RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 KRTAP6-3Q3LI67 103 aa9.61□□□□□ -0.87
CDCP1-202ENST00000425231 A6NN06 94 aa9.56□□□□□ -0.88
CDCP1-202ENST00000425231 H0Y9P7 68 aa9.56□□□□□ -0.88
CDCP1-202ENST00000425231 ATOX1O00244 68 aa9.55□□□□□ -0.88
CDCP1-202ENST00000425231 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
CDCP1-202ENST00000425231 CRIPTQ9P021 101 aa9.48□□□□□ -0.89
CDCP1-202ENST00000425231 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
CDCP1-202ENST00000425231 KRTAP10-5P60370 271 aa9.47□□□□□ -0.89
CDCP1-202ENST00000425231 NDUFC1O43677 76 aa9.46□□□□□ -0.9
CDCP1-202ENST00000425231 H0YAA0 97 aa9.42□□□□□ -0.9
CDCP1-202ENST00000425231 A8MUN3 132 aa9.41□□□□□ -0.9
CDCP1-202ENST00000425231 LINC00208Q96KT6 92 aa9.41□□□□□ -0.9
CDCP1-202ENST00000425231 OCR1Q9BZK8 76 aa9.39□□□□□ -0.91
CDCP1-202ENST00000425231 A0A1B0GV90 55 aa9.38□□□□□ -0.91
CDCP1-202ENST00000425231 MP68P56378 58 aa9.32□□□□□ -0.92
CDCP1-202ENST00000425231 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
CDCP1-202ENST00000425231 NEBP20929 6669 aa9.27□□□□□ -0.92
CDCP1-202ENST00000425231 MUC12Q9UKN1 5478 aa9.26□□□□□ -0.93
CDCP1-202ENST00000425231 H3BPC8 53 aa9.2□□□□□ -0.94
CDCP1-202ENST00000425231 J3QR89 54 aa9.18□□□□□ -0.94
CDCP1-202ENST00000425231 KRTAP5-9P26371 169 aa9.16□□□□□ -0.94
CDCP1-202ENST00000425231 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
CDCP1-202ENST00000425231 SCGB1A1P11684 91 aa9.12□□□□□ -0.95
CDCP1-202ENST00000425231 P0C880 135 aa9.11□□□□□ -0.95
CDCP1-202ENST00000425231 KMT2DO14686 5537 aa9.08□□□□□ -0.96
CDCP1-202ENST00000425231 MT1XP80297 61 aa9.06□□□□□ -0.96
CDCP1-202ENST00000425231 R4GN34 69 aa9.05□□□□□ -0.96
CDCP1-202ENST00000425231 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
CDCP1-202ENST00000425231 C20orf197Q8N268 126 aa9.03□□□□□ -0.96
CDCP1-202ENST00000425231 PLAC4Q8WY50 150 aa9.03□□□□□ -0.96
CDCP1-202ENST00000425231 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
CDCP1-202ENST00000425231 MDN1Q9NU22 5596 aa9.01□□□□□ -0.97
CDCP1-202ENST00000425231 M0QZ58 72 aa8.98□□□□□ -0.97
CDCP1-202ENST00000425231 TRAV7A0A075B6U4 112 aa8.94□□□□□ -0.98
CDCP1-202ENST00000425231 MT-ATP8P03928 68 aa8.91□□□□□ -0.98
CDCP1-202ENST00000425231 KRTAP20-1Q3LI63 56 aa8.9□□□□□ -0.98
CDCP1-202ENST00000425231 ACYP2P14621 99 aa8.88□□□□□ -0.99
CDCP1-202ENST00000425231 KRTAP12-2P59991 146 aa8.85□□□□□ -0.99
CDCP1-202ENST00000425231 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
CDCP1-202ENST00000425231 SMIM20Q8N5G0 67 aa8.85□□□□□ -0.99
CDCP1-202ENST00000425231 SPRR2FQ96RM1 72 aa8.84□□□□□ -0.99
CDCP1-202ENST00000425231 K7ERU9 68 aa8.8□□□□□ -1
CDCP1-202ENST00000425231 KRTAP8-1Q8IUC2 63 aa8.79□□□□□ -1
CDCP1-202ENST00000425231 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
CDCP1-202ENST00000425231 SPRR2EP22531 72 aa8.72□□□□□ -1.01
CDCP1-202ENST00000425231 SPRR2BP35325 72 aa8.72□□□□□ -1.01
CDCP1-202ENST00000425231 SPRR2AP35326 72 aa8.72□□□□□ -1.01
CDCP1-202ENST00000425231 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.01
CDCP1-202ENST00000425231 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.01
CDCP1-202ENST00000425231 SNURFQ9Y675 71 aa8.71□□□□□ -1.02
CDCP1-202ENST00000425231 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
CDCP1-202ENST00000425231 KRTAP2-3P0C7H8 128 aa8.67□□□□□ -1.02
CDCP1-202ENST00000425231 KRTAP2-4Q9BYR9 128 aa8.67□□□□□ -1.02
CDCP1-202ENST00000425231 KRTAP10-7P60409 375 aaPredicted RBP8.65□□□□□ -1.02
CDCP1-202ENST00000425231 LCE1AQ5T7P2 110 aa8.63□□□□□ -1.03
CDCP1-202ENST00000425231 KRTAP10-12P60413 245 aa8.61□□□□□ -1.03
CDCP1-202ENST00000425231 SPANXA2-OT1Q8N9U9 137 aa8.61□□□□□ -1.03
CDCP1-202ENST00000425231 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
CDCP1-202ENST00000425231 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
CDCP1-202ENST00000425231 SPRR2DP22532 72 aa8.43□□□□□ -1.06
CDCP1-202ENST00000425231 KRTAP2-2Q9BYT5 123 aa8.4□□□□□ -1.06
CDCP1-202ENST00000425231 KRTAP2-1Q9BYU5 128 aa8.4□□□□□ -1.06
CDCP1-202ENST00000425231 COA5Q86WW8 74 aa8.37□□□□□ -1.07
CDCP1-202ENST00000425231 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
CDCP1-202ENST00000425231 COX7CP15954 63 aa8.25□□□□□ -1.09
CDCP1-202ENST00000425231 SEC61GP60059 68 aa8.21□□□□□ -1.09
CDCP1-202ENST00000425231 LCE3BQ5TA77 95 aa8.21□□□□□ -1.09
CDCP1-202ENST00000425231 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.09
CDCP1-202ENST00000425231 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
CDCP1-202ENST00000425231 A0A0D9SG42 100 aa8.17□□□□□ -1.1
CDCP1-202ENST00000425231 H7BZZ5 65 aa8.17□□□□□ -1.1
CDCP1-202ENST00000425231 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
CDCP1-202ENST00000425231 A0A1B0GU33 70 aa8.12□□□□□ -1.11
CDCP1-202ENST00000425231 KRTAP19-7Q3SYF9 63 aa8.12□□□□□ -1.11
CDCP1-202ENST00000425231 SPINT4Q6UDR6 99 aa8.06□□□□□ -1.12
CDCP1-202ENST00000425231 KRTAP12-1P59990 96 aa8.04□□□□□ -1.12
CDCP1-202ENST00000425231 MT1EP04732 61 aa8.03□□□□□ -1.12
CDCP1-202ENST00000425231 LCE5AQ5TCM9 118 aa8.03□□□□□ -1.12
CDCP1-202ENST00000425231 KRTAP19-3Q7Z4W3 81 aa7.97□□□□□ -1.13
CDCP1-202ENST00000425231 DSTQ03001 7570 aaKnown RBP7.96□□□□□ -1.14
CDCP1-202ENST00000425231 A0A1B0GU69 56 aa7.93□□□□□ -1.14
CDCP1-202ENST00000425231 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
CDCP1-202ENST00000425231 KRTAP19-5Q3LI72 72 aa7.87□□□□□ -1.15
CDCP1-202ENST00000425231 SMIM26A0A096LP01 95 aa7.86□□□□□ -1.15
CDCP1-202ENST00000425231 A8MU10 97 aa7.85□□□□□ -1.15
CDCP1-202ENST00000425231 MT1GP13640 62 aa7.78□□□□□ -1.16
CDCP1-202ENST00000425231 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
CDCP1-202ENST00000425231 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.17
CDCP1-202ENST00000425231 PP632Q6XCG6 107 aa7.68□□□□□ -1.18
CDCP1-202ENST00000425231 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
CDCP1-202ENST00000425231 MT1LQ93083 61 aa7.67□□□□□ -1.18
CDCP1-202ENST00000425231 ATP5EP56381 51 aaPredicted RBP7.66□□□□□ -1.18
CDCP1-202ENST00000425231 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
CDCP1-202ENST00000425231 TNP1P09430 55 aa7.65□□□□□ -1.18
CDCP1-202ENST00000425231 MT1MQ8N339 61 aa7.65□□□□□ -1.18
CDCP1-202ENST00000425231 PRR15LQ9BU68 103 aa7.63□□□□□ -1.19
CDCP1-202ENST00000425231 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
CDCP1-202ENST00000425231 LCE1DQ5T752 114 aa7.5□□□□□ -1.21
CDCP1-202ENST00000425231 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
CDCP1-202ENST00000425231 GPR98Q8WXG9 6306 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms