RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 LINC00308Q8TCZ7 52 aa1.54□□□□□ -2.16
CCDC30-203ENST00000428554 USMG5Q96IX5 58 aa1.53□□□□□ -2.16
CCDC30-203ENST00000428554 USH2AO75445 5202 aa1.53□□□□□ -2.16
CCDC30-203ENST00000428554 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
CCDC30-203ENST00000428554 MRPL34Q9BQ48 92 aaKnown RBP1.53□□□□□ -2.16
CCDC30-203ENST00000428554 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
CCDC30-203ENST00000428554 DNAH10Q8IVF4 4471 aa1.53□□□□□ -2.17
CCDC30-203ENST00000428554 TP53AIP1Q9HCN2 124 aa1.53□□□□□ -2.17
CCDC30-203ENST00000428554 Q9Y3F1 56 aa1.53□□□□□ -2.17
CCDC30-203ENST00000428554 DNAH7Q8WXX0 4024 aa1.52□□□□□ -2.17
CCDC30-203ENST00000428554 NDUFA1O15239 70 aa1.52□□□□□ -2.17
CCDC30-203ENST00000428554 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
CCDC30-203ENST00000428554 LRP1BQ9NZR2 4599 aa1.52□□□□□ -2.17
CCDC30-203ENST00000428554 FAT1Q14517 4588 aa1.51□□□□□ -2.17
CCDC30-203ENST00000428554 CCL22O00626 93 aa1.51□□□□□ -2.17
CCDC30-203ENST00000428554 H0YAA0 97 aa1.5□□□□□ -2.17
CCDC30-203ENST00000428554 DNAH11Q96DT5 4516 aa1.49□□□□□ -2.17
CCDC30-203ENST00000428554 PKHD1L1Q86WI1 4243 aa1.49□□□□□ -2.17
CCDC30-203ENST00000428554 DEFB119Q8N690 84 aa1.48□□□□□ -2.17
CCDC30-203ENST00000428554 COX6A2Q02221 97 aa1.48□□□□□ -2.17
CCDC30-203ENST00000428554 KRTAP2-1Q9BYU5 128 aa1.48□□□□□ -2.17
CCDC30-203ENST00000428554 KRTAP13-3Q3SY46 172 aa1.48□□□□□ -2.17
CCDC30-203ENST00000428554 BRD3OSQ6XYD6 125 aa1.48□□□□□ -2.17
CCDC30-203ENST00000428554 TFF3Q07654 80 aa1.47□□□□□ -2.17
CCDC30-203ENST00000428554 PIGYQ3MUY2 71 aa1.47□□□□□ -2.17
CCDC30-203ENST00000428554 MUC12Q9UKN1 5478 aa1.47□□□□□ -2.17
CCDC30-203ENST00000428554 DEFB109BQ30KR1 87 aa1.46□□□□□ -2.18
CCDC30-203ENST00000428554 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
CCDC30-203ENST00000428554 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
CCDC30-203ENST00000428554 KRTAP10-10P60014 251 aa1.45□□□□□ -2.18
CCDC30-203ENST00000428554 APOBP04114 4563 aaKnown RBP1.45□□□□□ -2.18
CCDC30-203ENST00000428554 LRP1Q07954 4544 aaKnown RBP1.44□□□□□ -2.18
CCDC30-203ENST00000428554 Q6ZSA8 131 aa1.44□□□□□ -2.18
CCDC30-203ENST00000428554 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
CCDC30-203ENST00000428554 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
CCDC30-203ENST00000428554 Q5VSD8 79 aa1.43□□□□□ -2.18
CCDC30-203ENST00000428554 MINOS1Q5TGZ0 78 aa1.43□□□□□ -2.18
CCDC30-203ENST00000428554 C6orf48Q9UBA6 75 aa1.43□□□□□ -2.18
CCDC30-203ENST00000428554 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
CCDC30-203ENST00000428554 RPS27P42677 84 aaKnown RBP1.41□□□□□ -2.18
CCDC30-203ENST00000428554 RPS27LQ71UM5 84 aaKnown RBP1.41□□□□□ -2.18
CCDC30-203ENST00000428554 DNAH6Q9C0G6 4158 aa1.41□□□□□ -2.18
CCDC30-203ENST00000428554 PKD1P98161 4303 aa1.41□□□□□ -2.18
CCDC30-203ENST00000428554 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
CCDC30-203ENST00000428554 VPS13DQ5THJ4 4388 aa1.4□□□□□ -2.19
CCDC30-203ENST00000428554 IGLV5-48A0A075B6I7 105 aa1.4□□□□□ -2.19
CCDC30-203ENST00000428554 KRTAP5-8O75690 187 aa1.4□□□□□ -2.19
CCDC30-203ENST00000428554 IAPPP10997 89 aa1.4□□□□□ -2.19
CCDC30-203ENST00000428554 LCE3AQ5TA76 89 aa1.4□□□□□ -2.19
CCDC30-203ENST00000428554 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
CCDC30-203ENST00000428554 KRTAP13-1Q8IUC0 172 aa1.39□□□□□ -2.19
CCDC30-203ENST00000428554 DNAH3Q8TD57 4116 aa1.39□□□□□ -2.19
CCDC30-203ENST00000428554 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
CCDC30-203ENST00000428554 SPRR1AP35321 89 aa1.38□□□□□ -2.19
CCDC30-203ENST00000428554 HRNRQ86YZ3 2850 aaPredicted RBP1.38□□□□□ -2.19
CCDC30-203ENST00000428554 ARHGAP5-AS1Q96IT6 56 aa1.38□□□□□ -2.19
CCDC30-203ENST00000428554 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
CCDC30-203ENST00000428554 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 SPINK9Q5DT21 86 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 CD52P31358 61 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 DNAH5Q8TE73 4624 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 DEFB130BP0DP73 79 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 DEFB130AP0DP74 79 aa1.36□□□□□ -2.19
CCDC30-203ENST00000428554 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
CCDC30-203ENST00000428554 WFDC13Q8IUB5 93 aa1.34□□□□□ -2.19
CCDC30-203ENST00000428554 LINC01590Q5TEZ4 76 aa1.34□□□□□ -2.2
CCDC30-203ENST00000428554 DNAH2Q9P225 4427 aa1.34□□□□□ -2.2
CCDC30-203ENST00000428554 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
CCDC30-203ENST00000428554 WT1-ASQ06250 92 aa1.33□□□□□ -2.2
CCDC30-203ENST00000428554 DEFB131AP59861 70 aa1.32□□□□□ -2.2
CCDC30-203ENST00000428554 DEFB105AQ8NG35 78 aa1.32□□□□□ -2.2
CCDC30-203ENST00000428554 DNAH17Q9UFH2 4485 aa1.31□□□□□ -2.2
CCDC30-203ENST00000428554 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
CCDC30-203ENST00000428554 U3KQA8 63 aa1.31□□□□□ -2.2
CCDC30-203ENST00000428554 SPRR1BP22528 89 aa1.31□□□□□ -2.2
CCDC30-203ENST00000428554 STATHP02808 62 aa1.3□□□□□ -2.2
CCDC30-203ENST00000428554 SORL1Q92673 2214 aa1.3□□□□□ -2.2
CCDC30-203ENST00000428554 A0A0D9SG42 100 aa1.3□□□□□ -2.2
CCDC30-203ENST00000428554 RPL39P62891 51 aaKnown RBP1.3□□□□□ -2.2
CCDC30-203ENST00000428554 WFDC10BQ8IUB3 73 aa1.29□□□□□ -2.2
CCDC30-203ENST00000428554 APLNQ9ULZ1 77 aa1.29□□□□□ -2.2
CCDC30-203ENST00000428554 H3BUA1 57 aa1.28□□□□□ -2.2
CCDC30-203ENST00000428554 KRTAP5-5Q701N2 237 aaPredicted RBP1.28□□□□□ -2.2
CCDC30-203ENST00000428554 RPL39LQ96EH5 51 aaKnown RBP1.28□□□□□ -2.2
CCDC30-203ENST00000428554 TNXBP22105 4242 aa1.27□□□□□ -2.21
CCDC30-203ENST00000428554 KAAG1Q9UBP8 84 aa1.24□□□□□ -2.21
CCDC30-203ENST00000428554 S4R3F8 94 aa1.24□□□□□ -2.21
CCDC30-203ENST00000428554 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
CCDC30-203ENST00000428554 TTTY10Q9BZA0 68 aa1.24□□□□□ -2.21
CCDC30-203ENST00000428554 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
CCDC30-203ENST00000428554 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
CCDC30-203ENST00000428554 PRCDQ00LT1 54 aa1.22□□□□□ -2.21
CCDC30-203ENST00000428554 M0QY20 66 aa1.21□□□□□ -2.21
CCDC30-203ENST00000428554 LPAP08519 4548 aa1.21□□□□□ -2.22
CCDC30-203ENST00000428554 CLPSL2Q6UWE3 100 aa1.21□□□□□ -2.22
CCDC30-203ENST00000428554 DEFB104AQ8WTQ1 72 aa1.2□□□□□ -2.22
CCDC30-203ENST00000428554 KLK9Q2XQG4 91 aa1.19□□□□□ -2.22
CCDC30-203ENST00000428554 SMR3BP02814 79 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 259.8 ms