RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 TACC2O95359 2948 aa0.89□□□□□ -2.27
VPS8-202ENST00000421069 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
VPS8-202ENST00000421069 CSPG4Q6UVK1 2322 aa0.89□□□□□ -2.27
VPS8-202ENST00000421069 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
VPS8-202ENST00000421069 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 RPL39LQ96EH5 51 aaKnown RBP0.88□□□□□ -2.27
VPS8-202ENST00000421069 ACANP16112 2415 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 CENPEQ02224 2701 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 SPRR1AP35321 89 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 LINC01556Q5JQF7 62 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 BSNQ9UPA5 3926 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 A0A096LNI7 61 aa0.86□□□□□ -2.27
VPS8-202ENST00000421069 RPL39P62891 51 aaKnown RBP0.86□□□□□ -2.27
VPS8-202ENST00000421069 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
VPS8-202ENST00000421069 MTORP42345 2549 aa0.86□□□□□ -2.27
VPS8-202ENST00000421069 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
VPS8-202ENST00000421069 CUBNO60494 3623 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 DNHD1Q96M86 4753 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 KLK9Q2XQG4 91 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 WNK2Q9Y3S1 2297 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 H3BNG1 76 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 M0QY20 66 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 SPRR1BP22528 89 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 PRLHP81277 87 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 SVEP1Q4LDE5 3571 aa0.84□□□□□ -2.28
VPS8-202ENST00000421069 AKAP9Q99996 3911 aa0.84□□□□□ -2.28
VPS8-202ENST00000421069 WNK1Q9H4A3 2382 aa0.84□□□□□ -2.28
VPS8-202ENST00000421069 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
VPS8-202ENST00000421069 POLR2KP53803 58 aaKnown RBP0.83□□□□□ -2.28
VPS8-202ENST00000421069 NSD1Q96L73 2696 aaPredicted RBP0.83□□□□□ -2.28
VPS8-202ENST00000421069 TLN2Q9Y4G6 2542 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 ZANQ9Y493 2812 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 ATRQ13535 2644 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 STAB1Q9NY15 2570 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 MXRA5Q9NR99 2828 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 IGLV5-48A0A075B6I7 105 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 MMP24-AS1A0A0U1RRL7 71 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 A8MTW9 85 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 SPINK6Q6UWN8 80 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 NBEAL1Q6ZS30 2694 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 TENM2Q9NT68 2774 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 ANK3Q12955 4377 aaKnown RBP0.81□□□□□ -2.28
VPS8-202ENST00000421069 C9orf92A6NGG3 77 aa0.81□□□□□ -2.28
VPS8-202ENST00000421069 M0R2T5 61 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 VWFP04275 2813 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 VPS13CQ709C8 3753 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
VPS8-202ENST00000421069 S4R3F8 94 aa0.79□□□□□ -2.28
VPS8-202ENST00000421069 TGP01266 2768 aa0.78□□□□□ -2.29
VPS8-202ENST00000421069 PKD1L1Q8TDX9 2849 aa0.78□□□□□ -2.29
VPS8-202ENST00000421069 NBEAL2Q6ZNJ1 2754 aa0.77□□□□□ -2.29
VPS8-202ENST00000421069 SPINK1P00995 79 aa0.76□□□□□ -2.29
VPS8-202ENST00000421069 RYR3Q15413 4870 aa0.76□□□□□ -2.29
VPS8-202ENST00000421069 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
VPS8-202ENST00000421069 MT1HL1P0DM35 61 aa0.75□□□□□ -2.29
VPS8-202ENST00000421069 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
VPS8-202ENST00000421069 RYR2Q92736 4967 aa0.74□□□□□ -2.29
VPS8-202ENST00000421069 BIRC6Q9NR09 4857 aa0.74□□□□□ -2.29
VPS8-202ENST00000421069 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
VPS8-202ENST00000421069 KMT2CQ8NEZ4 4911 aaKnown RBP0.74□□□□□ -2.29
VPS8-202ENST00000421069 COL7A1Q02388 2944 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 TRRAPQ9Y4A5 3859 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 HYDINQ4G0P3 5121 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 KIAA1109Q2LD37 5005 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 PCLOQ9Y6V0 5065 aa0.72□□□□□ -2.29
VPS8-202ENST00000421069 HUWE1Q7Z6Z7 4374 aaKnown RBP0.72□□□□□ -2.29
VPS8-202ENST00000421069 ANK2Q01484 3957 aa0.72□□□□□ -2.29
VPS8-202ENST00000421069 AHNAKQ09666 5890 aaKnown RBP0.71□□□□□ -2.3
VPS8-202ENST00000421069 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
VPS8-202ENST00000421069 PRKDCP78527 4128 aaKnown RBP0.71□□□□□ -2.3
VPS8-202ENST00000421069 DNAH11Q96DT5 4516 aa0.71□□□□□ -2.3
VPS8-202ENST00000421069 DNAH9Q9NYC9 4486 aa0.7□□□□□ -2.3
VPS8-202ENST00000421069 HERC2O95714 4834 aa0.69□□□□□ -2.3
VPS8-202ENST00000421069 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
VPS8-202ENST00000421069 ABCA13Q86UQ4 5058 aa0.69□□□□□ -2.3
VPS8-202ENST00000421069 VPS13DQ5THJ4 4388 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 SACSQ9NZJ4 4579 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 RYR1P21817 5038 aa0.67□□□□□ -2.3
VPS8-202ENST00000421069 DYNC1H1Q14204 4646 aaKnown RBP0.67□□□□□ -2.3
VPS8-202ENST00000421069 PLECQ15149 4684 aaKnown RBP0.66□□□□□ -2.3
VPS8-202ENST00000421069 RPS29P62273 56 aaKnown RBP0.66□□□□□ -2.3
VPS8-202ENST00000421069 MT1HP80294 61 aa0.66□□□□□ -2.3
VPS8-202ENST00000421069 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
VPS8-202ENST00000421069 FSIP2Q5CZC0 6907 aa0.65□□□□□ -2.3
VPS8-202ENST00000421069 MYCBP2O75592 4640 aa0.65□□□□□ -2.3
VPS8-202ENST00000421069 UBR4Q5T4S7 5183 aa0.65□□□□□ -2.3
VPS8-202ENST00000421069 DMBT1Q9UGM3 2413 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms