RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
LEMD2-202ENST00000421671 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
LEMD2-202ENST00000421671 H1FX-AS1Q4G0G2 97 aa11.63□□□□□ -0.55
LEMD2-202ENST00000421671 FLG2Q5D862 2391 aaPredicted RBP11.61□□□□□ -0.55
LEMD2-202ENST00000421671 TNXBP22105 4242 aa11.59□□□□□ -0.55
LEMD2-202ENST00000421671 FAT3Q8TDW7 4589 aa11.55□□□□□ -0.56
LEMD2-202ENST00000421671 K7ERS5 55 aa11.53□□□□□ -0.56
LEMD2-202ENST00000421671 KRTAP10-8P60410 259 aa11.5□□□□□ -0.57
LEMD2-202ENST00000421671 KRTAP3-1Q9BYR8 98 aa11.47□□□□□ -0.57
LEMD2-202ENST00000421671 MYCBP2O75592 4640 aa11.43□□□□□ -0.58
LEMD2-202ENST00000421671 CRIPTQ9P021 101 aa11.4□□□□□ -0.59
LEMD2-202ENST00000421671 P0C880 135 aa11.36□□□□□ -0.59
LEMD2-202ENST00000421671 COX6B2Q6YFQ2 88 aa11.36□□□□□ -0.59
LEMD2-202ENST00000421671 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
LEMD2-202ENST00000421671 KRTAP4-5Q9BYR2 181 aa11.26□□□□□ -0.61
LEMD2-202ENST00000421671 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
LEMD2-202ENST00000421671 RPL37P61927 97 aaKnown RBP11.21□□□□□ -0.62
LEMD2-202ENST00000421671 XP32Q5T750 250 aa11.18□□□□□ -0.62
LEMD2-202ENST00000421671 SPINT4Q6UDR6 99 aa11.13□□□□□ -0.63
LEMD2-202ENST00000421671 TPRXLQ17RH7 258 aa11.1□□□□□ -0.63
LEMD2-202ENST00000421671 KRTAP10-6P60371 365 aaPredicted RBP11.07□□□□□ -0.64
LEMD2-202ENST00000421671 ABCA13Q86UQ4 5058 aa11.04□□□□□ -0.64
LEMD2-202ENST00000421671 KRTAP13-4Q3LI77 160 aa11.01□□□□□ -0.65
LEMD2-202ENST00000421671 A0A0D9SG42 100 aa10.98□□□□□ -0.65
LEMD2-202ENST00000421671 KRTAP15-1Q3LI76 137 aa10.95□□□□□ -0.66
LEMD2-202ENST00000421671 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
LEMD2-202ENST00000421671 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
LEMD2-202ENST00000421671 C10orf95Q9H7T3 257 aa10.91□□□□□ -0.66
LEMD2-202ENST00000421671 LPAP08519 4548 aa10.91□□□□□ -0.66
LEMD2-202ENST00000421671 BIRC6Q9NR09 4857 aa10.89□□□□□ -0.67
LEMD2-202ENST00000421671 HERC2O95714 4834 aa10.88□□□□□ -0.67
LEMD2-202ENST00000421671 NDUFAF8A1L188 74 aa10.87□□□□□ -0.67
LEMD2-202ENST00000421671 LRP2P98164 4655 aa10.87□□□□□ -0.67
LEMD2-202ENST00000421671 S4R3F8 94 aa10.82□□□□□ -0.68
LEMD2-202ENST00000421671 KRTAP12-2P59991 146 aa10.73□□□□□ -0.69
LEMD2-202ENST00000421671 J3QL48 77 aa10.71□□□□□ -0.69
LEMD2-202ENST00000421671 KRTAP12-1P59990 96 aa10.63□□□□□ -0.71
LEMD2-202ENST00000421671 PCLOQ9Y6V0 5065 aa10.54□□□□□ -0.72
LEMD2-202ENST00000421671 M0QZ58 72 aa10.47□□□□□ -0.73
LEMD2-202ENST00000421671 MUC17Q685J3 4493 aa10.46□□□□□ -0.74
LEMD2-202ENST00000421671 HERC1Q15751 4861 aa10.43□□□□□ -0.74
LEMD2-202ENST00000421671 SEC61BP60468 96 aaKnown RBP10.41□□□□□ -0.74
LEMD2-202ENST00000421671 KRTAP4-1Q9BYQ7 146 aa10.39□□□□□ -0.75
LEMD2-202ENST00000421671 HMCN2Q8NDA2 5059 aa10.23□□□□□ -0.77
LEMD2-202ENST00000421671 MUC2Q02817 5179 aa10.22□□□□□ -0.77
LEMD2-202ENST00000421671 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
LEMD2-202ENST00000421671 KRTAP19-2Q3LHN2 52 aa10.19□□□□□ -0.78
LEMD2-202ENST00000421671 A0A0A0MQY5 61 aa10.1□□□□□ -0.79
LEMD2-202ENST00000421671 LUZP6Q538Z0 58 aa10.05□□□□□ -0.8
LEMD2-202ENST00000421671 R4GN34 69 aa10.03□□□□□ -0.8
LEMD2-202ENST00000421671 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
LEMD2-202ENST00000421671 FLGP20930 4061 aaPredicted RBP9.9□□□□□ -0.82
LEMD2-202ENST00000421671 PP632Q6XCG6 107 aa9.88□□□□□ -0.83
LEMD2-202ENST00000421671 UBR4Q5T4S7 5183 aa9.86□□□□□ -0.83
LEMD2-202ENST00000421671 RNF213Q63HN8 5207 aa9.81□□□□□ -0.84
LEMD2-202ENST00000421671 FAT4Q6V0I7 4981 aa9.76□□□□□ -0.85
LEMD2-202ENST00000421671 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
LEMD2-202ENST00000421671 CAMK2N1Q7Z7J9 78 aa9.59□□□□□ -0.87
LEMD2-202ENST00000421671 MT1HP80294 61 aa9.46□□□□□ -0.9
LEMD2-202ENST00000421671 KRTAP23-1A1A580 65 aa9.42□□□□□ -0.9
LEMD2-202ENST00000421671 SPRR5A0A1B0GTR4 108 aa9.42□□□□□ -0.9
LEMD2-202ENST00000421671 M0R2T5 61 aa9.42□□□□□ -0.9
LEMD2-202ENST00000421671 TNP1P09430 55 aa9.34□□□□□ -0.91
LEMD2-202ENST00000421671 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.92
LEMD2-202ENST00000421671 KRTAP19-1Q8IUB9 90 aa9.26□□□□□ -0.93
LEMD2-202ENST00000421671 MT2AP02795 61 aa9.19□□□□□ -0.94
LEMD2-202ENST00000421671 MT1FP04733 61 aa9.17□□□□□ -0.94
LEMD2-202ENST00000421671 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
LEMD2-202ENST00000421671 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
LEMD2-202ENST00000421671 PRO2289Q9P1D8 64 aa8.98□□□□□ -0.97
LEMD2-202ENST00000421671 KRTAP19-8Q3LI54 63 aa8.92□□□□□ -0.98
LEMD2-202ENST00000421671 MT1BP07438 61 aa8.83□□□□□ -1
LEMD2-202ENST00000421671 INE1O15225 51 aa8.81□□□□□ -1
LEMD2-202ENST00000421671 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
LEMD2-202ENST00000421671 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
LEMD2-202ENST00000421671 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
LEMD2-202ENST00000421671 KRTAP10-5P60370 271 aa8.7□□□□□ -1.02
LEMD2-202ENST00000421671 MT1XP80297 61 aa8.69□□□□□ -1.02
LEMD2-202ENST00000421671 LCE2BO14633 110 aa8.58□□□□□ -1.04
LEMD2-202ENST00000421671 KRTAP8-1Q8IUC2 63 aa8.56□□□□□ -1.04
LEMD2-202ENST00000421671 USH2AO75445 5202 aa8.52□□□□□ -1.05
LEMD2-202ENST00000421671 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
LEMD2-202ENST00000421671 KRTAP10-12P60413 245 aa8.4□□□□□ -1.07
LEMD2-202ENST00000421671 KRTAP12-3P60328 96 aa8.3□□□□□ -1.08
LEMD2-202ENST00000421671 KMT2DO14686 5537 aa8.1□□□□□ -1.11
LEMD2-202ENST00000421671 SSPOA2VEC9 5147 aa8.06□□□□□ -1.12
LEMD2-202ENST00000421671 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
LEMD2-202ENST00000421671 KRTAP19-5Q3LI72 72 aa8.01□□□□□ -1.13
LEMD2-202ENST00000421671 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
LEMD2-202ENST00000421671 KRTAP4-8Q9BYQ9 185 aa7.97□□□□□ -1.13
LEMD2-202ENST00000421671 LCE3CQ5T5A8 94 aa7.86□□□□□ -1.15
LEMD2-202ENST00000421671 KRTAP19-6Q3LI70 58 aa7.79□□□□□ -1.16
LEMD2-202ENST00000421671 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
LEMD2-202ENST00000421671 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
LEMD2-202ENST00000421671 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
LEMD2-202ENST00000421671 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.19
LEMD2-202ENST00000421671 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
LEMD2-202ENST00000421671 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
LEMD2-202ENST00000421671 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
LEMD2-202ENST00000421671 KRTAP9-6A8MVA2 160 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms