RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
SMC1A-203ENST00000428014 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
SMC1A-203ENST00000428014 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
SMC1A-203ENST00000428014 MT2AP02795 61 aa4.44□□□□□ -1.7
SMC1A-203ENST00000428014 SCGB1A1P11684 91 aa4.43□□□□□ -1.7
SMC1A-203ENST00000428014 SMIM20Q8N5G0 67 aa4.42□□□□□ -1.7
SMC1A-203ENST00000428014 ATOX1O00244 68 aa4.41□□□□□ -1.7
SMC1A-203ENST00000428014 UQCRQO14949 82 aa4.41□□□□□ -1.7
SMC1A-203ENST00000428014 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
SMC1A-203ENST00000428014 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
SMC1A-203ENST00000428014 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
SMC1A-203ENST00000428014 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
SMC1A-203ENST00000428014 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
SMC1A-203ENST00000428014 MT1FP04733 61 aa4.38□□□□□ -1.71
SMC1A-203ENST00000428014 TRAV7A0A075B6U4 112 aa4.37□□□□□ -1.71
SMC1A-203ENST00000428014 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
SMC1A-203ENST00000428014 C5orf47Q569G3 176 aa4.36□□□□□ -1.71
SMC1A-203ENST00000428014 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
SMC1A-203ENST00000428014 H0Y9P7 68 aa4.35□□□□□ -1.71
SMC1A-203ENST00000428014 H3BPC8 53 aa4.35□□□□□ -1.71
SMC1A-203ENST00000428014 MP68P56378 58 aa4.35□□□□□ -1.71
SMC1A-203ENST00000428014 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
SMC1A-203ENST00000428014 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
SMC1A-203ENST00000428014 CYP4F30PQ9H0H9 118 aa4.32□□□□□ -1.72
SMC1A-203ENST00000428014 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
SMC1A-203ENST00000428014 LINC00208Q96KT6 92 aa4.3□□□□□ -1.72
SMC1A-203ENST00000428014 COX7CP15954 63 aa4.29□□□□□ -1.72
SMC1A-203ENST00000428014 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
SMC1A-203ENST00000428014 USH2AO75445 5202 aa4.28□□□□□ -1.72
SMC1A-203ENST00000428014 A8MUN3 132 aa4.28□□□□□ -1.72
SMC1A-203ENST00000428014 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
SMC1A-203ENST00000428014 S4R3F8 94 aa4.27□□□□□ -1.73
SMC1A-203ENST00000428014 C20orf197Q8N268 126 aa4.25□□□□□ -1.73
SMC1A-203ENST00000428014 KLKP1Q107X0 134 aa4.24□□□□□ -1.73
SMC1A-203ENST00000428014 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
SMC1A-203ENST00000428014 H0YAA0 97 aa4.23□□□□□ -1.73
SMC1A-203ENST00000428014 LCA10Q71F78 164 aa4.22□□□□□ -1.73
SMC1A-203ENST00000428014 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
SMC1A-203ENST00000428014 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
SMC1A-203ENST00000428014 NDUFC1O43677 76 aa4.21□□□□□ -1.74
SMC1A-203ENST00000428014 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
SMC1A-203ENST00000428014 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
SMC1A-203ENST00000428014 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
SMC1A-203ENST00000428014 CCDC179H3BU77 68 aa4.17□□□□□ -1.74
SMC1A-203ENST00000428014 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
SMC1A-203ENST00000428014 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
SMC1A-203ENST00000428014 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
SMC1A-203ENST00000428014 H7BZZ5 65 aa4.14□□□□□ -1.75
SMC1A-203ENST00000428014 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
SMC1A-203ENST00000428014 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
SMC1A-203ENST00000428014 CYSTM1Q9H1C7 97 aa4.12□□□□□ -1.75
SMC1A-203ENST00000428014 ACYP2P14621 99 aa4.1□□□□□ -1.75
SMC1A-203ENST00000428014 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
SMC1A-203ENST00000428014 Q5VV11 94 aa4.1□□□□□ -1.75
SMC1A-203ENST00000428014 TMEM258P61165 79 aa4.08□□□□□ -1.76
SMC1A-203ENST00000428014 MT1BP07438 61 aa4.07□□□□□ -1.76
SMC1A-203ENST00000428014 CHKB-CPT1BH3BT56 60 aa4.02□□□□□ -1.77
SMC1A-203ENST00000428014 SPTSSBQ8NFR3 76 aa4.02□□□□□ -1.77
SMC1A-203ENST00000428014 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
SMC1A-203ENST00000428014 COA5Q86WW8 74 aa4.01□□□□□ -1.77
SMC1A-203ENST00000428014 A6NN06 94 aa4□□□□□ -1.77
SMC1A-203ENST00000428014 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
SMC1A-203ENST00000428014 ADM2Q7Z4H4 148 aa3.99□□□□□ -1.77
SMC1A-203ENST00000428014 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
SMC1A-203ENST00000428014 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
SMC1A-203ENST00000428014 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
SMC1A-203ENST00000428014 R4GN34 69 aa3.94□□□□□ -1.78
SMC1A-203ENST00000428014 P0C880 135 aa3.9□□□□□ -1.79
SMC1A-203ENST00000428014 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
SMC1A-203ENST00000428014 M0QZ58 72 aa3.88□□□□□ -1.79
SMC1A-203ENST00000428014 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
SMC1A-203ENST00000428014 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
SMC1A-203ENST00000428014 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
SMC1A-203ENST00000428014 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SMC1A-203ENST00000428014 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
SMC1A-203ENST00000428014 SEC61GP60059 68 aa3.85□□□□□ -1.79
SMC1A-203ENST00000428014 MT1XP80297 61 aa3.83□□□□□ -1.8
SMC1A-203ENST00000428014 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
SMC1A-203ENST00000428014 V9GYY9 64 aa3.82□□□□□ -1.8
SMC1A-203ENST00000428014 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
SMC1A-203ENST00000428014 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
SMC1A-203ENST00000428014 A0A1B0GU69 56 aa3.8□□□□□ -1.8
SMC1A-203ENST00000428014 MT3P25713 68 aa3.8□□□□□ -1.8
SMC1A-203ENST00000428014 Q1T7F1 81 aa3.78□□□□□ -1.8
SMC1A-203ENST00000428014 A0A1B0GU33 70 aa3.73□□□□□ -1.81
SMC1A-203ENST00000428014 KMT2DO14686 5537 aa3.72□□□□□ -1.81
SMC1A-203ENST00000428014 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
SMC1A-203ENST00000428014 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
SMC1A-203ENST00000428014 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
SMC1A-203ENST00000428014 NEBP20929 6669 aa3.69□□□□□ -1.82
SMC1A-203ENST00000428014 UQCR11O14957 56 aa3.68□□□□□ -1.82
SMC1A-203ENST00000428014 PSPHP1O15172 72 aa3.68□□□□□ -1.82
SMC1A-203ENST00000428014 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
SMC1A-203ENST00000428014 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
SMC1A-203ENST00000428014 KRTAP13-4Q3LI77 160 aa3.66□□□□□ -1.82
SMC1A-203ENST00000428014 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
SMC1A-203ENST00000428014 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SMC1A-203ENST00000428014 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
SMC1A-203ENST00000428014 A6NED7 52 aa3.6□□□□□ -1.83
SMC1A-203ENST00000428014 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms