RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
UPK3BP1-201ENST00000428678 UBL5Q9BZL1 73 aa7.71□□□□□ -1.18
UPK3BP1-201ENST00000428678 MT1XP80297 61 aa7.69□□□□□ -1.18
UPK3BP1-201ENST00000428678 A0A1W2PPM0 123 aa7.67□□□□□ -1.18
UPK3BP1-201ENST00000428678 C9orf118A6NHY6 69 aa7.67□□□□□ -1.18
UPK3BP1-201ENST00000428678 SPRR2DP22532 72 aa7.66□□□□□ -1.18
UPK3BP1-201ENST00000428678 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
UPK3BP1-201ENST00000428678 A8MUN3 132 aa7.64□□□□□ -1.19
UPK3BP1-201ENST00000428678 H0YAA0 97 aa7.63□□□□□ -1.19
UPK3BP1-201ENST00000428678 SMIM6P0DI80 62 aa7.63□□□□□ -1.19
UPK3BP1-201ENST00000428678 NDUFC1O43677 76 aa7.61□□□□□ -1.19
UPK3BP1-201ENST00000428678 TAX1BP3O14907 124 aa7.6□□□□□ -1.19
UPK3BP1-201ENST00000428678 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
UPK3BP1-201ENST00000428678 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
UPK3BP1-201ENST00000428678 ADM2Q7Z4H4 148 aa7.58□□□□□ -1.2
UPK3BP1-201ENST00000428678 K7EP34 96 aa7.57□□□□□ -1.2
UPK3BP1-201ENST00000428678 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
UPK3BP1-201ENST00000428678 LOC101927531A0A1B0GV80 90 aa7.53□□□□□ -1.2
UPK3BP1-201ENST00000428678 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
UPK3BP1-201ENST00000428678 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
UPK3BP1-201ENST00000428678 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
UPK3BP1-201ENST00000428678 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
UPK3BP1-201ENST00000428678 ACYP1P07311 99 aa7.43□□□□□ -1.22
UPK3BP1-201ENST00000428678 R4GN34 69 aa7.43□□□□□ -1.22
UPK3BP1-201ENST00000428678 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
UPK3BP1-201ENST00000428678 GPR98Q8WXG9 6306 aa7.42□□□□□ -1.22
UPK3BP1-201ENST00000428678 PCP4L1A6NKN8 68 aa7.36□□□□□ -1.23
UPK3BP1-201ENST00000428678 H0Y9P7 68 aa7.35□□□□□ -1.23
UPK3BP1-201ENST00000428678 M0QZ58 72 aa7.35□□□□□ -1.23
UPK3BP1-201ENST00000428678 P0C880 135 aa7.34□□□□□ -1.23
UPK3BP1-201ENST00000428678 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
UPK3BP1-201ENST00000428678 ATOX1O00244 68 aa7.33□□□□□ -1.24
UPK3BP1-201ENST00000428678 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
UPK3BP1-201ENST00000428678 UQCRQO14949 82 aa7.31□□□□□ -1.24
UPK3BP1-201ENST00000428678 LINC01554Q52M75 96 aa7.31□□□□□ -1.24
UPK3BP1-201ENST00000428678 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
UPK3BP1-201ENST00000428678 DSTQ03001 7570 aaKnown RBP7.22□□□□□ -1.25
UPK3BP1-201ENST00000428678 ETDBQ3ZM63 59 aa7.2□□□□□ -1.26
UPK3BP1-201ENST00000428678 COL5A1-AS1Q5SY13 56 aa7.2□□□□□ -1.26
UPK3BP1-201ENST00000428678 HIST1H4AP62805 103 aaKnown RBP7.19□□□□□ -1.26
UPK3BP1-201ENST00000428678 LINC00208Q96KT6 92 aa7.19□□□□□ -1.26
UPK3BP1-201ENST00000428678 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
UPK3BP1-201ENST00000428678 F8W1H4 67 aa7.13□□□□□ -1.27
UPK3BP1-201ENST00000428678 GTF2H5Q6ZYL4 71 aa7.13□□□□□ -1.27
UPK3BP1-201ENST00000428678 ATP5EP2Q5VTU8 51 aa7.12□□□□□ -1.27
UPK3BP1-201ENST00000428678 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
UPK3BP1-201ENST00000428678 MP68P56378 58 aa7.06□□□□□ -1.28
UPK3BP1-201ENST00000428678 MT-ATP8P03928 68 aa7.05□□□□□ -1.28
UPK3BP1-201ENST00000428678 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
UPK3BP1-201ENST00000428678 A0A1B0GV90 55 aa6.98□□□□□ -1.29
UPK3BP1-201ENST00000428678 FAM240AA0A1B0GVK7 77 aa6.97□□□□□ -1.29
UPK3BP1-201ENST00000428678 OCR1Q9BZK8 76 aa6.97□□□□□ -1.29
UPK3BP1-201ENST00000428678 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
UPK3BP1-201ENST00000428678 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
UPK3BP1-201ENST00000428678 H3BPC8 53 aa6.87□□□□□ -1.31
UPK3BP1-201ENST00000428678 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
UPK3BP1-201ENST00000428678 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
UPK3BP1-201ENST00000428678 LINC00643Q86TS7 51 aa6.87□□□□□ -1.31
UPK3BP1-201ENST00000428678 MT1EP04732 61 aa6.85□□□□□ -1.31
UPK3BP1-201ENST00000428678 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
UPK3BP1-201ENST00000428678 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.32
UPK3BP1-201ENST00000428678 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
UPK3BP1-201ENST00000428678 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
UPK3BP1-201ENST00000428678 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
UPK3BP1-201ENST00000428678 ACYP2P14621 99 aa6.76□□□□□ -1.33
UPK3BP1-201ENST00000428678 AHNAK2Q8IVF2 5795 aa6.76□□□□□ -1.33
UPK3BP1-201ENST00000428678 MT4P47944 62 aa6.75□□□□□ -1.33
UPK3BP1-201ENST00000428678 LCE4AQ5TA78 99 aa6.71□□□□□ -1.34
UPK3BP1-201ENST00000428678 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
UPK3BP1-201ENST00000428678 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
UPK3BP1-201ENST00000428678 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
UPK3BP1-201ENST00000428678 MT1GP13640 62 aa6.65□□□□□ -1.34
UPK3BP1-201ENST00000428678 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
UPK3BP1-201ENST00000428678 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
UPK3BP1-201ENST00000428678 KRTAP5-10Q6L8G5 202 aa6.59□□□□□ -1.35
UPK3BP1-201ENST00000428678 A0A0D9SG42 100 aa6.58□□□□□ -1.36
UPK3BP1-201ENST00000428678 J3QR89 54 aa6.58□□□□□ -1.36
UPK3BP1-201ENST00000428678 MT1MQ8N339 61 aa6.56□□□□□ -1.36
UPK3BP1-201ENST00000428678 K7ERU9 68 aa6.54□□□□□ -1.36
UPK3BP1-201ENST00000428678 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
UPK3BP1-201ENST00000428678 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
UPK3BP1-201ENST00000428678 MT1LQ93083 61 aa6.47□□□□□ -1.37
UPK3BP1-201ENST00000428678 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
UPK3BP1-201ENST00000428678 KRTAP5-7Q6L8G8 165 aa6.4□□□□□ -1.38
UPK3BP1-201ENST00000428678 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
UPK3BP1-201ENST00000428678 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
UPK3BP1-201ENST00000428678 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
UPK3BP1-201ENST00000428678 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
UPK3BP1-201ENST00000428678 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
UPK3BP1-201ENST00000428678 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
UPK3BP1-201ENST00000428678 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
UPK3BP1-201ENST00000428678 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
UPK3BP1-201ENST00000428678 SEC61GP60059 68 aa6.25□□□□□ -1.41
UPK3BP1-201ENST00000428678 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
UPK3BP1-201ENST00000428678 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
UPK3BP1-201ENST00000428678 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
UPK3BP1-201ENST00000428678 A0A1B0GU33 70 aa6.18□□□□□ -1.42
UPK3BP1-201ENST00000428678 KRTAP20-2Q3LI61 65 aa6.18□□□□□ -1.42
UPK3BP1-201ENST00000428678 COA5Q86WW8 74 aa6.16□□□□□ -1.42
UPK3BP1-201ENST00000428678 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms