RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 A0A087WVE0 104 aa9.14□□□□□ -0.95
UBXN4-204ENST00000426921 KRTAP5-9P26371 169 aa9.07□□□□□ -0.96
UBXN4-204ENST00000426921 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
UBXN4-204ENST00000426921 H0YAA0 97 aa9.04□□□□□ -0.96
UBXN4-204ENST00000426921 ACYP1P07311 99 aa9.02□□□□□ -0.97
UBXN4-204ENST00000426921 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
UBXN4-204ENST00000426921 UQCRQO14949 82 aa9□□□□□ -0.97
UBXN4-204ENST00000426921 FAM240AA0A1B0GVK7 77 aa8.99□□□□□ -0.97
UBXN4-204ENST00000426921 ATOX1O00244 68 aa8.99□□□□□ -0.97
UBXN4-204ENST00000426921 KMT2DO14686 5537 aa8.99□□□□□ -0.97
UBXN4-204ENST00000426921 NDUFC1O43677 76 aa8.98□□□□□ -0.97
UBXN4-204ENST00000426921 H0Y9P7 68 aa8.97□□□□□ -0.97
UBXN4-204ENST00000426921 MDN1Q9NU22 5596 aa8.95□□□□□ -0.98
UBXN4-204ENST00000426921 A8MUN3 132 aa8.93□□□□□ -0.98
UBXN4-204ENST00000426921 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
UBXN4-204ENST00000426921 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
UBXN4-204ENST00000426921 PCP4L1A6NKN8 68 aa8.9□□□□□ -0.98
UBXN4-204ENST00000426921 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
UBXN4-204ENST00000426921 LINC00643Q86TS7 51 aa8.79□□□□□ -1
UBXN4-204ENST00000426921 LINC00208Q96KT6 92 aa8.79□□□□□ -1
UBXN4-204ENST00000426921 PRO2289Q9P1D8 64 aa8.79□□□□□ -1
UBXN4-204ENST00000426921 MT1XP80297 61 aa8.78□□□□□ -1
UBXN4-204ENST00000426921 OCR1Q9BZK8 76 aa8.75□□□□□ -1.01
UBXN4-204ENST00000426921 MP68P56378 58 aa8.72□□□□□ -1.01
UBXN4-204ENST00000426921 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
UBXN4-204ENST00000426921 SPRR2FQ96RM1 72 aa8.69□□□□□ -1.02
UBXN4-204ENST00000426921 R4GN34 69 aa8.66□□□□□ -1.02
UBXN4-204ENST00000426921 P0C880 135 aa8.65□□□□□ -1.02
UBXN4-204ENST00000426921 KRTAP2-3P0C7H8 128 aa8.64□□□□□ -1.03
UBXN4-204ENST00000426921 C20orf197Q8N268 126 aa8.64□□□□□ -1.03
UBXN4-204ENST00000426921 KRTAP2-4Q9BYR9 128 aa8.64□□□□□ -1.03
UBXN4-204ENST00000426921 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
UBXN4-204ENST00000426921 H3BPC8 53 aa8.61□□□□□ -1.03
UBXN4-204ENST00000426921 SPRR2EP22531 72 aa8.61□□□□□ -1.03
UBXN4-204ENST00000426921 SPRR2BP35325 72 aa8.61□□□□□ -1.03
UBXN4-204ENST00000426921 SPRR2AP35326 72 aa8.61□□□□□ -1.03
UBXN4-204ENST00000426921 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
UBXN4-204ENST00000426921 KRTAP8-1Q8IUC2 63 aa8.59□□□□□ -1.03
UBXN4-204ENST00000426921 M0QZ58 72 aa8.57□□□□□ -1.04
UBXN4-204ENST00000426921 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
UBXN4-204ENST00000426921 LCE1AQ5T7P2 110 aa8.5□□□□□ -1.05
UBXN4-204ENST00000426921 KRTAP4-8A0A0G2JLE6 195 aa8.43□□□□□ -1.06
UBXN4-204ENST00000426921 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
UBXN4-204ENST00000426921 KRTAP4-8Q9BYQ9 185 aa8.43□□□□□ -1.06
UBXN4-204ENST00000426921 A0A1B0GV90 55 aa8.42□□□□□ -1.06
UBXN4-204ENST00000426921 TRAV7A0A075B6U4 112 aa8.41□□□□□ -1.06
UBXN4-204ENST00000426921 SCGB1A1P11684 91 aa8.4□□□□□ -1.06
UBXN4-204ENST00000426921 J3QR89 54 aa8.38□□□□□ -1.07
UBXN4-204ENST00000426921 KRTAP10-7P60409 375 aaPredicted RBP8.35□□□□□ -1.07
UBXN4-204ENST00000426921 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
UBXN4-204ENST00000426921 KRTAP2-2Q9BYT5 123 aa8.35□□□□□ -1.07
UBXN4-204ENST00000426921 KRTAP2-1Q9BYU5 128 aa8.35□□□□□ -1.07
UBXN4-204ENST00000426921 SPRR2DP22532 72 aa8.32□□□□□ -1.08
UBXN4-204ENST00000426921 ACYP2P14621 99 aa8.31□□□□□ -1.08
UBXN4-204ENST00000426921 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
UBXN4-204ENST00000426921 MT-ATP8P03928 68 aa8.23□□□□□ -1.09
UBXN4-204ENST00000426921 SMIM20Q8N5G0 67 aa8.17□□□□□ -1.1
UBXN4-204ENST00000426921 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
UBXN4-204ENST00000426921 LCE3BQ5TA77 95 aa8.12□□□□□ -1.11
UBXN4-204ENST00000426921 KRTAP13-4Q3LI77 160 aa8.01□□□□□ -1.13
UBXN4-204ENST00000426921 SPANXA2-OT1Q8N9U9 137 aa8□□□□□ -1.13
UBXN4-204ENST00000426921 SNURFQ9Y675 71 aa8□□□□□ -1.13
UBXN4-204ENST00000426921 K7ERU9 68 aa7.96□□□□□ -1.14
UBXN4-204ENST00000426921 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
UBXN4-204ENST00000426921 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
UBXN4-204ENST00000426921 LCE5AQ5TCM9 118 aa7.84□□□□□ -1.15
UBXN4-204ENST00000426921 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
UBXN4-204ENST00000426921 MT1EP04732 61 aa7.8□□□□□ -1.16
UBXN4-204ENST00000426921 DSTQ03001 7570 aaKnown RBP7.8□□□□□ -1.16
UBXN4-204ENST00000426921 KRTAP19-3Q7Z4W3 81 aa7.77□□□□□ -1.17
UBXN4-204ENST00000426921 COA5Q86WW8 74 aa7.75□□□□□ -1.17
UBXN4-204ENST00000426921 A0A0D9SG42 100 aa7.68□□□□□ -1.18
UBXN4-204ENST00000426921 SEC61GP60059 68 aa7.67□□□□□ -1.18
UBXN4-204ENST00000426921 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
UBXN4-204ENST00000426921 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
UBXN4-204ENST00000426921 GPR98Q8WXG9 6306 aa7.63□□□□□ -1.19
UBXN4-204ENST00000426921 A0A1B0GU33 70 aa7.59□□□□□ -1.19
UBXN4-204ENST00000426921 KRTAP12-1P59990 96 aa7.58□□□□□ -1.2
UBXN4-204ENST00000426921 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
UBXN4-204ENST00000426921 KRTAP4-9Q9BYQ8 210 aa7.58□□□□□ -1.2
UBXN4-204ENST00000426921 KRTAP19-5Q3LI72 72 aa7.57□□□□□ -1.2
UBXN4-204ENST00000426921 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
UBXN4-204ENST00000426921 MT1GP13640 62 aa7.55□□□□□ -1.2
UBXN4-204ENST00000426921 COX7CP15954 63 aa7.5□□□□□ -1.21
UBXN4-204ENST00000426921 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
UBXN4-204ENST00000426921 H7BZZ5 65 aa7.47□□□□□ -1.21
UBXN4-204ENST00000426921 MT1MQ8N339 61 aa7.43□□□□□ -1.22
UBXN4-204ENST00000426921 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
UBXN4-204ENST00000426921 MT1LQ93083 61 aa7.41□□□□□ -1.22
UBXN4-204ENST00000426921 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
UBXN4-204ENST00000426921 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
UBXN4-204ENST00000426921 A0A1B0GU69 56 aa7.34□□□□□ -1.23
UBXN4-204ENST00000426921 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
UBXN4-204ENST00000426921 A8MU10 97 aa7.3□□□□□ -1.24
UBXN4-204ENST00000426921 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
UBXN4-204ENST00000426921 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
UBXN4-204ENST00000426921 MT4P47944 62 aa7.27□□□□□ -1.25
UBXN4-204ENST00000426921 TNP1P09430 55 aa7.26□□□□□ -1.25
UBXN4-204ENST00000426921 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
UBXN4-204ENST00000426921 KRTAP4-3Q9BYR4 195 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 1479.4 ms