RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
USB1-202ENST00000423271 SCGB1A1P11684 91 aa7.12□□□□□ -1.27
USB1-202ENST00000423271 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
USB1-202ENST00000423271 MP68P56378 58 aa7.09□□□□□ -1.27
USB1-202ENST00000423271 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
USB1-202ENST00000423271 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
USB1-202ENST00000423271 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
USB1-202ENST00000423271 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
USB1-202ENST00000423271 S4R3F8 94 aa7.03□□□□□ -1.28
USB1-202ENST00000423271 H3BPC8 53 aa7.02□□□□□ -1.29
USB1-202ENST00000423271 LCA10Q71F78 164 aa6.99□□□□□ -1.29
USB1-202ENST00000423271 TRAV7A0A075B6U4 112 aa6.98□□□□□ -1.29
USB1-202ENST00000423271 SMIM20Q8N5G0 67 aa6.98□□□□□ -1.29
USB1-202ENST00000423271 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
USB1-202ENST00000423271 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
USB1-202ENST00000423271 A8MUN3 132 aa6.91□□□□□ -1.3
USB1-202ENST00000423271 MT1BP07438 61 aa6.85□□□□□ -1.31
USB1-202ENST00000423271 PCP4P48539 62 aa6.84□□□□□ -1.31
USB1-202ENST00000423271 SERP2Q8N6R1 65 aa6.84□□□□□ -1.31
USB1-202ENST00000423271 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
USB1-202ENST00000423271 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
USB1-202ENST00000423271 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
USB1-202ENST00000423271 NDUFC1O43677 76 aa6.82□□□□□ -1.32
USB1-202ENST00000423271 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
USB1-202ENST00000423271 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
USB1-202ENST00000423271 Q5VV11 94 aa6.8□□□□□ -1.32
USB1-202ENST00000423271 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
USB1-202ENST00000423271 NEBP20929 6669 aa6.77□□□□□ -1.33
USB1-202ENST00000423271 A6NN06 94 aa6.77□□□□□ -1.33
USB1-202ENST00000423271 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
USB1-202ENST00000423271 COX7CP15954 63 aa6.71□□□□□ -1.34
USB1-202ENST00000423271 ACYP2P14621 99 aa6.7□□□□□ -1.34
USB1-202ENST00000423271 H0YAA0 97 aa6.69□□□□□ -1.34
USB1-202ENST00000423271 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
USB1-202ENST00000423271 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
USB1-202ENST00000423271 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
USB1-202ENST00000423271 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
USB1-202ENST00000423271 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
USB1-202ENST00000423271 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
USB1-202ENST00000423271 CYSTM1Q9H1C7 97 aa6.6□□□□□ -1.35
USB1-202ENST00000423271 CHKB-CPT1BH3BT56 60 aa6.59□□□□□ -1.35
USB1-202ENST00000423271 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
USB1-202ENST00000423271 SPTSSBQ8NFR3 76 aa6.56□□□□□ -1.36
USB1-202ENST00000423271 KMT2DO14686 5537 aa6.56□□□□□ -1.36
USB1-202ENST00000423271 H7BZZ5 65 aa6.55□□□□□ -1.36
USB1-202ENST00000423271 P0C880 135 aa6.54□□□□□ -1.36
USB1-202ENST00000423271 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
USB1-202ENST00000423271 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
USB1-202ENST00000423271 COA5Q86WW8 74 aa6.5□□□□□ -1.37
USB1-202ENST00000423271 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
USB1-202ENST00000423271 R4GN34 69 aa6.45□□□□□ -1.38
USB1-202ENST00000423271 M0QZ58 72 aa6.43□□□□□ -1.38
USB1-202ENST00000423271 MT1XP80297 61 aa6.4□□□□□ -1.38
USB1-202ENST00000423271 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
USB1-202ENST00000423271 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
USB1-202ENST00000423271 PLAC4Q8WY50 150 aa6.35□□□□□ -1.39
USB1-202ENST00000423271 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
USB1-202ENST00000423271 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
USB1-202ENST00000423271 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
USB1-202ENST00000423271 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
USB1-202ENST00000423271 SEC61GP60059 68 aa6.24□□□□□ -1.41
USB1-202ENST00000423271 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
USB1-202ENST00000423271 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
USB1-202ENST00000423271 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
USB1-202ENST00000423271 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
USB1-202ENST00000423271 TMEM258P61165 79 aa6.23□□□□□ -1.41
USB1-202ENST00000423271 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
USB1-202ENST00000423271 SPRR2EP22531 72 aa6.21□□□□□ -1.42
USB1-202ENST00000423271 SPRR2BP35325 72 aa6.21□□□□□ -1.42
USB1-202ENST00000423271 SPRR2AP35326 72 aa6.21□□□□□ -1.42
USB1-202ENST00000423271 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
USB1-202ENST00000423271 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
USB1-202ENST00000423271 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
USB1-202ENST00000423271 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
USB1-202ENST00000423271 A0A1B0GU69 56 aa6.14□□□□□ -1.43
USB1-202ENST00000423271 A0A1B0GU33 70 aa6.13□□□□□ -1.43
USB1-202ENST00000423271 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
USB1-202ENST00000423271 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
USB1-202ENST00000423271 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
USB1-202ENST00000423271 A0A0D9SG42 100 aa6.06□□□□□ -1.44
USB1-202ENST00000423271 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
USB1-202ENST00000423271 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
USB1-202ENST00000423271 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
USB1-202ENST00000423271 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
USB1-202ENST00000423271 SPRR2DP22532 72 aa6.01□□□□□ -1.45
USB1-202ENST00000423271 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
USB1-202ENST00000423271 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
USB1-202ENST00000423271 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
USB1-202ENST00000423271 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
USB1-202ENST00000423271 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
USB1-202ENST00000423271 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
USB1-202ENST00000423271 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
USB1-202ENST00000423271 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
USB1-202ENST00000423271 A8MU10 97 aa5.94□□□□□ -1.46
USB1-202ENST00000423271 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
USB1-202ENST00000423271 UQCR11O14957 56 aa5.83□□□□□ -1.48
USB1-202ENST00000423271 Q1T7F1 81 aa5.82□□□□□ -1.48
USB1-202ENST00000423271 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
USB1-202ENST00000423271 V9GYY9 64 aa5.82□□□□□ -1.48
USB1-202ENST00000423271 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms