RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
TTC28-202ENST00000431039 FAM236DA0A1B0GTK5 79 aa8.24□□□□□ -1.09
TTC28-202ENST00000431039 FAM236CP0DP71 79 aa8.24□□□□□ -1.09
TTC28-202ENST00000431039 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
TTC28-202ENST00000431039 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
TTC28-202ENST00000431039 FCGBPQ9Y6R7 5405 aaPredicted RBP8.2□□□□□ -1.1
TTC28-202ENST00000431039 H7BZZ5 65 aa8.2□□□□□ -1.1
TTC28-202ENST00000431039 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
TTC28-202ENST00000431039 A8MUN3 132 aa8.18□□□□□ -1.1
TTC28-202ENST00000431039 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
TTC28-202ENST00000431039 PCP4P48539 62 aa8.15□□□□□ -1.1
TTC28-202ENST00000431039 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
TTC28-202ENST00000431039 MT2AP02795 61 aa8.12□□□□□ -1.11
TTC28-202ENST00000431039 MT1FP04733 61 aa8.07□□□□□ -1.12
TTC28-202ENST00000431039 LCE2BO14633 110 aa8.06□□□□□ -1.12
TTC28-202ENST00000431039 ACYP2P14621 99 aa8.06□□□□□ -1.12
TTC28-202ENST00000431039 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
TTC28-202ENST00000431039 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
TTC28-202ENST00000431039 MACF1Q9UPN3 7388 aaKnown RBP8.03□□□□□ -1.12
TTC28-202ENST00000431039 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
TTC28-202ENST00000431039 TMEM258P61165 79 aa8.02□□□□□ -1.13
TTC28-202ENST00000431039 S4R3F8 94 aa8.02□□□□□ -1.13
TTC28-202ENST00000431039 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
TTC28-202ENST00000431039 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
TTC28-202ENST00000431039 LCA10Q71F78 164 aa7.97□□□□□ -1.13
TTC28-202ENST00000431039 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
TTC28-202ENST00000431039 COA5Q86WW8 74 aa7.91□□□□□ -1.14
TTC28-202ENST00000431039 CHKB-CPT1BH3BT56 60 aa7.9□□□□□ -1.14
TTC28-202ENST00000431039 CSAG1Q6PB30 78 aa7.9□□□□□ -1.14
TTC28-202ENST00000431039 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
TTC28-202ENST00000431039 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
TTC28-202ENST00000431039 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
TTC28-202ENST00000431039 H0YAA0 97 aa7.72□□□□□ -1.17
TTC28-202ENST00000431039 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
TTC28-202ENST00000431039 KRTAP6-3Q3LI67 103 aa7.63□□□□□ -1.19
TTC28-202ENST00000431039 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
TTC28-202ENST00000431039 NEBP20929 6669 aa7.59□□□□□ -1.19
TTC28-202ENST00000431039 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
TTC28-202ENST00000431039 SEC61GP60059 68 aa7.55□□□□□ -1.2
TTC28-202ENST00000431039 SMIM26A0A096LP01 95 aa7.54□□□□□ -1.2
TTC28-202ENST00000431039 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
TTC28-202ENST00000431039 P0C880 135 aa7.53□□□□□ -1.2
TTC28-202ENST00000431039 CRIPTQ9P021 101 aa7.5□□□□□ -1.21
TTC28-202ENST00000431039 A0A1B0GU69 56 aa7.49□□□□□ -1.21
TTC28-202ENST00000431039 MUC12Q9UKN1 5478 aa7.48□□□□□ -1.21
TTC28-202ENST00000431039 V9GYY9 64 aa7.47□□□□□ -1.21
TTC28-202ENST00000431039 Q1T7F1 81 aa7.46□□□□□ -1.22
TTC28-202ENST00000431039 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
TTC28-202ENST00000431039 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
TTC28-202ENST00000431039 A0A1B0GU33 70 aa7.37□□□□□ -1.23
TTC28-202ENST00000431039 R4GN34 69 aa7.37□□□□□ -1.23
TTC28-202ENST00000431039 A6NN06 94 aa7.36□□□□□ -1.23
TTC28-202ENST00000431039 M0QZ58 72 aa7.36□□□□□ -1.23
TTC28-202ENST00000431039 PSPHP1O15172 72 aa7.3□□□□□ -1.24
TTC28-202ENST00000431039 MT1BP07438 61 aa7.3□□□□□ -1.24
TTC28-202ENST00000431039 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
TTC28-202ENST00000431039 Q5VV11 94 aa7.28□□□□□ -1.24
TTC28-202ENST00000431039 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
TTC28-202ENST00000431039 KRTAP20-1Q3LI63 56 aa7.25□□□□□ -1.25
TTC28-202ENST00000431039 MDN1Q9NU22 5596 aa7.23□□□□□ -1.25
TTC28-202ENST00000431039 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
TTC28-202ENST00000431039 UQCR11O14957 56 aa7.21□□□□□ -1.26
TTC28-202ENST00000431039 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
TTC28-202ENST00000431039 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
TTC28-202ENST00000431039 KMT2DO14686 5537 aa7.19□□□□□ -1.26
TTC28-202ENST00000431039 KRTAP5-9P26371 169 aa7.13□□□□□ -1.27
TTC28-202ENST00000431039 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
TTC28-202ENST00000431039 A0A0D9SG42 100 aa7.1□□□□□ -1.27
TTC28-202ENST00000431039 A6NED7 52 aa7.09□□□□□ -1.27
TTC28-202ENST00000431039 A8MU10 97 aa7.07□□□□□ -1.28
TTC28-202ENST00000431039 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
TTC28-202ENST00000431039 KRTAP12-1P59990 96 aa7□□□□□ -1.29
TTC28-202ENST00000431039 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
TTC28-202ENST00000431039 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
TTC28-202ENST00000431039 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
TTC28-202ENST00000431039 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
TTC28-202ENST00000431039 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
TTC28-202ENST00000431039 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.3
TTC28-202ENST00000431039 SPRR2EP22531 72 aa6.88□□□□□ -1.31
TTC28-202ENST00000431039 SPRR2BP35325 72 aa6.88□□□□□ -1.31
TTC28-202ENST00000431039 SPRR2AP35326 72 aa6.88□□□□□ -1.31
TTC28-202ENST00000431039 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
TTC28-202ENST00000431039 K7ERS5 55 aa6.85□□□□□ -1.31
TTC28-202ENST00000431039 MT1XP80297 61 aa6.84□□□□□ -1.31
TTC28-202ENST00000431039 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
TTC28-202ENST00000431039 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
TTC28-202ENST00000431039 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
TTC28-202ENST00000431039 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.34
TTC28-202ENST00000431039 KRTAP2-2Q9BYT5 123 aa6.7□□□□□ -1.34
TTC28-202ENST00000431039 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
TTC28-202ENST00000431039 SPRR2DP22532 72 aa6.65□□□□□ -1.34
TTC28-202ENST00000431039 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
TTC28-202ENST00000431039 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
TTC28-202ENST00000431039 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
TTC28-202ENST00000431039 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
TTC28-202ENST00000431039 TNP1P09430 55 aa6.51□□□□□ -1.37
TTC28-202ENST00000431039 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
TTC28-202ENST00000431039 ROMO1P60602 79 aa6.51□□□□□ -1.37
TTC28-202ENST00000431039 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
TTC28-202ENST00000431039 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms