RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 MT1BP07438 61 aa8.03□□□□□ -1.12
GPC1-203ENST00000425056 ATOX1O00244 68 aa8.02□□□□□ -1.13
GPC1-203ENST00000425056 A6NN06 94 aa8□□□□□ -1.13
GPC1-203ENST00000425056 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
GPC1-203ENST00000425056 H0Y9P7 68 aa7.99□□□□□ -1.13
GPC1-203ENST00000425056 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
GPC1-203ENST00000425056 Q5VV11 94 aa7.99□□□□□ -1.13
GPC1-203ENST00000425056 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
GPC1-203ENST00000425056 C1orf64Q8NEQ6 169 aa7.99□□□□□ -1.13
GPC1-203ENST00000425056 LCA10Q71F78 164 aa7.98□□□□□ -1.13
GPC1-203ENST00000425056 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
GPC1-203ENST00000425056 MP68P56378 58 aa7.97□□□□□ -1.13
GPC1-203ENST00000425056 TRAV7A0A075B6U4 112 aa7.96□□□□□ -1.14
GPC1-203ENST00000425056 H3BPC8 53 aa7.94□□□□□ -1.14
GPC1-203ENST00000425056 LINC00208Q96KT6 92 aa7.91□□□□□ -1.14
GPC1-203ENST00000425056 CYP4F30PQ9H0H9 118 aa7.91□□□□□ -1.14
GPC1-203ENST00000425056 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
GPC1-203ENST00000425056 KLKP1Q107X0 134 aa7.89□□□□□ -1.15
GPC1-203ENST00000425056 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
GPC1-203ENST00000425056 NEBP20929 6669 aa7.86□□□□□ -1.15
GPC1-203ENST00000425056 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
GPC1-203ENST00000425056 MUC12Q9UKN1 5478 aa7.85□□□□□ -1.15
GPC1-203ENST00000425056 COX7CP15954 63 aa7.77□□□□□ -1.17
GPC1-203ENST00000425056 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
GPC1-203ENST00000425056 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
GPC1-203ENST00000425056 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
GPC1-203ENST00000425056 C20orf197Q8N268 126 aa7.75□□□□□ -1.17
GPC1-203ENST00000425056 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
GPC1-203ENST00000425056 KRTAP20-1Q3LI63 56 aa7.68□□□□□ -1.18
GPC1-203ENST00000425056 A8MUN3 132 aa7.67□□□□□ -1.18
GPC1-203ENST00000425056 KMT2DO14686 5537 aa7.66□□□□□ -1.18
GPC1-203ENST00000425056 H0YAA0 97 aa7.65□□□□□ -1.18
GPC1-203ENST00000425056 NDUFC1O43677 76 aa7.62□□□□□ -1.19
GPC1-203ENST00000425056 MDN1Q9NU22 5596 aa7.61□□□□□ -1.19
GPC1-203ENST00000425056 SPANXA2-OT1Q8N9U9 137 aa7.59□□□□□ -1.19
GPC1-203ENST00000425056 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
GPC1-203ENST00000425056 CCDC179H3BU77 68 aa7.54□□□□□ -1.2
GPC1-203ENST00000425056 H7BZZ5 65 aa7.53□□□□□ -1.2
GPC1-203ENST00000425056 ACYP2P14621 99 aa7.52□□□□□ -1.21
GPC1-203ENST00000425056 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
GPC1-203ENST00000425056 CYSTM1Q9H1C7 97 aa7.51□□□□□ -1.21
GPC1-203ENST00000425056 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
GPC1-203ENST00000425056 MT1XP80297 61 aa7.47□□□□□ -1.21
GPC1-203ENST00000425056 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
GPC1-203ENST00000425056 KRTAP2-3P0C7H8 128 aa7.42□□□□□ -1.22
GPC1-203ENST00000425056 KRTAP2-4Q9BYR9 128 aa7.42□□□□□ -1.22
GPC1-203ENST00000425056 CHKB-CPT1BH3BT56 60 aa7.39□□□□□ -1.23
GPC1-203ENST00000425056 SPRR2EP22531 72 aa7.39□□□□□ -1.23
GPC1-203ENST00000425056 SPRR2BP35325 72 aa7.39□□□□□ -1.23
GPC1-203ENST00000425056 SPRR2AP35326 72 aa7.39□□□□□ -1.23
GPC1-203ENST00000425056 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
GPC1-203ENST00000425056 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
GPC1-203ENST00000425056 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
GPC1-203ENST00000425056 TMEM258P61165 79 aa7.35□□□□□ -1.23
GPC1-203ENST00000425056 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
GPC1-203ENST00000425056 R4GN34 69 aa7.35□□□□□ -1.23
GPC1-203ENST00000425056 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
GPC1-203ENST00000425056 P0C880 135 aa7.33□□□□□ -1.24
GPC1-203ENST00000425056 PCP4P48539 62 aa7.33□□□□□ -1.24
GPC1-203ENST00000425056 COA5Q86WW8 74 aa7.33□□□□□ -1.24
GPC1-203ENST00000425056 M0QZ58 72 aa7.28□□□□□ -1.24
GPC1-203ENST00000425056 LCE1AQ5T7P2 110 aa7.28□□□□□ -1.24
GPC1-203ENST00000425056 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
GPC1-203ENST00000425056 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
GPC1-203ENST00000425056 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
GPC1-203ENST00000425056 LINC01554Q52M75 96 aa7.17□□□□□ -1.26
GPC1-203ENST00000425056 KRTAP2-2Q9BYT5 123 aa7.17□□□□□ -1.26
GPC1-203ENST00000425056 KRTAP2-1Q9BYU5 128 aa7.17□□□□□ -1.26
GPC1-203ENST00000425056 SPRR2DP22532 72 aa7.14□□□□□ -1.27
GPC1-203ENST00000425056 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
GPC1-203ENST00000425056 SERP1Q9Y6X1 66 aa7.11□□□□□ -1.27
GPC1-203ENST00000425056 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
GPC1-203ENST00000425056 SEC61GP60059 68 aa7.08□□□□□ -1.28
GPC1-203ENST00000425056 A0A1B0GU69 56 aa6.96□□□□□ -1.3
GPC1-203ENST00000425056 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
GPC1-203ENST00000425056 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
GPC1-203ENST00000425056 RPS28P62857 69 aaKnown RBP6.94□□□□□ -1.3
GPC1-203ENST00000425056 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
GPC1-203ENST00000425056 V9GYY9 64 aa6.9□□□□□ -1.3
GPC1-203ENST00000425056 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
GPC1-203ENST00000425056 A0A1B0GU33 70 aa6.85□□□□□ -1.31
GPC1-203ENST00000425056 Q1T7F1 81 aa6.82□□□□□ -1.32
GPC1-203ENST00000425056 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
GPC1-203ENST00000425056 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
GPC1-203ENST00000425056 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
GPC1-203ENST00000425056 UQCR11O14957 56 aa6.69□□□□□ -1.34
GPC1-203ENST00000425056 PSPHP1O15172 72 aa6.69□□□□□ -1.34
GPC1-203ENST00000425056 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
GPC1-203ENST00000425056 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
GPC1-203ENST00000425056 MT1EP04732 61 aa6.64□□□□□ -1.35
GPC1-203ENST00000425056 A0A0D9SG42 100 aa6.63□□□□□ -1.35
GPC1-203ENST00000425056 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
GPC1-203ENST00000425056 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
GPC1-203ENST00000425056 A8MU10 97 aa6.56□□□□□ -1.36
GPC1-203ENST00000425056 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
GPC1-203ENST00000425056 A6NED7 52 aa6.53□□□□□ -1.36
GPC1-203ENST00000425056 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
GPC1-203ENST00000425056 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
GPC1-203ENST00000425056 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
GPC1-203ENST00000425056 GPR98Q8WXG9 6306 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms