RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RPL37P61927 97 aaKnown RBP4.26□□□□□ -1.73
HMGXB4-202ENST00000418170 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
HMGXB4-202ENST00000418170 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
HMGXB4-202ENST00000418170 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
HMGXB4-202ENST00000418170 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
HMGXB4-202ENST00000418170 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-202ENST00000418170 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-202ENST00000418170 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
HMGXB4-202ENST00000418170 C9orf92A6NGG3 77 aa4.2□□□□□ -1.74
HMGXB4-202ENST00000418170 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
HMGXB4-202ENST00000418170 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
HMGXB4-202ENST00000418170 RYR1P21817 5038 aa4.19□□□□□ -1.74
HMGXB4-202ENST00000418170 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
HMGXB4-202ENST00000418170 A0A0D9SG42 100 aa4.18□□□□□ -1.74
HMGXB4-202ENST00000418170 KRTAP3-2Q9BYR7 98 aa4.15□□□□□ -1.75
HMGXB4-202ENST00000418170 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
HMGXB4-202ENST00000418170 MYCBP2O75592 4640 aa4.14□□□□□ -1.75
HMGXB4-202ENST00000418170 KRTAP3-3Q9BYR6 98 aa4.14□□□□□ -1.75
HMGXB4-202ENST00000418170 DMBT1Q9UGM3 2413 aaPredicted RBP4.13□□□□□ -1.75
HMGXB4-202ENST00000418170 S4R3F8 94 aa4.12□□□□□ -1.75
HMGXB4-202ENST00000418170 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
HMGXB4-202ENST00000418170 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
HMGXB4-202ENST00000418170 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
HMGXB4-202ENST00000418170 A0A1B0GVY2 172 aa4.1□□□□□ -1.75
HMGXB4-202ENST00000418170 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
HMGXB4-202ENST00000418170 LPAP08519 4548 aa4.07□□□□□ -1.76
HMGXB4-202ENST00000418170 XP32Q5T750 250 aa4.06□□□□□ -1.76
HMGXB4-202ENST00000418170 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
HMGXB4-202ENST00000418170 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
HMGXB4-202ENST00000418170 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
HMGXB4-202ENST00000418170 SMR3BP02814 79 aaPredicted RBP3.95□□□□□ -1.78
HMGXB4-202ENST00000418170 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
HMGXB4-202ENST00000418170 M0QZ58 72 aa3.94□□□□□ -1.78
HMGXB4-202ENST00000418170 HERC2O95714 4834 aa3.92□□□□□ -1.78
HMGXB4-202ENST00000418170 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
HMGXB4-202ENST00000418170 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
HMGXB4-202ENST00000418170 LRP2P98164 4655 aa3.9□□□□□ -1.79
HMGXB4-202ENST00000418170 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
HMGXB4-202ENST00000418170 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
HMGXB4-202ENST00000418170 HERC1Q15751 4861 aa3.81□□□□□ -1.8
HMGXB4-202ENST00000418170 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
HMGXB4-202ENST00000418170 MT1HL1P0DM35 61 aa3.78□□□□□ -1.81
HMGXB4-202ENST00000418170 R4GN34 69 aa3.77□□□□□ -1.81
HMGXB4-202ENST00000418170 MUC2Q02817 5179 aa3.77□□□□□ -1.81
HMGXB4-202ENST00000418170 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
HMGXB4-202ENST00000418170 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
HMGXB4-202ENST00000418170 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
HMGXB4-202ENST00000418170 Q5VSD8 79 aa3.68□□□□□ -1.82
HMGXB4-202ENST00000418170 LORP23490 312 aaPredicted RBP3.67□□□□□ -1.82
HMGXB4-202ENST00000418170 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
HMGXB4-202ENST00000418170 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
HMGXB4-202ENST00000418170 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
HMGXB4-202ENST00000418170 LCE2DQ5TA82 110 aaPredicted RBP3.58□□□□□ -1.84
HMGXB4-202ENST00000418170 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
HMGXB4-202ENST00000418170 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
HMGXB4-202ENST00000418170 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
HMGXB4-202ENST00000418170 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
HMGXB4-202ENST00000418170 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
HMGXB4-202ENST00000418170 KRTAP4-1Q9BYQ7 146 aa3.53□□□□□ -1.84
HMGXB4-202ENST00000418170 TNP1P09430 55 aa3.52□□□□□ -1.85
HMGXB4-202ENST00000418170 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
HMGXB4-202ENST00000418170 INE1O15225 51 aa3.41□□□□□ -1.86
HMGXB4-202ENST00000418170 LCE2CQ5TA81 110 aa3.36□□□□□ -1.87
HMGXB4-202ENST00000418170 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
HMGXB4-202ENST00000418170 J3QL48 77 aa3.27□□□□□ -1.89
HMGXB4-202ENST00000418170 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
HMGXB4-202ENST00000418170 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
HMGXB4-202ENST00000418170 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
HMGXB4-202ENST00000418170 MT1HP80294 61 aa3.15□□□□□ -1.9
HMGXB4-202ENST00000418170 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
HMGXB4-202ENST00000418170 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
HMGXB4-202ENST00000418170 KRTAP9-8Q9BYQ0 159 aa3.12□□□□□ -1.91
HMGXB4-202ENST00000418170 USH2AO75445 5202 aa3.09□□□□□ -1.91
HMGXB4-202ENST00000418170 MT1FP04733 61 aa3.06□□□□□ -1.92
HMGXB4-202ENST00000418170 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
HMGXB4-202ENST00000418170 LCE2BO14633 110 aa3.05□□□□□ -1.92
HMGXB4-202ENST00000418170 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
HMGXB4-202ENST00000418170 MT2AP02795 61 aa3.04□□□□□ -1.92
HMGXB4-202ENST00000418170 MT1XP80297 61 aa3.04□□□□□ -1.92
HMGXB4-202ENST00000418170 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
HMGXB4-202ENST00000418170 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
HMGXB4-202ENST00000418170 M0R2T5 61 aa3.01□□□□□ -1.93
HMGXB4-202ENST00000418170 MT1BP07438 61 aa2.99□□□□□ -1.93
HMGXB4-202ENST00000418170 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
HMGXB4-202ENST00000418170 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
HMGXB4-202ENST00000418170 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
HMGXB4-202ENST00000418170 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
HMGXB4-202ENST00000418170 KMT2DO14686 5537 aa2.94□□□□□ -1.94
HMGXB4-202ENST00000418170 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.94
HMGXB4-202ENST00000418170 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.94
HMGXB4-202ENST00000418170 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.94
HMGXB4-202ENST00000418170 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
HMGXB4-202ENST00000418170 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
HMGXB4-202ENST00000418170 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
HMGXB4-202ENST00000418170 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
HMGXB4-202ENST00000418170 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
HMGXB4-202ENST00000418170 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
HMGXB4-202ENST00000418170 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
HMGXB4-202ENST00000418170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
HMGXB4-202ENST00000418170 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms