RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
VTI1A-202ENST00000432306 UBE2DNLQ8IWF7 75 aa4.69□□□□□ -1.66
VTI1A-202ENST00000432306 SPACA4Q8TDM5 124 aa4.69□□□□□ -1.66
VTI1A-202ENST00000432306 PANO1I0J062 215 aa4.68□□□□□ -1.66
VTI1A-202ENST00000432306 Q5W150 140 aa4.67□□□□□ -1.66
VTI1A-202ENST00000432306 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
VTI1A-202ENST00000432306 LRP1BQ9NZR2 4599 aa4.66□□□□□ -1.66
VTI1A-202ENST00000432306 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.67
VTI1A-202ENST00000432306 ZNF861PO60384 105 aa4.64□□□□□ -1.67
VTI1A-202ENST00000432306 C20orf166-AS1Q96NR2 134 aa4.64□□□□□ -1.67
VTI1A-202ENST00000432306 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
VTI1A-202ENST00000432306 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
VTI1A-202ENST00000432306 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
VTI1A-202ENST00000432306 NBDYA0A0U1RRE5 68 aa4.62□□□□□ -1.67
VTI1A-202ENST00000432306 DNAH5Q8TE73 4624 aa4.62□□□□□ -1.67
VTI1A-202ENST00000432306 A0A1B0GU69 56 aa4.61□□□□□ -1.67
VTI1A-202ENST00000432306 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
VTI1A-202ENST00000432306 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
VTI1A-202ENST00000432306 UQCR11O14957 56 aa4.6□□□□□ -1.67
VTI1A-202ENST00000432306 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
VTI1A-202ENST00000432306 SSBP3-AS1Q7Z2R9 100 aa4.6□□□□□ -1.67
VTI1A-202ENST00000432306 PSORS1C2Q9UIG4 136 aa4.6□□□□□ -1.67
VTI1A-202ENST00000432306 Q5VSD8 79 aa4.58□□□□□ -1.68
VTI1A-202ENST00000432306 TYMSOSQ8TAI1 123 aa4.58□□□□□ -1.68
VTI1A-202ENST00000432306 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
VTI1A-202ENST00000432306 SRRM2Q9UQ35 2752 aaKnown RBP4.57□□□□□ -1.68
VTI1A-202ENST00000432306 A0A1B0GU33 70 aa4.57□□□□□ -1.68
VTI1A-202ENST00000432306 A0A087WTM6 91 aa4.55□□□□□ -1.68
VTI1A-202ENST00000432306 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
VTI1A-202ENST00000432306 P0C880 135 aa4.54□□□□□ -1.68
VTI1A-202ENST00000432306 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
VTI1A-202ENST00000432306 MYCBP2O75592 4640 aa4.54□□□□□ -1.68
VTI1A-202ENST00000432306 SPINK6Q6UWN8 80 aa4.52□□□□□ -1.69
VTI1A-202ENST00000432306 ANAPC11Q9NYG5 84 aa4.52□□□□□ -1.69
VTI1A-202ENST00000432306 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
VTI1A-202ENST00000432306 FAT1Q14517 4588 aa4.51□□□□□ -1.69
VTI1A-202ENST00000432306 SMR3BP02814 79 aaPredicted RBP4.49□□□□□ -1.69
VTI1A-202ENST00000432306 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
VTI1A-202ENST00000432306 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
VTI1A-202ENST00000432306 KRTAP10-1P60331 282 aa4.46□□□□□ -1.7
VTI1A-202ENST00000432306 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
VTI1A-202ENST00000432306 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
VTI1A-202ENST00000432306 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
VTI1A-202ENST00000432306 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
VTI1A-202ENST00000432306 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
VTI1A-202ENST00000432306 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
VTI1A-202ENST00000432306 Q6ZSA8 131 aa4.39□□□□□ -1.71
VTI1A-202ENST00000432306 H0YAA0 97 aa4.38□□□□□ -1.71
VTI1A-202ENST00000432306 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
VTI1A-202ENST00000432306 SPINK1P00995 79 aa4.36□□□□□ -1.71
VTI1A-202ENST00000432306 LINC00304Q8N9R0 145 aa4.35□□□□□ -1.71
VTI1A-202ENST00000432306 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
VTI1A-202ENST00000432306 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
VTI1A-202ENST00000432306 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
VTI1A-202ENST00000432306 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
VTI1A-202ENST00000432306 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
VTI1A-202ENST00000432306 KRTAP10-4P60372 401 aaPredicted RBP4.3□□□□□ -1.72
VTI1A-202ENST00000432306 R4GN34 69 aa4.3□□□□□ -1.72
VTI1A-202ENST00000432306 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
VTI1A-202ENST00000432306 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
VTI1A-202ENST00000432306 LRP2P98164 4655 aa4.27□□□□□ -1.73
VTI1A-202ENST00000432306 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
VTI1A-202ENST00000432306 TNXBP22105 4242 aa4.23□□□□□ -1.73
VTI1A-202ENST00000432306 COX6B2Q6YFQ2 88 aa4.21□□□□□ -1.73
VTI1A-202ENST00000432306 RPL37P61927 97 aaKnown RBP4.16□□□□□ -1.74
VTI1A-202ENST00000432306 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.74
VTI1A-202ENST00000432306 KRTAP10-8P60410 259 aa4.09□□□□□ -1.75
VTI1A-202ENST00000432306 C9orf92A6NGG3 77 aa4.09□□□□□ -1.76
VTI1A-202ENST00000432306 TPRXLQ17RH7 258 aa4.09□□□□□ -1.76
VTI1A-202ENST00000432306 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.76
VTI1A-202ENST00000432306 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
VTI1A-202ENST00000432306 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
VTI1A-202ENST00000432306 LPAP08519 4548 aa4.05□□□□□ -1.76
VTI1A-202ENST00000432306 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
VTI1A-202ENST00000432306 MUC2Q02817 5179 aa4□□□□□ -1.77
VTI1A-202ENST00000432306 S4R3F8 94 aa4□□□□□ -1.77
VTI1A-202ENST00000432306 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
VTI1A-202ENST00000432306 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
VTI1A-202ENST00000432306 A0A0D9SG42 100 aa3.95□□□□□ -1.78
VTI1A-202ENST00000432306 M0QZ58 72 aa3.95□□□□□ -1.78
VTI1A-202ENST00000432306 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
VTI1A-202ENST00000432306 INE1O15225 51 aa3.94□□□□□ -1.78
VTI1A-202ENST00000432306 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
VTI1A-202ENST00000432306 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
VTI1A-202ENST00000432306 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
VTI1A-202ENST00000432306 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
VTI1A-202ENST00000432306 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
VTI1A-202ENST00000432306 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
VTI1A-202ENST00000432306 MT3P25713 68 aa3.73□□□□□ -1.81
VTI1A-202ENST00000432306 KRTAP4-1Q9BYQ7 146 aa3.68□□□□□ -1.82
VTI1A-202ENST00000432306 MT1HP80294 61 aa3.64□□□□□ -1.83
VTI1A-202ENST00000432306 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
VTI1A-202ENST00000432306 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
VTI1A-202ENST00000432306 M0R2T5 61 aa3.59□□□□□ -1.83
VTI1A-202ENST00000432306 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
VTI1A-202ENST00000432306 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
VTI1A-202ENST00000432306 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
VTI1A-202ENST00000432306 TNP1P09430 55 aa3.47□□□□□ -1.85
VTI1A-202ENST00000432306 USH2AO75445 5202 aa3.46□□□□□ -1.86
VTI1A-202ENST00000432306 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms