RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 APOBP04114 4563 aaKnown RBP2.33□□□□□ -2.04
UBE4A-202ENST00000431736 Q5W150 140 aa2.33□□□□□ -2.04
UBE4A-202ENST00000431736 COA5Q86WW8 74 aa2.33□□□□□ -2.04
UBE4A-202ENST00000431736 FAT1Q14517 4588 aa2.32□□□□□ -2.04
UBE4A-202ENST00000431736 Q5VV11 94 aa2.32□□□□□ -2.04
UBE4A-202ENST00000431736 CRIPTQ9P021 101 aa2.32□□□□□ -2.04
UBE4A-202ENST00000431736 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
UBE4A-202ENST00000431736 A6NN06 94 aa2.31□□□□□ -2.04
UBE4A-202ENST00000431736 KRTAP10-6P60371 365 aaPredicted RBP2.31□□□□□ -2.04
UBE4A-202ENST00000431736 HERC1Q15751 4861 aa2.31□□□□□ -2.04
UBE4A-202ENST00000431736 UQCR11O14957 56 aa2.3□□□□□ -2.04
UBE4A-202ENST00000431736 MT1HP80294 61 aa2.3□□□□□ -2.04
UBE4A-202ENST00000431736 NOTCH2NLQ7Z3S9 236 aa2.3□□□□□ -2.04
UBE4A-202ENST00000431736 H7BZZ5 65 aa2.29□□□□□ -2.04
UBE4A-202ENST00000431736 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
UBE4A-202ENST00000431736 M0QZ58 72 aa2.29□□□□□ -2.04
UBE4A-202ENST00000431736 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
UBE4A-202ENST00000431736 MYCBP2O75592 4640 aa2.28□□□□□ -2.04
UBE4A-202ENST00000431736 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
UBE4A-202ENST00000431736 LUZP6Q538Z0 58 aa2.28□□□□□ -2.05
UBE4A-202ENST00000431736 ADM2Q7Z4H4 148 aa2.27□□□□□ -2.05
UBE4A-202ENST00000431736 Q1T7F1 81 aa2.27□□□□□ -2.05
UBE4A-202ENST00000431736 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 LYSTQ99698 3801 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 FRAS1Q86XX4 4008 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 KLKP1Q107X0 134 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 SPANXA2-OT1Q8N9U9 137 aa2.26□□□□□ -2.05
UBE4A-202ENST00000431736 A0A1B0GU33 70 aa2.25□□□□□ -2.05
UBE4A-202ENST00000431736 VPS13BQ7Z7G8 4022 aa2.25□□□□□ -2.05
UBE4A-202ENST00000431736 OCR1Q9BZK8 76 aa2.24□□□□□ -2.05
UBE4A-202ENST00000431736 CDC42SE1Q9NRR8 79 aa2.23□□□□□ -2.05
UBE4A-202ENST00000431736 LORP23490 312 aaPredicted RBP2.23□□□□□ -2.05
UBE4A-202ENST00000431736 FAT3Q8TDW7 4589 aa2.22□□□□□ -2.05
UBE4A-202ENST00000431736 PKHD1P08F94 4074 aa2.22□□□□□ -2.05
UBE4A-202ENST00000431736 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
UBE4A-202ENST00000431736 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
UBE4A-202ENST00000431736 LCE2AQ5TA79 106 aaPredicted RBP2.21□□□□□ -2.06
UBE4A-202ENST00000431736 A8MU10 97 aa2.2□□□□□ -2.06
UBE4A-202ENST00000431736 PKD1P98161 4303 aa2.2□□□□□ -2.06
UBE4A-202ENST00000431736 LCE2BO14633 110 aa2.19□□□□□ -2.06
UBE4A-202ENST00000431736 ROMO1P60602 79 aa2.19□□□□□ -2.06
UBE4A-202ENST00000431736 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
UBE4A-202ENST00000431736 KRTAP23-1A1A580 65 aa2.17□□□□□ -2.06
UBE4A-202ENST00000431736 MT2AP02795 61 aa2.15□□□□□ -2.06
UBE4A-202ENST00000431736 LRP1Q07954 4544 aaKnown RBP2.15□□□□□ -2.07
UBE4A-202ENST00000431736 LRP2P98164 4655 aa2.13□□□□□ -2.07
UBE4A-202ENST00000431736 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
UBE4A-202ENST00000431736 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
UBE4A-202ENST00000431736 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
UBE4A-202ENST00000431736 KRTAP19-1Q8IUB9 90 aa2.11□□□□□ -2.07
UBE4A-202ENST00000431736 SPATA8Q6RVD6 105 aa2.1□□□□□ -2.07
UBE4A-202ENST00000431736 UBR4Q5T4S7 5183 aa2.1□□□□□ -2.07
UBE4A-202ENST00000431736 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
UBE4A-202ENST00000431736 H0YAA0 97 aa2.09□□□□□ -2.07
UBE4A-202ENST00000431736 MT1FP04733 61 aa2.09□□□□□ -2.07
UBE4A-202ENST00000431736 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.09□□□□□ -2.07
UBE4A-202ENST00000431736 LCE2CQ5TA81 110 aa2.09□□□□□ -2.08
UBE4A-202ENST00000431736 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.08
UBE4A-202ENST00000431736 TNP1P09430 55 aa2.08□□□□□ -2.08
UBE4A-202ENST00000431736 P0C880 135 aa2.06□□□□□ -2.08
UBE4A-202ENST00000431736 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
UBE4A-202ENST00000431736 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
UBE4A-202ENST00000431736 TNXBP22105 4242 aa2.04□□□□□ -2.08
UBE4A-202ENST00000431736 SPRR2EP22531 72 aa2.04□□□□□ -2.08
UBE4A-202ENST00000431736 SPRR2BP35325 72 aa2.04□□□□□ -2.08
UBE4A-202ENST00000431736 SPRR2AP35326 72 aa2.04□□□□□ -2.08
UBE4A-202ENST00000431736 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
UBE4A-202ENST00000431736 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
UBE4A-202ENST00000431736 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.09
UBE4A-202ENST00000431736 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
UBE4A-202ENST00000431736 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
UBE4A-202ENST00000431736 KRTAP19-6Q3LI70 58 aa2.01□□□□□ -2.09
UBE4A-202ENST00000431736 KRTAP9-3Q9BYQ3 159 aa2□□□□□ -2.09
UBE4A-202ENST00000431736 PP632Q6XCG6 107 aa2□□□□□ -2.09
UBE4A-202ENST00000431736 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
UBE4A-202ENST00000431736 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
UBE4A-202ENST00000431736 SPRR2DP22532 72 aa1.99□□□□□ -2.09
UBE4A-202ENST00000431736 LPAP08519 4548 aa1.97□□□□□ -2.09
UBE4A-202ENST00000431736 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
UBE4A-202ENST00000431736 KRTAP10-5P60370 271 aa1.96□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP3-1Q9BYR8 98 aa1.95□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
UBE4A-202ENST00000431736 KRTAP19-4Q3LI73 84 aa1.91□□□□□ -2.1
UBE4A-202ENST00000431736 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
UBE4A-202ENST00000431736 C10orf95Q9H7T3 257 aa1.88□□□□□ -2.11
UBE4A-202ENST00000431736 KRTAP15-1Q3LI76 137 aa1.88□□□□□ -2.11
UBE4A-202ENST00000431736 MT1BP07438 61 aa1.86□□□□□ -2.11
UBE4A-202ENST00000431736 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
UBE4A-202ENST00000431736 KRTAP10-7P60409 375 aaPredicted RBP1.86□□□□□ -2.11
UBE4A-202ENST00000431736 KRTAP2-2Q9BYT5 123 aa1.86□□□□□ -2.11
UBE4A-202ENST00000431736 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
UBE4A-202ENST00000431736 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
UBE4A-202ENST00000431736 LCE3BQ5TA77 95 aa1.84□□□□□ -2.11
UBE4A-202ENST00000431736 KRTAP12-2P59991 146 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms