RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OCR1Q9BZK8 76 aa9.24□□□□□ -0.93
GTF3A-202ENST00000419181 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
GTF3A-202ENST00000419181 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
GTF3A-202ENST00000419181 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
GTF3A-202ENST00000419181 SPRR2GQ9BYE4 73 aa9.17□□□□□ -0.94
GTF3A-202ENST00000419181 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
GTF3A-202ENST00000419181 MP68P56378 58 aa9.16□□□□□ -0.94
GTF3A-202ENST00000419181 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
GTF3A-202ENST00000419181 A8MUN3 132 aa9.14□□□□□ -0.95
GTF3A-202ENST00000419181 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
GTF3A-202ENST00000419181 NDUFC1O43677 76 aa9.1□□□□□ -0.95
GTF3A-202ENST00000419181 KRTAP19-8Q3LI54 63 aa9.1□□□□□ -0.95
GTF3A-202ENST00000419181 MT1BP07438 61 aa9.09□□□□□ -0.95
GTF3A-202ENST00000419181 Q5VV11 94 aa9.07□□□□□ -0.96
GTF3A-202ENST00000419181 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
GTF3A-202ENST00000419181 H3BPC8 53 aa9.05□□□□□ -0.96
GTF3A-202ENST00000419181 H0YAA0 97 aa9.04□□□□□ -0.96
GTF3A-202ENST00000419181 SCGB1A1P11684 91 aa9.04□□□□□ -0.96
GTF3A-202ENST00000419181 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
GTF3A-202ENST00000419181 A6NN06 94 aa8.93□□□□□ -0.98
GTF3A-202ENST00000419181 K7ERU9 68 aa8.93□□□□□ -0.98
GTF3A-202ENST00000419181 MT-ATP8P03928 68 aa8.93□□□□□ -0.98
GTF3A-202ENST00000419181 DMAC1Q96GE9 116 aa8.92□□□□□ -0.98
GTF3A-202ENST00000419181 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
GTF3A-202ENST00000419181 KRTAP6-3Q3LI67 103 aa8.9□□□□□ -0.98
GTF3A-202ENST00000419181 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
GTF3A-202ENST00000419181 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
GTF3A-202ENST00000419181 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
GTF3A-202ENST00000419181 P0C880 135 aa8.73□□□□□ -1.01
GTF3A-202ENST00000419181 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
GTF3A-202ENST00000419181 ACYP2P14621 99 aa8.69□□□□□ -1.02
GTF3A-202ENST00000419181 R4GN34 69 aa8.68□□□□□ -1.02
GTF3A-202ENST00000419181 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
GTF3A-202ENST00000419181 M0QZ58 72 aa8.61□□□□□ -1.03
GTF3A-202ENST00000419181 NEBP20929 6669 aa8.58□□□□□ -1.04
GTF3A-202ENST00000419181 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
GTF3A-202ENST00000419181 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
GTF3A-202ENST00000419181 MT1XP80297 61 aa8.55□□□□□ -1.04
GTF3A-202ENST00000419181 SERP2Q8N6R1 65 aa8.55□□□□□ -1.04
GTF3A-202ENST00000419181 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
GTF3A-202ENST00000419181 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.05
GTF3A-202ENST00000419181 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
GTF3A-202ENST00000419181 MUC12Q9UKN1 5478 aa8.48□□□□□ -1.05
GTF3A-202ENST00000419181 KRTAP5-9P26371 169 aa8.47□□□□□ -1.05
GTF3A-202ENST00000419181 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
GTF3A-202ENST00000419181 KMT2DO14686 5537 aa8.37□□□□□ -1.07
GTF3A-202ENST00000419181 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
GTF3A-202ENST00000419181 COX7CP15954 63 aa8.3□□□□□ -1.08
GTF3A-202ENST00000419181 KRTAP20-1Q3LI63 56 aa8.3□□□□□ -1.08
GTF3A-202ENST00000419181 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
GTF3A-202ENST00000419181 COA5Q86WW8 74 aa8.27□□□□□ -1.09
GTF3A-202ENST00000419181 SPRR2FQ96RM1 72 aa8.24□□□□□ -1.09
GTF3A-202ENST00000419181 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
GTF3A-202ENST00000419181 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.1
GTF3A-202ENST00000419181 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
GTF3A-202ENST00000419181 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
GTF3A-202ENST00000419181 H7BZZ5 65 aa8.18□□□□□ -1.1
GTF3A-202ENST00000419181 KRTAP10-7P60409 375 aaPredicted RBP8.15□□□□□ -1.1
GTF3A-202ENST00000419181 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
GTF3A-202ENST00000419181 SPRR2EP22531 72 aa8.14□□□□□ -1.11
GTF3A-202ENST00000419181 SPRR2BP35325 72 aa8.14□□□□□ -1.11
GTF3A-202ENST00000419181 SPRR2AP35326 72 aa8.14□□□□□ -1.11
GTF3A-202ENST00000419181 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
GTF3A-202ENST00000419181 SEC61GP60059 68 aa8.07□□□□□ -1.12
GTF3A-202ENST00000419181 KRTAP2-3P0C7H8 128 aa8.05□□□□□ -1.12
GTF3A-202ENST00000419181 KRTAP2-4Q9BYR9 128 aa8.05□□□□□ -1.12
GTF3A-202ENST00000419181 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
GTF3A-202ENST00000419181 ANAPC13Q9BS18 74 aa8.03□□□□□ -1.12
GTF3A-202ENST00000419181 LCE1AQ5T7P2 110 aa7.99□□□□□ -1.13
GTF3A-202ENST00000419181 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
GTF3A-202ENST00000419181 A0A1B0GU33 70 aa7.94□□□□□ -1.14
GTF3A-202ENST00000419181 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
GTF3A-202ENST00000419181 A0A0D9SG42 100 aa7.93□□□□□ -1.14
GTF3A-202ENST00000419181 CCDC179H3BU77 68 aa7.89□□□□□ -1.15
GTF3A-202ENST00000419181 SPRR2DP22532 72 aa7.87□□□□□ -1.15
GTF3A-202ENST00000419181 A0A1B0GU69 56 aa7.83□□□□□ -1.16
GTF3A-202ENST00000419181 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
GTF3A-202ENST00000419181 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
GTF3A-202ENST00000419181 KRTAP2-2Q9BYT5 123 aa7.79□□□□□ -1.16
GTF3A-202ENST00000419181 KRTAP2-1Q9BYU5 128 aa7.79□□□□□ -1.16
GTF3A-202ENST00000419181 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
GTF3A-202ENST00000419181 ATP5EP56381 51 aaPredicted RBP7.77□□□□□ -1.17
GTF3A-202ENST00000419181 KRTAP4-12Q9BQ66 201 aa7.73□□□□□ -1.17
GTF3A-202ENST00000419181 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
GTF3A-202ENST00000419181 KRTAP9-9Q9BYP9 154 aa7.69□□□□□ -1.18
GTF3A-202ENST00000419181 KRTAP9-4Q9BYQ2 154 aa7.69□□□□□ -1.18
GTF3A-202ENST00000419181 A8MU10 97 aa7.66□□□□□ -1.18
GTF3A-202ENST00000419181 KRTAP19-7Q3SYF9 63 aa7.65□□□□□ -1.18
GTF3A-202ENST00000419181 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
GTF3A-202ENST00000419181 TMEM258P61165 79 aa7.59□□□□□ -1.19
GTF3A-202ENST00000419181 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
GTF3A-202ENST00000419181 MT1EP04732 61 aa7.57□□□□□ -1.2
GTF3A-202ENST00000419181 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
GTF3A-202ENST00000419181 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
GTF3A-202ENST00000419181 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.22
GTF3A-202ENST00000419181 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
GTF3A-202ENST00000419181 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
GTF3A-202ENST00000419181 TNP1P09430 55 aa7.39□□□□□ -1.23
GTF3A-202ENST00000419181 UQCR11O14957 56 aa7.38□□□□□ -1.23
GTF3A-202ENST00000419181 DSTQ03001 7570 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms