT9-205ENST00000433439 H7BZZ5 65 aa7.27□□□□□ -1.25
CNOT9-205ENST00000433439 MT2AP02795 61 aa7.27□□□□□ -1.25
CNOT9-205ENST00000433439 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
CNOT9-205ENST00000433439 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
CNOT9-205ENST00000433439 MT1FP04733 61 aa7.22□□□□□ -1.25
CNOT9-205ENST00000433439 COA5Q86WW8 74 aa7.13□□□□□ -1.27
CNOT9-205ENST00000433439 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
CNOT9-205ENST00000433439 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
CNOT9-205ENST00000433439 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
CNOT9-205ENST00000433439 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
CNOT9-205ENST00000433439 H0YAA0 97 aa7.04□□□□□ -1.28
CNOT9-205ENST00000433439 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
CNOT9-205ENST00000433439 TMEM258P61165 79 aa7.03□□□□□ -1.28
CNOT9-205ENST00000433439 PCP4P48539 62 aa7.02□□□□□ -1.29
CNOT9-205ENST00000433439 USH2AO75445 5202 aa7.01□□□□□ -1.29
CNOT9-205ENST00000433439 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
CNOT9-205ENST00000433439 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
CNOT9-205ENST00000433439 P0C880 135 aa6.97□□□□□ -1.29
CNOT9-205ENST00000433439 LCE2BO14633 110 aa6.95□□□□□ -1.3
CNOT9-205ENST00000433439 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
CNOT9-205ENST00000433439 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
CNOT9-205ENST00000433439 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
CNOT9-205ENST00000433439 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
CNOT9-205ENST00000433439 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
CNOT9-205ENST00000433439 SEC61GP60059 68 aa6.86□□□□□ -1.31
CNOT9-205ENST00000433439 R4GN34 69 aa6.86□□□□□ -1.31
CNOT9-205ENST00000433439 M0QZ58 72 aa6.84□□□□□ -1.31
CNOT9-205ENST00000433439 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
CNOT9-205ENST00000433439 Q5VV11 94 aa6.78□□□□□ -1.32
CNOT9-205ENST00000433439 A0A1B0GU69 56 aa6.77□□□□□ -1.33
CNOT9-205ENST00000433439 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
CNOT9-205ENST00000433439 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
CNOT9-205ENST00000433439 KRTAP6-3Q3LI67 103 aa6.74□□□□□ -1.33
CNOT9-205ENST00000433439 MT1BP07438 61 aa6.73□□□□□ -1.33
CNOT9-205ENST00000433439 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
CNOT9-205ENST00000433439 A0A1B0GU33 70 aa6.68□□□□□ -1.34
CNOT9-205ENST00000433439 PRR15LQ9BU68 103 aa6.68□□□□□ -1.34
CNOT9-205ENST00000433439 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
CNOT9-205ENST00000433439 KRTAP20-1Q3LI63 56 aa6.63□□□□□ -1.35
CNOT9-205ENST00000433439 SPATA8Q6RVD6 105 aa6.63□□□□□ -1.35
CNOT9-205ENST00000433439 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
CNOT9-205ENST00000433439 NEBP20929 6669 aa6.62□□□□□ -1.35
CNOT9-205ENST00000433439 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
CNOT9-205ENST00000433439 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
CNOT9-205ENST00000433439 A0A0D9SG42 100 aa6.59□□□□□ -1.35
CNOT9-205ENST00000433439 V9GYY9 64 aa6.57□□□□□ -1.36
CNOT9-205ENST00000433439 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
CNOT9-205ENST00000433439 A6NN06 94 aa6.53□□□□□ -1.36
CNOT9-205ENST00000433439 PSPHP1O15172 72 aa6.53□□□□□ -1.36
CNOT9-205ENST00000433439 Q1T7F1 81 aa6.53□□□□□ -1.36
CNOT9-205ENST00000433439 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
CNOT9-205ENST00000433439 A8MU10 97 aa6.47□□□□□ -1.37
CNOT9-205ENST00000433439 UQCR11O14957 56 aa6.46□□□□□ -1.38
CNOT9-205ENST00000433439 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
CNOT9-205ENST00000433439 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
CNOT9-205ENST00000433439 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
CNOT9-205ENST00000433439 MT1XP80297 61 aa6.41□□□□□ -1.38
CNOT9-205ENST00000433439 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
CNOT9-205ENST00000433439 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
CNOT9-205ENST00000433439 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
CNOT9-205ENST00000433439 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
CNOT9-205ENST00000433439 A6NED7 52 aa6.32□□□□□ -1.4
CNOT9-205ENST00000433439 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
CNOT9-205ENST00000433439 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
CNOT9-205ENST00000433439 K7ERS5 55 aa6.18□□□□□ -1.42
CNOT9-205ENST00000433439 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
CNOT9-205ENST00000433439 KMT2DO14686 5537 aa6.16□□□□□ -1.42
CNOT9-205ENST00000433439 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
CNOT9-205ENST00000433439 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
CNOT9-205ENST00000433439 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
CNOT9-205ENST00000433439 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
CNOT9-205ENST00000433439 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
CNOT9-205ENST00000433439 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
CNOT9-205ENST00000433439 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
CNOT9-205ENST00000433439 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
CNOT9-205ENST00000433439 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
CNOT9-205ENST00000433439 KRTAP2-1Q9BYU5 128 aa6□□□□□ -1.45
CNOT9-205ENST00000433439 TNP1P09430 55 aa5.99□□□□□ -1.45
CNOT9-205ENST00000433439 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
CNOT9-205ENST00000433439 GPR98Q8WXG9 6306 aa5.9□□□□□ -1.47
CNOT9-205ENST00000433439 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
CNOT9-205ENST00000433439 SPRR2EP22531 72 aa5.84□□□□□ -1.47
CNOT9-205ENST00000433439 SPRR2BP35325 72 aa5.84□□□□□ -1.47
CNOT9-205ENST00000433439 SPRR2AP35326 72 aa5.84□□□□□ -1.47
CNOT9-205ENST00000433439 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
CNOT9-205ENST00000433439 ROMO1P60602 79 aa5.82□□□□□ -1.48
CNOT9-205ENST00000433439 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
CNOT9-205ENST00000433439 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms