RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 Q5VV11 94 aa7.28□□□□□ -1.24
CALD1-207ENST00000430085 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
CALD1-207ENST00000430085 MUC17Q685J3 4493 aa7.26□□□□□ -1.25
CALD1-207ENST00000430085 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
CALD1-207ENST00000430085 A0A1B0GU69 56 aa7.24□□□□□ -1.25
CALD1-207ENST00000430085 H1FX-AS1Q4G0G2 97 aa7.21□□□□□ -1.25
CALD1-207ENST00000430085 S4R3F8 94 aa7.21□□□□□ -1.26
CALD1-207ENST00000430085 MUC2Q02817 5179 aa7.2□□□□□ -1.26
CALD1-207ENST00000430085 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
CALD1-207ENST00000430085 SEC61GP60059 68 aa7.18□□□□□ -1.26
CALD1-207ENST00000430085 LCA10Q71F78 164 aa7.18□□□□□ -1.26
CALD1-207ENST00000430085 A6NED7 52 aa7.16□□□□□ -1.26
CALD1-207ENST00000430085 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
CALD1-207ENST00000430085 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
CALD1-207ENST00000430085 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
CALD1-207ENST00000430085 UQCR11O14957 56 aa7.03□□□□□ -1.28
CALD1-207ENST00000430085 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
CALD1-207ENST00000430085 CSAG1Q6PB30 78 aa7.02□□□□□ -1.29
CALD1-207ENST00000430085 A8MU10 97 aa6.99□□□□□ -1.29
CALD1-207ENST00000430085 A0A1B0GU33 70 aa6.97□□□□□ -1.29
CALD1-207ENST00000430085 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
CALD1-207ENST00000430085 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
CALD1-207ENST00000430085 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
CALD1-207ENST00000430085 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
CALD1-207ENST00000430085 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
CALD1-207ENST00000430085 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
CALD1-207ENST00000430085 ADM2Q7Z4H4 148 aa6.9□□□□□ -1.3
CALD1-207ENST00000430085 H0YAA0 97 aa6.86□□□□□ -1.31
CALD1-207ENST00000430085 P0C880 135 aa6.86□□□□□ -1.31
CALD1-207ENST00000430085 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
CALD1-207ENST00000430085 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
CALD1-207ENST00000430085 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
CALD1-207ENST00000430085 KRTAP13-4Q3LI77 160 aa6.75□□□□□ -1.33
CALD1-207ENST00000430085 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
CALD1-207ENST00000430085 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
CALD1-207ENST00000430085 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
CALD1-207ENST00000430085 M0QZ58 72 aa6.7□□□□□ -1.34
CALD1-207ENST00000430085 A6NN06 94 aa6.7□□□□□ -1.34
CALD1-207ENST00000430085 MT1HP80294 61 aa6.7□□□□□ -1.34
CALD1-207ENST00000430085 A0A0D9SG42 100 aa6.69□□□□□ -1.34
CALD1-207ENST00000430085 K7ERS5 55 aa6.66□□□□□ -1.34
CALD1-207ENST00000430085 R4GN34 69 aa6.66□□□□□ -1.34
CALD1-207ENST00000430085 M0R2T5 61 aa6.64□□□□□ -1.35
CALD1-207ENST00000430085 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
CALD1-207ENST00000430085 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
CALD1-207ENST00000430085 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
CALD1-207ENST00000430085 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
CALD1-207ENST00000430085 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
CALD1-207ENST00000430085 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
CALD1-207ENST00000430085 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
CALD1-207ENST00000430085 MT2AP02795 61 aa6.39□□□□□ -1.39
CALD1-207ENST00000430085 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
CALD1-207ENST00000430085 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
CALD1-207ENST00000430085 ROMO1P60602 79 aa6.37□□□□□ -1.39
CALD1-207ENST00000430085 MT1FP04733 61 aa6.37□□□□□ -1.39
CALD1-207ENST00000430085 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
CALD1-207ENST00000430085 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
CALD1-207ENST00000430085 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
CALD1-207ENST00000430085 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
CALD1-207ENST00000430085 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
CALD1-207ENST00000430085 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
CALD1-207ENST00000430085 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
CALD1-207ENST00000430085 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
CALD1-207ENST00000430085 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
CALD1-207ENST00000430085 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
CALD1-207ENST00000430085 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
CALD1-207ENST00000430085 USH2AO75445 5202 aa6.1□□□□□ -1.43
CALD1-207ENST00000430085 LCE2BO14633 110 aa6.08□□□□□ -1.44
CALD1-207ENST00000430085 MT1BP07438 61 aa6.04□□□□□ -1.44
CALD1-207ENST00000430085 SSPOA2VEC9 5147 aa6□□□□□ -1.45
CALD1-207ENST00000430085 TNP1P09430 55 aa5.97□□□□□ -1.45
CALD1-207ENST00000430085 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
CALD1-207ENST00000430085 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
CALD1-207ENST00000430085 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
CALD1-207ENST00000430085 MT1XP80297 61 aa5.88□□□□□ -1.47
CALD1-207ENST00000430085 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
CALD1-207ENST00000430085 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
CALD1-207ENST00000430085 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
CALD1-207ENST00000430085 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
CALD1-207ENST00000430085 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
CALD1-207ENST00000430085 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
CALD1-207ENST00000430085 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
CALD1-207ENST00000430085 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
CALD1-207ENST00000430085 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
CALD1-207ENST00000430085 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
CALD1-207ENST00000430085 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
CALD1-207ENST00000430085 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
CALD1-207ENST00000430085 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
CALD1-207ENST00000430085 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
CALD1-207ENST00000430085 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
CALD1-207ENST00000430085 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
CALD1-207ENST00000430085 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
CALD1-207ENST00000430085 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
CALD1-207ENST00000430085 KMT2DO14686 5537 aa5.38□□□□□ -1.55
CALD1-207ENST00000430085 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
CALD1-207ENST00000430085 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
CALD1-207ENST00000430085 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
CALD1-207ENST00000430085 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
CALD1-207ENST00000430085 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
CALD1-207ENST00000430085 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms