RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 LINC00208Q96KT6 92 aa6.78□□□□□ -1.32
RTN4-210ENST00000427710 KLKP1Q107X0 134 aa6.77□□□□□ -1.33
RTN4-210ENST00000427710 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
RTN4-210ENST00000427710 J3QR89 54 aa6.76□□□□□ -1.33
RTN4-210ENST00000427710 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
RTN4-210ENST00000427710 MP68P56378 58 aa6.71□□□□□ -1.34
RTN4-210ENST00000427710 MT1BP07438 61 aa6.66□□□□□ -1.34
RTN4-210ENST00000427710 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
RTN4-210ENST00000427710 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
RTN4-210ENST00000427710 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
RTN4-210ENST00000427710 NDUFC1O43677 76 aa6.65□□□□□ -1.34
RTN4-210ENST00000427710 A8MUN3 132 aa6.63□□□□□ -1.35
RTN4-210ENST00000427710 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
RTN4-210ENST00000427710 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
RTN4-210ENST00000427710 Q5VV11 94 aa6.62□□□□□ -1.35
RTN4-210ENST00000427710 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
RTN4-210ENST00000427710 H3BPC8 53 aa6.59□□□□□ -1.35
RTN4-210ENST00000427710 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
RTN4-210ENST00000427710 SYNE2Q8WXH0 6885 aaKnown RBP6.57□□□□□ -1.36
RTN4-210ENST00000427710 K7ERU9 68 aa6.55□□□□□ -1.36
RTN4-210ENST00000427710 A6NN06 94 aa6.53□□□□□ -1.36
RTN4-210ENST00000427710 H0YAA0 97 aa6.53□□□□□ -1.36
RTN4-210ENST00000427710 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
RTN4-210ENST00000427710 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
RTN4-210ENST00000427710 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
RTN4-210ENST00000427710 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
RTN4-210ENST00000427710 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
RTN4-210ENST00000427710 P0C880 135 aa6.44□□□□□ -1.38
RTN4-210ENST00000427710 SMIM20Q8N5G0 67 aa6.43□□□□□ -1.38
RTN4-210ENST00000427710 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.38
RTN4-210ENST00000427710 SNURFQ9Y675 71 aa6.4□□□□□ -1.38
RTN4-210ENST00000427710 ACYP2P14621 99 aa6.37□□□□□ -1.39
RTN4-210ENST00000427710 R4GN34 69 aa6.34□□□□□ -1.39
RTN4-210ENST00000427710 M0QZ58 72 aa6.33□□□□□ -1.4
RTN4-210ENST00000427710 C20orf197Q8N268 126 aa6.32□□□□□ -1.4
RTN4-210ENST00000427710 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
RTN4-210ENST00000427710 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
RTN4-210ENST00000427710 CHKB-CPT1BH3BT56 60 aa6.27□□□□□ -1.41
RTN4-210ENST00000427710 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
RTN4-210ENST00000427710 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
RTN4-210ENST00000427710 MT1XP80297 61 aa6.26□□□□□ -1.41
RTN4-210ENST00000427710 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
RTN4-210ENST00000427710 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
RTN4-210ENST00000427710 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
RTN4-210ENST00000427710 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.42
RTN4-210ENST00000427710 KMT2DO14686 5537 aa6.2□□□□□ -1.42
RTN4-210ENST00000427710 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
RTN4-210ENST00000427710 NEBP20929 6669 aa6.17□□□□□ -1.42
RTN4-210ENST00000427710 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
RTN4-210ENST00000427710 COX7CP15954 63 aa6.11□□□□□ -1.43
RTN4-210ENST00000427710 COA5Q86WW8 74 aa6.1□□□□□ -1.43
RTN4-210ENST00000427710 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
RTN4-210ENST00000427710 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
RTN4-210ENST00000427710 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
RTN4-210ENST00000427710 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
RTN4-210ENST00000427710 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
RTN4-210ENST00000427710 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
RTN4-210ENST00000427710 H7BZZ5 65 aa6.01□□□□□ -1.45
RTN4-210ENST00000427710 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
RTN4-210ENST00000427710 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
RTN4-210ENST00000427710 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
RTN4-210ENST00000427710 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
RTN4-210ENST00000427710 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
RTN4-210ENST00000427710 SPRR2EP22531 72 aa5.92□□□□□ -1.46
RTN4-210ENST00000427710 SPRR2BP35325 72 aa5.92□□□□□ -1.46
RTN4-210ENST00000427710 SPRR2AP35326 72 aa5.92□□□□□ -1.46
RTN4-210ENST00000427710 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
RTN4-210ENST00000427710 SEC61GP60059 68 aa5.91□□□□□ -1.46
RTN4-210ENST00000427710 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
RTN4-210ENST00000427710 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
RTN4-210ENST00000427710 A0A0D9SG42 100 aa5.89□□□□□ -1.47
RTN4-210ENST00000427710 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
RTN4-210ENST00000427710 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
RTN4-210ENST00000427710 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
RTN4-210ENST00000427710 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
RTN4-210ENST00000427710 A0A1B0GU33 70 aa5.83□□□□□ -1.48
RTN4-210ENST00000427710 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
RTN4-210ENST00000427710 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
RTN4-210ENST00000427710 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
RTN4-210ENST00000427710 A0A1B0GU69 56 aa5.76□□□□□ -1.49
RTN4-210ENST00000427710 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
RTN4-210ENST00000427710 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
RTN4-210ENST00000427710 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
RTN4-210ENST00000427710 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
RTN4-210ENST00000427710 SPRR2DP22532 72 aa5.7□□□□□ -1.5
RTN4-210ENST00000427710 A8MU10 97 aa5.69□□□□□ -1.5
RTN4-210ENST00000427710 ATP5EP56381 51 aaPredicted RBP5.67□□□□□ -1.5
RTN4-210ENST00000427710 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
RTN4-210ENST00000427710 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
RTN4-210ENST00000427710 H3BS24 57 aa5.6□□□□□ -1.51
RTN4-210ENST00000427710 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
RTN4-210ENST00000427710 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
RTN4-210ENST00000427710 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
RTN4-210ENST00000427710 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
RTN4-210ENST00000427710 TMEM258P61165 79 aa5.57□□□□□ -1.52
RTN4-210ENST00000427710 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
RTN4-210ENST00000427710 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
RTN4-210ENST00000427710 MT1EP04732 61 aa5.53□□□□□ -1.52
RTN4-210ENST00000427710 KRTAP4-2Q9BYR5 136 aa5.51□□□□□ -1.53
RTN4-210ENST00000427710 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms