RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 KRTAP10-6P60371 365 aaPredicted RBP8.96□□□□□ -0.97
RARA-206ENST00000425707 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
RARA-206ENST00000425707 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
RARA-206ENST00000425707 FLG2Q5D862 2391 aaPredicted RBP8.89□□□□□ -0.99
RARA-206ENST00000425707 KIAA1109Q2LD37 5005 aa8.89□□□□□ -0.99
RARA-206ENST00000425707 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
RARA-206ENST00000425707 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
RARA-206ENST00000425707 S4R3F8 94 aa8.83□□□□□ -1
RARA-206ENST00000425707 KRTAP10-8P60410 259 aa8.81□□□□□ -1
RARA-206ENST00000425707 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
RARA-206ENST00000425707 CRIPTQ9P021 101 aa8.77□□□□□ -1.01
RARA-206ENST00000425707 TNXBP22105 4242 aa8.76□□□□□ -1.01
RARA-206ENST00000425707 XP32Q5T750 250 aa8.75□□□□□ -1.01
RARA-206ENST00000425707 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
RARA-206ENST00000425707 HSPG2P98160 4391 aa8.74□□□□□ -1.01
RARA-206ENST00000425707 RYR1P21817 5038 aa8.74□□□□□ -1.01
RARA-206ENST00000425707 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
RARA-206ENST00000425707 A0A0D9SG42 100 aa8.71□□□□□ -1.02
RARA-206ENST00000425707 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
RARA-206ENST00000425707 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
RARA-206ENST00000425707 P0C880 135 aa8.67□□□□□ -1.02
RARA-206ENST00000425707 Q5VSD8 79 aa8.65□□□□□ -1.02
RARA-206ENST00000425707 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
RARA-206ENST00000425707 MYCBP2O75592 4640 aa8.58□□□□□ -1.04
RARA-206ENST00000425707 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
RARA-206ENST00000425707 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
RARA-206ENST00000425707 M0QZ58 72 aa8.56□□□□□ -1.04
RARA-206ENST00000425707 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
RARA-206ENST00000425707 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
RARA-206ENST00000425707 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
RARA-206ENST00000425707 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
RARA-206ENST00000425707 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
RARA-206ENST00000425707 ABCA13Q86UQ4 5058 aa8.46□□□□□ -1.05
RARA-206ENST00000425707 HERC2O95714 4834 aa8.41□□□□□ -1.06
RARA-206ENST00000425707 MT1HL1P0DM35 61 aa8.41□□□□□ -1.06
RARA-206ENST00000425707 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
RARA-206ENST00000425707 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
RARA-206ENST00000425707 NDUFAF8A1L188 74 aa8.23□□□□□ -1.09
RARA-206ENST00000425707 R4GN34 69 aa8.18□□□□□ -1.1
RARA-206ENST00000425707 HERC1Q15751 4861 aa8.13□□□□□ -1.11
RARA-206ENST00000425707 LPAP08519 4548 aa8.12□□□□□ -1.11
RARA-206ENST00000425707 LRP2P98164 4655 aa8.12□□□□□ -1.11
RARA-206ENST00000425707 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
RARA-206ENST00000425707 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
RARA-206ENST00000425707 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
RARA-206ENST00000425707 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
RARA-206ENST00000425707 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
RARA-206ENST00000425707 LCE2BO14633 110 aa7.84□□□□□ -1.15
RARA-206ENST00000425707 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
RARA-206ENST00000425707 KRTAP4-1Q9BYQ7 146 aa7.82□□□□□ -1.16
RARA-206ENST00000425707 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
RARA-206ENST00000425707 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
RARA-206ENST00000425707 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
RARA-206ENST00000425707 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
RARA-206ENST00000425707 MUC2Q02817 5179 aa7.71□□□□□ -1.18
RARA-206ENST00000425707 LUZP6Q538Z0 58 aa7.68□□□□□ -1.18
RARA-206ENST00000425707 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
RARA-206ENST00000425707 RNF213Q63HN8 5207 aa7.61□□□□□ -1.19
RARA-206ENST00000425707 TNP1P09430 55 aa7.59□□□□□ -1.19
RARA-206ENST00000425707 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
RARA-206ENST00000425707 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
RARA-206ENST00000425707 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
RARA-206ENST00000425707 FAT4Q6V0I7 4981 aa7.39□□□□□ -1.23
RARA-206ENST00000425707 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
RARA-206ENST00000425707 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
RARA-206ENST00000425707 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
RARA-206ENST00000425707 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
RARA-206ENST00000425707 M0R2T5 61 aa7.03□□□□□ -1.28
RARA-206ENST00000425707 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
RARA-206ENST00000425707 MT1HP80294 61 aa6.99□□□□□ -1.29
RARA-206ENST00000425707 MT2AP02795 61 aa6.96□□□□□ -1.3
RARA-206ENST00000425707 MT1FP04733 61 aa6.94□□□□□ -1.3
RARA-206ENST00000425707 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
RARA-206ENST00000425707 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.31
RARA-206ENST00000425707 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
RARA-206ENST00000425707 INE1O15225 51 aa6.83□□□□□ -1.32
RARA-206ENST00000425707 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
RARA-206ENST00000425707 MT1XP80297 61 aa6.82□□□□□ -1.32
RARA-206ENST00000425707 MT1BP07438 61 aa6.81□□□□□ -1.32
RARA-206ENST00000425707 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
RARA-206ENST00000425707 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
RARA-206ENST00000425707 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
RARA-206ENST00000425707 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
RARA-206ENST00000425707 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
RARA-206ENST00000425707 USH2AO75445 5202 aa6.48□□□□□ -1.37
RARA-206ENST00000425707 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
RARA-206ENST00000425707 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
RARA-206ENST00000425707 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
RARA-206ENST00000425707 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
RARA-206ENST00000425707 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
RARA-206ENST00000425707 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
RARA-206ENST00000425707 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
RARA-206ENST00000425707 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
RARA-206ENST00000425707 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.44
RARA-206ENST00000425707 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
RARA-206ENST00000425707 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
RARA-206ENST00000425707 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
RARA-206ENST00000425707 MT1LQ93083 61 aa5.93□□□□□ -1.46
RARA-206ENST00000425707 KMT2DO14686 5537 aa5.92□□□□□ -1.46
RARA-206ENST00000425707 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 262.5 ms