RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
CPNE1-211ENST00000420363 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
CPNE1-211ENST00000420363 FAM236AA0A1B0GUQ0 79 aa9.82□□□□□ -0.84
CPNE1-211ENST00000420363 FAM236BA0A1B0GV22 79 aa9.82□□□□□ -0.84
CPNE1-211ENST00000420363 A8MUN3 132 aa9.8□□□□□ -0.84
CPNE1-211ENST00000420363 H3BPC8 53 aa9.77□□□□□ -0.85
CPNE1-211ENST00000420363 KLKP1Q107X0 134 aa9.75□□□□□ -0.85
CPNE1-211ENST00000420363 IMUPQ9GZP8 106 aa9.75□□□□□ -0.85
CPNE1-211ENST00000420363 K7ERU9 68 aa9.74□□□□□ -0.85
CPNE1-211ENST00000420363 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
CPNE1-211ENST00000420363 KRTAP6-3Q3LI67 103 aa9.71□□□□□ -0.86
CPNE1-211ENST00000420363 NDUFC1O43677 76 aa9.69□□□□□ -0.86
CPNE1-211ENST00000420363 SPRR2GQ9BYE4 73 aa9.67□□□□□ -0.86
CPNE1-211ENST00000420363 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
CPNE1-211ENST00000420363 H0YAA0 97 aa9.63□□□□□ -0.87
CPNE1-211ENST00000420363 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
CPNE1-211ENST00000420363 KRTAP19-8Q3LI54 63 aa9.58□□□□□ -0.88
CPNE1-211ENST00000420363 SMIM20Q8N5G0 67 aa9.58□□□□□ -0.88
CPNE1-211ENST00000420363 DMAC1Q96GE9 116 aa9.57□□□□□ -0.88
CPNE1-211ENST00000420363 Q5VV11 94 aa9.55□□□□□ -0.88
CPNE1-211ENST00000420363 MT1BP07438 61 aa9.53□□□□□ -0.88
CPNE1-211ENST00000420363 TRAV7A0A075B6U4 112 aa9.52□□□□□ -0.89
CPNE1-211ENST00000420363 A6NN06 94 aa9.43□□□□□ -0.9
CPNE1-211ENST00000420363 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
CPNE1-211ENST00000420363 NEBP20929 6669 aa9.38□□□□□ -0.91
CPNE1-211ENST00000420363 ACYP2P14621 99 aa9.33□□□□□ -0.92
CPNE1-211ENST00000420363 C20orf197Q8N268 126 aa9.32□□□□□ -0.92
CPNE1-211ENST00000420363 KRTAP10-5P60370 271 aa9.3□□□□□ -0.92
CPNE1-211ENST00000420363 MUC12Q9UKN1 5478 aa9.3□□□□□ -0.92
CPNE1-211ENST00000420363 SERP2Q8N6R1 65 aa9.26□□□□□ -0.93
CPNE1-211ENST00000420363 SNURFQ9Y675 71 aa9.26□□□□□ -0.93
CPNE1-211ENST00000420363 P0C880 135 aa9.24□□□□□ -0.93
CPNE1-211ENST00000420363 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
CPNE1-211ENST00000420363 R4GN34 69 aa9.22□□□□□ -0.93
CPNE1-211ENST00000420363 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
CPNE1-211ENST00000420363 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
CPNE1-211ENST00000420363 KRTAP20-1Q3LI63 56 aa9.17□□□□□ -0.94
CPNE1-211ENST00000420363 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
CPNE1-211ENST00000420363 M0QZ58 72 aa9.13□□□□□ -0.95
CPNE1-211ENST00000420363 KRTAP5-9P26371 169 aa9.09□□□□□ -0.95
CPNE1-211ENST00000420363 PLAC4Q8WY50 150 aa9.06□□□□□ -0.96
CPNE1-211ENST00000420363 KMT2DO14686 5537 aa9.05□□□□□ -0.96
CPNE1-211ENST00000420363 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
CPNE1-211ENST00000420363 COX7CP15954 63 aa9.01□□□□□ -0.97
CPNE1-211ENST00000420363 MDN1Q9NU22 5596 aa9.01□□□□□ -0.97
CPNE1-211ENST00000420363 MT1XP80297 61 aa8.98□□□□□ -0.97
CPNE1-211ENST00000420363 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
CPNE1-211ENST00000420363 COA5Q86WW8 74 aa8.9□□□□□ -0.98
CPNE1-211ENST00000420363 H7BZZ5 65 aa8.85□□□□□ -0.99
CPNE1-211ENST00000420363 KRTAP2-3P0C7H8 128 aa8.85□□□□□ -0.99
CPNE1-211ENST00000420363 KRTAP2-4Q9BYR9 128 aa8.85□□□□□ -0.99
CPNE1-211ENST00000420363 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
CPNE1-211ENST00000420363 KRTAP12-2P59991 146 aa8.79□□□□□ -1
CPNE1-211ENST00000420363 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
CPNE1-211ENST00000420363 ANAPC13Q9BS18 74 aa8.75□□□□□ -1.01
CPNE1-211ENST00000420363 SPRR2EP22531 72 aa8.74□□□□□ -1.01
CPNE1-211ENST00000420363 SPRR2BP35325 72 aa8.74□□□□□ -1.01
CPNE1-211ENST00000420363 SPRR2AP35326 72 aa8.74□□□□□ -1.01
CPNE1-211ENST00000420363 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
CPNE1-211ENST00000420363 SEC61GP60059 68 aa8.68□□□□□ -1.02
CPNE1-211ENST00000420363 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
CPNE1-211ENST00000420363 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
CPNE1-211ENST00000420363 KRTAP10-12P60413 245 aa8.56□□□□□ -1.04
CPNE1-211ENST00000420363 CCDC179H3BU77 68 aa8.55□□□□□ -1.04
CPNE1-211ENST00000420363 KRTAP10-7P60409 375 aaPredicted RBP8.55□□□□□ -1.04
CPNE1-211ENST00000420363 LCE1AQ5T7P2 110 aa8.55□□□□□ -1.04
CPNE1-211ENST00000420363 KRTAP2-2Q9BYT5 123 aa8.55□□□□□ -1.04
CPNE1-211ENST00000420363 KRTAP2-1Q9BYU5 128 aa8.55□□□□□ -1.04
CPNE1-211ENST00000420363 ATP5EP56381 51 aaPredicted RBP8.52□□□□□ -1.05
CPNE1-211ENST00000420363 A0A1B0GU33 70 aa8.5□□□□□ -1.05
CPNE1-211ENST00000420363 KRTAP4-8A0A0G2JLE6 195 aa8.48□□□□□ -1.05
CPNE1-211ENST00000420363 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
CPNE1-211ENST00000420363 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
CPNE1-211ENST00000420363 SPRR2DP22532 72 aa8.46□□□□□ -1.06
CPNE1-211ENST00000420363 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
CPNE1-211ENST00000420363 A0A1B0GU69 56 aa8.43□□□□□ -1.06
CPNE1-211ENST00000420363 A0A0D9SG42 100 aa8.42□□□□□ -1.06
CPNE1-211ENST00000420363 TMEM258P61165 79 aa8.32□□□□□ -1.08
CPNE1-211ENST00000420363 KRTAP12-1P59990 96 aa8.31□□□□□ -1.08
CPNE1-211ENST00000420363 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
CPNE1-211ENST00000420363 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
CPNE1-211ENST00000420363 PRR15LQ9BU68 103 aa8.27□□□□□ -1.09
CPNE1-211ENST00000420363 LCE3BQ5TA77 95 aa8.25□□□□□ -1.09
CPNE1-211ENST00000420363 LINC01558Q9Y6Z2 57 aa8.21□□□□□ -1.1
CPNE1-211ENST00000420363 A8MU10 97 aa8.16□□□□□ -1.1
CPNE1-211ENST00000420363 KRTAP19-7Q3SYF9 63 aa8.03□□□□□ -1.12
CPNE1-211ENST00000420363 UQCR11O14957 56 aa7.98□□□□□ -1.13
CPNE1-211ENST00000420363 MT1EP04732 61 aa7.96□□□□□ -1.14
CPNE1-211ENST00000420363 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
CPNE1-211ENST00000420363 TNP1P09430 55 aa7.89□□□□□ -1.15
CPNE1-211ENST00000420363 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
CPNE1-211ENST00000420363 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
CPNE1-211ENST00000420363 GPR98Q8WXG9 6306 aa7.87□□□□□ -1.15
CPNE1-211ENST00000420363 KRTAP19-3Q7Z4W3 81 aa7.86□□□□□ -1.15
CPNE1-211ENST00000420363 V9GYY9 64 aa7.85□□□□□ -1.15
CPNE1-211ENST00000420363 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
CPNE1-211ENST00000420363 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
CPNE1-211ENST00000420363 Q1T7F1 81 aa7.78□□□□□ -1.16
CPNE1-211ENST00000420363 KRTAP4-9Q9BYQ8 210 aa7.78□□□□□ -1.16
CPNE1-211ENST00000420363 LCE3AQ5TA76 89 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms