RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 H0Y9P7 68 aa4.46□□□□□ -1.7
CTSA-205ENST00000419493 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
CTSA-205ENST00000419493 ATOX1O00244 68 aa4.45□□□□□ -1.7
CTSA-205ENST00000419493 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
CTSA-205ENST00000419493 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
CTSA-205ENST00000419493 USH2AO75445 5202 aa4.43□□□□□ -1.7
CTSA-205ENST00000419493 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
CTSA-205ENST00000419493 H3BS24 57 aa4.42□□□□□ -1.7
CTSA-205ENST00000419493 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
CTSA-205ENST00000419493 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
CTSA-205ENST00000419493 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
CTSA-205ENST00000419493 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
CTSA-205ENST00000419493 LINC00208Q96KT6 92 aa4.41□□□□□ -1.7
CTSA-205ENST00000419493 MP68P56378 58 aa4.39□□□□□ -1.71
CTSA-205ENST00000419493 NDUFC1O43677 76 aa4.38□□□□□ -1.71
CTSA-205ENST00000419493 KLKP1Q107X0 134 aa4.38□□□□□ -1.71
CTSA-205ENST00000419493 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CTSA-205ENST00000419493 Q5VV11 94 aa4.36□□□□□ -1.71
CTSA-205ENST00000419493 OCR1Q9BZK8 76 aa4.36□□□□□ -1.71
CTSA-205ENST00000419493 A8MUN3 132 aa4.35□□□□□ -1.71
CTSA-205ENST00000419493 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
CTSA-205ENST00000419493 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
CTSA-205ENST00000419493 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
CTSA-205ENST00000419493 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
CTSA-205ENST00000419493 SMIM20Q8N5G0 67 aa4.32□□□□□ -1.72
CTSA-205ENST00000419493 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
CTSA-205ENST00000419493 CRIPTQ9P021 101 aa4.31□□□□□ -1.72
CTSA-205ENST00000419493 A6NN06 94 aa4.3□□□□□ -1.72
CTSA-205ENST00000419493 H3BPC8 53 aa4.3□□□□□ -1.72
CTSA-205ENST00000419493 MT1BP07438 61 aa4.3□□□□□ -1.72
CTSA-205ENST00000419493 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
CTSA-205ENST00000419493 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
CTSA-205ENST00000419493 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
CTSA-205ENST00000419493 H0YAA0 97 aa4.27□□□□□ -1.73
CTSA-205ENST00000419493 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
CTSA-205ENST00000419493 COX7CP15954 63 aa4.23□□□□□ -1.73
CTSA-205ENST00000419493 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
CTSA-205ENST00000419493 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
CTSA-205ENST00000419493 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
CTSA-205ENST00000419493 TMEM258P61165 79 aa4.19□□□□□ -1.74
CTSA-205ENST00000419493 R4GN34 69 aa4.19□□□□□ -1.74
CTSA-205ENST00000419493 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
CTSA-205ENST00000419493 ACYP2P14621 99 aa4.18□□□□□ -1.74
CTSA-205ENST00000419493 C20orf197Q8N268 126 aa4.18□□□□□ -1.74
CTSA-205ENST00000419493 P0C880 135 aa4.16□□□□□ -1.74
CTSA-205ENST00000419493 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
CTSA-205ENST00000419493 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
CTSA-205ENST00000419493 M0QZ58 72 aa4.14□□□□□ -1.75
CTSA-205ENST00000419493 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
CTSA-205ENST00000419493 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
CTSA-205ENST00000419493 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
CTSA-205ENST00000419493 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
CTSA-205ENST00000419493 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
CTSA-205ENST00000419493 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
CTSA-205ENST00000419493 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
CTSA-205ENST00000419493 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CTSA-205ENST00000419493 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
CTSA-205ENST00000419493 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
CTSA-205ENST00000419493 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
CTSA-205ENST00000419493 MT1XP80297 61 aa4.04□□□□□ -1.76
CTSA-205ENST00000419493 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
CTSA-205ENST00000419493 H7BZZ5 65 aa4.03□□□□□ -1.76
CTSA-205ENST00000419493 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
CTSA-205ENST00000419493 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
CTSA-205ENST00000419493 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
CTSA-205ENST00000419493 ATP5EP56381 51 aaPredicted RBP4.02□□□□□ -1.77
CTSA-205ENST00000419493 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
CTSA-205ENST00000419493 KRTAP5-9P26371 169 aa4□□□□□ -1.77
CTSA-205ENST00000419493 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
CTSA-205ENST00000419493 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
CTSA-205ENST00000419493 COA5Q86WW8 74 aa3.93□□□□□ -1.78
CTSA-205ENST00000419493 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
CTSA-205ENST00000419493 SEC61GP60059 68 aa3.92□□□□□ -1.78
CTSA-205ENST00000419493 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
CTSA-205ENST00000419493 SPRR2EP22531 72 aa3.89□□□□□ -1.79
CTSA-205ENST00000419493 SPRR2BP35325 72 aa3.89□□□□□ -1.79
CTSA-205ENST00000419493 SPRR2AP35326 72 aa3.89□□□□□ -1.79
CTSA-205ENST00000419493 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
CTSA-205ENST00000419493 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
CTSA-205ENST00000419493 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
CTSA-205ENST00000419493 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
CTSA-205ENST00000419493 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
CTSA-205ENST00000419493 V9GYY9 64 aa3.85□□□□□ -1.79
CTSA-205ENST00000419493 A0A0D9SG42 100 aa3.84□□□□□ -1.79
CTSA-205ENST00000419493 Q1T7F1 81 aa3.84□□□□□ -1.79
CTSA-205ENST00000419493 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
CTSA-205ENST00000419493 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
CTSA-205ENST00000419493 KMT2DO14686 5537 aa3.81□□□□□ -1.8
CTSA-205ENST00000419493 A0A1B0GU33 70 aa3.81□□□□□ -1.8
CTSA-205ENST00000419493 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
CTSA-205ENST00000419493 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
CTSA-205ENST00000419493 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
CTSA-205ENST00000419493 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
CTSA-205ENST00000419493 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
CTSA-205ENST00000419493 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
CTSA-205ENST00000419493 A0A1B0GU69 56 aa3.77□□□□□ -1.81
CTSA-205ENST00000419493 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
CTSA-205ENST00000419493 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
CTSA-205ENST00000419493 SPRR2DP22532 72 aa3.76□□□□□ -1.81
CTSA-205ENST00000419493 NEBP20929 6669 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms