RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 UBR4Q5T4S7 5183 aa7.51□□□□□ -1.21
GINS3-203ENST00000426538 LCA10Q71F78 164 aa7.49□□□□□ -1.21
GINS3-203ENST00000426538 KRTAP19-2Q3LHN2 52 aa7.46□□□□□ -1.22
GINS3-203ENST00000426538 RNF213Q63HN8 5207 aa7.43□□□□□ -1.22
GINS3-203ENST00000426538 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
GINS3-203ENST00000426538 V9GYY9 64 aa7.41□□□□□ -1.22
GINS3-203ENST00000426538 Q1T7F1 81 aa7.38□□□□□ -1.23
GINS3-203ENST00000426538 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
GINS3-203ENST00000426538 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
GINS3-203ENST00000426538 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
GINS3-203ENST00000426538 SEC61GP60059 68 aa7.32□□□□□ -1.24
GINS3-203ENST00000426538 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
GINS3-203ENST00000426538 A0A1B0GU69 56 aa7.3□□□□□ -1.24
GINS3-203ENST00000426538 PRR15LQ9BU68 103 aa7.29□□□□□ -1.24
GINS3-203ENST00000426538 PSPHP1O15172 72 aa7.27□□□□□ -1.25
GINS3-203ENST00000426538 M0R2T5 61 aa7.24□□□□□ -1.25
GINS3-203ENST00000426538 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
GINS3-203ENST00000426538 MT1HP80294 61 aa7.22□□□□□ -1.25
GINS3-203ENST00000426538 H0YAA0 97 aa7.18□□□□□ -1.26
GINS3-203ENST00000426538 Q5VV11 94 aa7.18□□□□□ -1.26
GINS3-203ENST00000426538 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
GINS3-203ENST00000426538 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
GINS3-203ENST00000426538 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
GINS3-203ENST00000426538 A0A1B0GU33 70 aa7.1□□□□□ -1.27
GINS3-203ENST00000426538 P0C880 135 aa7.1□□□□□ -1.27
GINS3-203ENST00000426538 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
GINS3-203ENST00000426538 A6NED7 52 aa7.07□□□□□ -1.28
GINS3-203ENST00000426538 UQCR11O14957 56 aa7.07□□□□□ -1.28
GINS3-203ENST00000426538 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
GINS3-203ENST00000426538 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
GINS3-203ENST00000426538 R4GN34 69 aa6.96□□□□□ -1.29
GINS3-203ENST00000426538 M0QZ58 72 aa6.96□□□□□ -1.3
GINS3-203ENST00000426538 SPATA8Q6RVD6 105 aa6.96□□□□□ -1.3
GINS3-203ENST00000426538 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
GINS3-203ENST00000426538 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
GINS3-203ENST00000426538 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
GINS3-203ENST00000426538 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
GINS3-203ENST00000426538 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
GINS3-203ENST00000426538 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
GINS3-203ENST00000426538 MT2AP02795 61 aa6.9□□□□□ -1.3
GINS3-203ENST00000426538 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
GINS3-203ENST00000426538 MT1FP04733 61 aa6.86□□□□□ -1.31
GINS3-203ENST00000426538 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
GINS3-203ENST00000426538 A0A0D9SG42 100 aa6.83□□□□□ -1.32
GINS3-203ENST00000426538 A8MU10 97 aa6.83□□□□□ -1.32
GINS3-203ENST00000426538 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
GINS3-203ENST00000426538 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
GINS3-203ENST00000426538 K7ERS5 55 aa6.72□□□□□ -1.33
GINS3-203ENST00000426538 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
GINS3-203ENST00000426538 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
GINS3-203ENST00000426538 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
GINS3-203ENST00000426538 A6NN06 94 aa6.66□□□□□ -1.34
GINS3-203ENST00000426538 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
GINS3-203ENST00000426538 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
GINS3-203ENST00000426538 PLAC4Q8WY50 150 aa6.59□□□□□ -1.36
GINS3-203ENST00000426538 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
GINS3-203ENST00000426538 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
GINS3-203ENST00000426538 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
GINS3-203ENST00000426538 LCE2BO14633 110 aa6.51□□□□□ -1.37
GINS3-203ENST00000426538 MT1BP07438 61 aa6.47□□□□□ -1.37
GINS3-203ENST00000426538 ROMO1P60602 79 aa6.37□□□□□ -1.39
GINS3-203ENST00000426538 USH2AO75445 5202 aa6.31□□□□□ -1.4
GINS3-203ENST00000426538 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
GINS3-203ENST00000426538 KTN1-AS1Q86SY8 53 aa6.28□□□□□ -1.4
GINS3-203ENST00000426538 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
GINS3-203ENST00000426538 MT1XP80297 61 aa6.25□□□□□ -1.41
GINS3-203ENST00000426538 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
GINS3-203ENST00000426538 TNP1P09430 55 aa6.18□□□□□ -1.42
GINS3-203ENST00000426538 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
GINS3-203ENST00000426538 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
GINS3-203ENST00000426538 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
GINS3-203ENST00000426538 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
GINS3-203ENST00000426538 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
GINS3-203ENST00000426538 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
GINS3-203ENST00000426538 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
GINS3-203ENST00000426538 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
GINS3-203ENST00000426538 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
GINS3-203ENST00000426538 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
GINS3-203ENST00000426538 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
GINS3-203ENST00000426538 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
GINS3-203ENST00000426538 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
GINS3-203ENST00000426538 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
GINS3-203ENST00000426538 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
GINS3-203ENST00000426538 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
GINS3-203ENST00000426538 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
GINS3-203ENST00000426538 KMT2DO14686 5537 aa5.77□□□□□ -1.49
GINS3-203ENST00000426538 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
GINS3-203ENST00000426538 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
GINS3-203ENST00000426538 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
GINS3-203ENST00000426538 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.51
GINS3-203ENST00000426538 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
GINS3-203ENST00000426538 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
GINS3-203ENST00000426538 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
GINS3-203ENST00000426538 H3BS24 57 aa5.53□□□□□ -1.52
GINS3-203ENST00000426538 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
GINS3-203ENST00000426538 MT1EP04732 61 aa5.49□□□□□ -1.53
GINS3-203ENST00000426538 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
GINS3-203ENST00000426538 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
GINS3-203ENST00000426538 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
GINS3-203ENST00000426538 MT1LQ93083 61 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms