RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SSPOA2VEC9 5147 aa9.65□□□□□ -0.86
HSPG2-205ENST00000427897 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.65□□□□□ -0.86
HSPG2-205ENST00000427897 CSAG1Q6PB30 78 aa9.64□□□□□ -0.87
HSPG2-205ENST00000427897 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
HSPG2-205ENST00000427897 LCA10Q71F78 164 aa9.58□□□□□ -0.88
HSPG2-205ENST00000427897 KRTAP9-7A8MTY7 169 aa9.56□□□□□ -0.88
HSPG2-205ENST00000427897 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
HSPG2-205ENST00000427897 SERP2Q8N6R1 65 aa9.54□□□□□ -0.88
HSPG2-205ENST00000427897 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
HSPG2-205ENST00000427897 FCGBPQ9Y6R7 5405 aaPredicted RBP9.51□□□□□ -0.89
HSPG2-205ENST00000427897 A8MUN3 132 aa9.5□□□□□ -0.89
HSPG2-205ENST00000427897 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
HSPG2-205ENST00000427897 SNURFQ9Y675 71 aa9.4□□□□□ -0.9
HSPG2-205ENST00000427897 COX7CP15954 63 aa9.36□□□□□ -0.91
HSPG2-205ENST00000427897 DMAC1Q96GE9 116 aa9.36□□□□□ -0.91
HSPG2-205ENST00000427897 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
HSPG2-205ENST00000427897 NDUFC1O43677 76 aa9.35□□□□□ -0.91
HSPG2-205ENST00000427897 Q5VV11 94 aa9.33□□□□□ -0.92
HSPG2-205ENST00000427897 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
HSPG2-205ENST00000427897 SPRR2GQ9BYE4 73 aa9.29□□□□□ -0.92
HSPG2-205ENST00000427897 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
HSPG2-205ENST00000427897 ACYP2P14621 99 aa9.24□□□□□ -0.93
HSPG2-205ENST00000427897 CRIPTQ9P021 101 aa9.24□□□□□ -0.93
HSPG2-205ENST00000427897 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
HSPG2-205ENST00000427897 A6NN06 94 aa9.22□□□□□ -0.93
HSPG2-205ENST00000427897 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.94
HSPG2-205ENST00000427897 MT1BP07438 61 aa9.2□□□□□ -0.94
HSPG2-205ENST00000427897 H0YAA0 97 aa9.14□□□□□ -0.95
HSPG2-205ENST00000427897 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
HSPG2-205ENST00000427897 SYNE2Q8WXH0 6885 aaKnown RBP9.11□□□□□ -0.95
HSPG2-205ENST00000427897 H7BZZ5 65 aa9.1□□□□□ -0.95
HSPG2-205ENST00000427897 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
HSPG2-205ENST00000427897 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
HSPG2-205ENST00000427897 CYSTM1Q9H1C7 97 aa9.06□□□□□ -0.96
HSPG2-205ENST00000427897 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
HSPG2-205ENST00000427897 KRTAP6-3Q3LI67 103 aa9.05□□□□□ -0.96
HSPG2-205ENST00000427897 KRTAP10-5P60370 271 aa9.02□□□□□ -0.97
HSPG2-205ENST00000427897 COA5Q86WW8 74 aa8.95□□□□□ -0.98
HSPG2-205ENST00000427897 R4GN34 69 aa8.93□□□□□ -0.98
HSPG2-205ENST00000427897 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
HSPG2-205ENST00000427897 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
HSPG2-205ENST00000427897 P0C880 135 aa8.85□□□□□ -0.99
HSPG2-205ENST00000427897 M0QZ58 72 aa8.83□□□□□ -1
HSPG2-205ENST00000427897 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
HSPG2-205ENST00000427897 TMEM258P61165 79 aa8.8□□□□□ -1
HSPG2-205ENST00000427897 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
HSPG2-205ENST00000427897 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
HSPG2-205ENST00000427897 SEC61GP60059 68 aa8.68□□□□□ -1.02
HSPG2-205ENST00000427897 SERP1Q9Y6X1 66 aa8.64□□□□□ -1.03
HSPG2-205ENST00000427897 MT1XP80297 61 aa8.63□□□□□ -1.03
HSPG2-205ENST00000427897 KRTAP5-9P26371 169 aa8.59□□□□□ -1.03
HSPG2-205ENST00000427897 PCP4P48539 62 aa8.57□□□□□ -1.04
HSPG2-205ENST00000427897 A0A1B0GU69 56 aa8.5□□□□□ -1.05
HSPG2-205ENST00000427897 MUC12Q9UKN1 5478 aa8.5□□□□□ -1.05
HSPG2-205ENST00000427897 NEBP20929 6669 aa8.49□□□□□ -1.05
HSPG2-205ENST00000427897 SPRR2FQ96RM1 72 aa8.46□□□□□ -1.06
HSPG2-205ENST00000427897 KRTAP8-1Q8IUC2 63 aa8.45□□□□□ -1.06
HSPG2-205ENST00000427897 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
HSPG2-205ENST00000427897 KRTAP12-2P59991 146 aa8.44□□□□□ -1.06
HSPG2-205ENST00000427897 A0A1B0GU33 70 aa8.43□□□□□ -1.06
HSPG2-205ENST00000427897 KRTAP20-1Q3LI63 56 aa8.42□□□□□ -1.06
HSPG2-205ENST00000427897 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
HSPG2-205ENST00000427897 KRTAP13-4Q3LI77 160 aa8.39□□□□□ -1.07
HSPG2-205ENST00000427897 KMT2DO14686 5537 aa8.36□□□□□ -1.07
HSPG2-205ENST00000427897 SPRR2EP22531 72 aa8.34□□□□□ -1.07
HSPG2-205ENST00000427897 SPRR2BP35325 72 aa8.34□□□□□ -1.07
HSPG2-205ENST00000427897 SPRR2AP35326 72 aa8.34□□□□□ -1.07
HSPG2-205ENST00000427897 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
HSPG2-205ENST00000427897 MDN1Q9NU22 5596 aa8.29□□□□□ -1.08
HSPG2-205ENST00000427897 KRTAP4-8A0A0G2JLE6 195 aa8.28□□□□□ -1.08
HSPG2-205ENST00000427897 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
HSPG2-205ENST00000427897 V9GYY9 64 aa8.27□□□□□ -1.09
HSPG2-205ENST00000427897 KRTAP10-7P60409 375 aaPredicted RBP8.26□□□□□ -1.09
HSPG2-205ENST00000427897 CAMK2N1Q7Z7J9 78 aa8.25□□□□□ -1.09
HSPG2-205ENST00000427897 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
HSPG2-205ENST00000427897 A0A0D9SG42 100 aa8.23□□□□□ -1.09
HSPG2-205ENST00000427897 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
HSPG2-205ENST00000427897 KRTAP2-3P0C7H8 128 aa8.21□□□□□ -1.1
HSPG2-205ENST00000427897 KRTAP2-4Q9BYR9 128 aa8.21□□□□□ -1.1
HSPG2-205ENST00000427897 RPS28P62857 69 aaKnown RBP8.2□□□□□ -1.1
HSPG2-205ENST00000427897 Q1T7F1 81 aa8.19□□□□□ -1.1
HSPG2-205ENST00000427897 LCE1AQ5T7P2 110 aa8.15□□□□□ -1.1
HSPG2-205ENST00000427897 UQCR11O14957 56 aa8.14□□□□□ -1.11
HSPG2-205ENST00000427897 SPINT4Q6UDR6 99 aa8.1□□□□□ -1.11
HSPG2-205ENST00000427897 A8MU10 97 aa8.07□□□□□ -1.12
HSPG2-205ENST00000427897 PSPHP1O15172 72 aa8.07□□□□□ -1.12
HSPG2-205ENST00000427897 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
HSPG2-205ENST00000427897 SPRR2DP22532 72 aa8.06□□□□□ -1.12
HSPG2-205ENST00000427897 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
HSPG2-205ENST00000427897 KRTAP2-2Q9BYT5 123 aa7.95□□□□□ -1.14
HSPG2-205ENST00000427897 KRTAP2-1Q9BYU5 128 aa7.95□□□□□ -1.14
HSPG2-205ENST00000427897 A6NED7 52 aa7.87□□□□□ -1.15
HSPG2-205ENST00000427897 LCE3BQ5TA77 95 aa7.83□□□□□ -1.16
HSPG2-205ENST00000427897 K7ERS5 55 aa7.81□□□□□ -1.16
HSPG2-205ENST00000427897 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
HSPG2-205ENST00000427897 MT1EP04732 61 aa7.66□□□□□ -1.18
HSPG2-205ENST00000427897 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
HSPG2-205ENST00000427897 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
HSPG2-205ENST00000427897 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
HSPG2-205ENST00000427897 TNP1P09430 55 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms