RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 KLKP1Q107X0 134 aa8.23□□□□□ -1.09
PSPC1-202ENST00000427943 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
PSPC1-202ENST00000427943 KRTAP6-3Q3LI67 103 aa8.23□□□□□ -1.09
PSPC1-202ENST00000427943 HIST1H4AP62805 103 aaKnown RBP8.22□□□□□ -1.09
PSPC1-202ENST00000427943 A6NN06 94 aa8.21□□□□□ -1.1
PSPC1-202ENST00000427943 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
PSPC1-202ENST00000427943 FAM240AA0A1B0GVK7 77 aa8.2□□□□□ -1.1
PSPC1-202ENST00000427943 H0Y9P7 68 aa8.17□□□□□ -1.1
PSPC1-202ENST00000427943 UQCRQO14949 82 aa8.16□□□□□ -1.1
PSPC1-202ENST00000427943 ATOX1O00244 68 aa8.12□□□□□ -1.11
PSPC1-202ENST00000427943 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
PSPC1-202ENST00000427943 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
PSPC1-202ENST00000427943 NDUFC1O43677 76 aa8.06□□□□□ -1.12
PSPC1-202ENST00000427943 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
PSPC1-202ENST00000427943 LINC00643Q86TS7 51 aa8.05□□□□□ -1.12
PSPC1-202ENST00000427943 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
PSPC1-202ENST00000427943 H0YAA0 97 aa8□□□□□ -1.13
PSPC1-202ENST00000427943 A8MUN3 132 aa7.99□□□□□ -1.13
PSPC1-202ENST00000427943 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
PSPC1-202ENST00000427943 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.14
PSPC1-202ENST00000427943 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
PSPC1-202ENST00000427943 MP68P56378 58 aa7.94□□□□□ -1.14
PSPC1-202ENST00000427943 NEBP20929 6669 aa7.93□□□□□ -1.14
PSPC1-202ENST00000427943 MUC12Q9UKN1 5478 aa7.86□□□□□ -1.15
PSPC1-202ENST00000427943 ANAPC13Q9BS18 74 aa7.85□□□□□ -1.15
PSPC1-202ENST00000427943 KRTAP5-9P26371 169 aa7.83□□□□□ -1.16
PSPC1-202ENST00000427943 H3BPC8 53 aa7.79□□□□□ -1.16
PSPC1-202ENST00000427943 P0C880 135 aa7.78□□□□□ -1.16
PSPC1-202ENST00000427943 DMAC1Q96GE9 116 aa7.77□□□□□ -1.17
PSPC1-202ENST00000427943 R4GN34 69 aa7.75□□□□□ -1.17
PSPC1-202ENST00000427943 MT1XP80297 61 aa7.74□□□□□ -1.17
PSPC1-202ENST00000427943 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
PSPC1-202ENST00000427943 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
PSPC1-202ENST00000427943 KMT2DO14686 5537 aa7.72□□□□□ -1.17
PSPC1-202ENST00000427943 M0QZ58 72 aa7.71□□□□□ -1.18
PSPC1-202ENST00000427943 C20orf197Q8N268 126 aa7.71□□□□□ -1.18
PSPC1-202ENST00000427943 KRTAP20-1Q3LI63 56 aa7.69□□□□□ -1.18
PSPC1-202ENST00000427943 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
PSPC1-202ENST00000427943 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
PSPC1-202ENST00000427943 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
PSPC1-202ENST00000427943 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
PSPC1-202ENST00000427943 COX7CP15954 63 aa7.61□□□□□ -1.19
PSPC1-202ENST00000427943 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
PSPC1-202ENST00000427943 TRAV7A0A075B6U4 112 aa7.58□□□□□ -1.2
PSPC1-202ENST00000427943 ACYP2P14621 99 aa7.55□□□□□ -1.2
PSPC1-202ENST00000427943 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
PSPC1-202ENST00000427943 SERP2Q8N6R1 65 aa7.55□□□□□ -1.2
PSPC1-202ENST00000427943 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
PSPC1-202ENST00000427943 SPRR2EP22531 72 aa7.53□□□□□ -1.2
PSPC1-202ENST00000427943 SPRR2BP35325 72 aa7.53□□□□□ -1.2
PSPC1-202ENST00000427943 SPRR2AP35326 72 aa7.53□□□□□ -1.2
PSPC1-202ENST00000427943 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
PSPC1-202ENST00000427943 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
PSPC1-202ENST00000427943 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
PSPC1-202ENST00000427943 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
PSPC1-202ENST00000427943 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
PSPC1-202ENST00000427943 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
PSPC1-202ENST00000427943 TMEM258P61165 79 aa7.44□□□□□ -1.22
PSPC1-202ENST00000427943 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
PSPC1-202ENST00000427943 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
PSPC1-202ENST00000427943 SNURFQ9Y675 71 aa7.42□□□□□ -1.22
PSPC1-202ENST00000427943 KRTAP10-7P60409 375 aaPredicted RBP7.4□□□□□ -1.22
PSPC1-202ENST00000427943 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.22
PSPC1-202ENST00000427943 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
PSPC1-202ENST00000427943 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
PSPC1-202ENST00000427943 SVIPQ8NHG7 77 aa7.29□□□□□ -1.24
PSPC1-202ENST00000427943 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
PSPC1-202ENST00000427943 SPRR2DP22532 72 aa7.27□□□□□ -1.25
PSPC1-202ENST00000427943 ATP5EP56381 51 aaPredicted RBP7.26□□□□□ -1.25
PSPC1-202ENST00000427943 H7BZZ5 65 aa7.25□□□□□ -1.25
PSPC1-202ENST00000427943 KRTAP13-4Q3LI77 160 aa7.24□□□□□ -1.25
PSPC1-202ENST00000427943 SERP1Q9Y6X1 66 aa7.21□□□□□ -1.26
PSPC1-202ENST00000427943 KRTAP2-2Q9BYT5 123 aa7.2□□□□□ -1.26
PSPC1-202ENST00000427943 KRTAP2-1Q9BYU5 128 aa7.2□□□□□ -1.26
PSPC1-202ENST00000427943 COA5Q86WW8 74 aa7.13□□□□□ -1.27
PSPC1-202ENST00000427943 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
PSPC1-202ENST00000427943 SMIM26A0A096LP01 95 aa7.1□□□□□ -1.27
PSPC1-202ENST00000427943 LCE3BQ5TA77 95 aa7.07□□□□□ -1.28
PSPC1-202ENST00000427943 A0A0D9SG42 100 aa7.02□□□□□ -1.29
PSPC1-202ENST00000427943 SEC61GP60059 68 aa7□□□□□ -1.29
PSPC1-202ENST00000427943 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
PSPC1-202ENST00000427943 KRTAP19-7Q3SYF9 63 aa6.92□□□□□ -1.3
PSPC1-202ENST00000427943 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
PSPC1-202ENST00000427943 A0A1B0GU33 70 aa6.9□□□□□ -1.3
PSPC1-202ENST00000427943 MT1EP04732 61 aa6.87□□□□□ -1.31
PSPC1-202ENST00000427943 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
PSPC1-202ENST00000427943 Q1T7F1 81 aa6.85□□□□□ -1.31
PSPC1-202ENST00000427943 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
PSPC1-202ENST00000427943 V9GYY9 64 aa6.84□□□□□ -1.31
PSPC1-202ENST00000427943 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
PSPC1-202ENST00000427943 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
PSPC1-202ENST00000427943 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
PSPC1-202ENST00000427943 A0A1B0GU69 56 aa6.75□□□□□ -1.33
PSPC1-202ENST00000427943 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
PSPC1-202ENST00000427943 A8MU10 97 aa6.71□□□□□ -1.34
PSPC1-202ENST00000427943 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
PSPC1-202ENST00000427943 MT1GP13640 62 aa6.62□□□□□ -1.35
PSPC1-202ENST00000427943 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
PSPC1-202ENST00000427943 PSPHP1O15172 72 aa6.6□□□□□ -1.35
PSPC1-202ENST00000427943 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms