RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 KRTAP5-9P26371 169 aa9.48□□□□□ -0.89
ACTB-203ENST00000417101 ETDBQ3ZM63 59 aa9.48□□□□□ -0.89
ACTB-203ENST00000417101 GTF2H5Q6ZYL4 71 aa9.48□□□□□ -0.89
ACTB-203ENST00000417101 LOC101927531A0A1B0GV80 90 aa9.47□□□□□ -0.89
ACTB-203ENST00000417101 F8W1H4 67 aa9.45□□□□□ -0.9
ACTB-203ENST00000417101 KRTAP20-1Q3LI63 56 aa9.45□□□□□ -0.9
ACTB-203ENST00000417101 NDUFC1O43677 76 aa9.38□□□□□ -0.91
ACTB-203ENST00000417101 H0YAA0 97 aa9.34□□□□□ -0.91
ACTB-203ENST00000417101 H0Y9P7 68 aa9.32□□□□□ -0.92
ACTB-203ENST00000417101 UQCRQO14949 82 aa9.31□□□□□ -0.92
ACTB-203ENST00000417101 ATOX1O00244 68 aa9.29□□□□□ -0.92
ACTB-203ENST00000417101 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
ACTB-203ENST00000417101 ACYP1P07311 99 aa9.28□□□□□ -0.92
ACTB-203ENST00000417101 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
ACTB-203ENST00000417101 ATP5EP2Q5VTU8 51 aa9.25□□□□□ -0.93
ACTB-203ENST00000417101 A8MUN3 132 aa9.24□□□□□ -0.93
ACTB-203ENST00000417101 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
ACTB-203ENST00000417101 FAM240AA0A1B0GVK7 77 aa9.19□□□□□ -0.94
ACTB-203ENST00000417101 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
ACTB-203ENST00000417101 MT1XP80297 61 aa9.17□□□□□ -0.94
ACTB-203ENST00000417101 SPRR2FQ96RM1 72 aa9.17□□□□□ -0.94
ACTB-203ENST00000417101 LINC00208Q96KT6 92 aa9.15□□□□□ -0.94
ACTB-203ENST00000417101 KRTAP2-3P0C7H8 128 aa9.13□□□□□ -0.95
ACTB-203ENST00000417101 KRTAP2-4Q9BYR9 128 aa9.13□□□□□ -0.95
ACTB-203ENST00000417101 PLAC4Q8WY50 150 aa9.12□□□□□ -0.95
ACTB-203ENST00000417101 SPRR2EP22531 72 aa9.09□□□□□ -0.95
ACTB-203ENST00000417101 SPRR2BP35325 72 aa9.09□□□□□ -0.95
ACTB-203ENST00000417101 SPRR2AP35326 72 aa9.09□□□□□ -0.95
ACTB-203ENST00000417101 R4GN34 69 aa9.05□□□□□ -0.96
ACTB-203ENST00000417101 MP68P56378 58 aa9.04□□□□□ -0.96
ACTB-203ENST00000417101 LINC00643Q86TS7 51 aa9.04□□□□□ -0.96
ACTB-203ENST00000417101 KRTAP8-1Q8IUC2 63 aa9.04□□□□□ -0.96
ACTB-203ENST00000417101 P0C880 135 aa9.03□□□□□ -0.96
ACTB-203ENST00000417101 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
ACTB-203ENST00000417101 C20orf197Q8N268 126 aa8.99□□□□□ -0.97
ACTB-203ENST00000417101 M0QZ58 72 aa8.98□□□□□ -0.97
ACTB-203ENST00000417101 KRTAP12-2P59991 146 aa8.97□□□□□ -0.97
ACTB-203ENST00000417101 LCE1AQ5T7P2 110 aa8.93□□□□□ -0.98
ACTB-203ENST00000417101 LINC01554Q52M75 96 aa8.89□□□□□ -0.99
ACTB-203ENST00000417101 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
ACTB-203ENST00000417101 DMAC1Q96GE9 116 aa8.88□□□□□ -0.99
ACTB-203ENST00000417101 KRTAP4-8A0A0G2JLE6 195 aa8.87□□□□□ -0.99
ACTB-203ENST00000417101 KRTAP4-8Q9BYQ9 185 aa8.87□□□□□ -0.99
ACTB-203ENST00000417101 H3BPC8 53 aa8.85□□□□□ -0.99
ACTB-203ENST00000417101 KRTAP2-2Q9BYT5 123 aa8.82□□□□□ -1
ACTB-203ENST00000417101 KRTAP2-1Q9BYU5 128 aa8.82□□□□□ -1
ACTB-203ENST00000417101 SPRR2DP22532 72 aa8.79□□□□□ -1
ACTB-203ENST00000417101 KRTAP10-7P60409 375 aaPredicted RBP8.75□□□□□ -1.01
ACTB-203ENST00000417101 SCGB1A1P11684 91 aa8.73□□□□□ -1.01
ACTB-203ENST00000417101 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
ACTB-203ENST00000417101 TRAV7A0A075B6U4 112 aa8.68□□□□□ -1.02
ACTB-203ENST00000417101 A0A1B0GV90 55 aa8.65□□□□□ -1.02
ACTB-203ENST00000417101 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
ACTB-203ENST00000417101 ACYP2P14621 99 aa8.61□□□□□ -1.03
ACTB-203ENST00000417101 J3QR89 54 aa8.59□□□□□ -1.03
ACTB-203ENST00000417101 LCE3BQ5TA77 95 aa8.57□□□□□ -1.04
ACTB-203ENST00000417101 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
ACTB-203ENST00000417101 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
ACTB-203ENST00000417101 SMIM20Q8N5G0 67 aa8.39□□□□□ -1.07
ACTB-203ENST00000417101 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
ACTB-203ENST00000417101 SNURFQ9Y675 71 aa8.31□□□□□ -1.08
ACTB-203ENST00000417101 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
ACTB-203ENST00000417101 DSTQ03001 7570 aaKnown RBP8.24□□□□□ -1.09
ACTB-203ENST00000417101 GPR98Q8WXG9 6306 aa8.21□□□□□ -1.09
ACTB-203ENST00000417101 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
ACTB-203ENST00000417101 KRTAP19-7Q3SYF9 63 aa8.19□□□□□ -1.1
ACTB-203ENST00000417101 LCE5AQ5TCM9 118 aa8.17□□□□□ -1.1
ACTB-203ENST00000417101 MT1EP04732 61 aa8.14□□□□□ -1.11
ACTB-203ENST00000417101 K7ERU9 68 aa8.13□□□□□ -1.11
ACTB-203ENST00000417101 KRTAP19-3Q7Z4W3 81 aa8.12□□□□□ -1.11
ACTB-203ENST00000417101 A0A0D9SG42 100 aa8.06□□□□□ -1.12
ACTB-203ENST00000417101 KRTAP4-9Q9BYQ8 210 aa8.06□□□□□ -1.12
ACTB-203ENST00000417101 COA5Q86WW8 74 aa8.02□□□□□ -1.13
ACTB-203ENST00000417101 SERP2Q8N6R1 65 aa8.02□□□□□ -1.13
ACTB-203ENST00000417101 SEC61GP60059 68 aa7.98□□□□□ -1.13
ACTB-203ENST00000417101 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
ACTB-203ENST00000417101 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
ACTB-203ENST00000417101 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
ACTB-203ENST00000417101 CYSTM1Q9H1C7 97 aa7.95□□□□□ -1.14
ACTB-203ENST00000417101 KRTAP19-5Q3LI72 72 aa7.93□□□□□ -1.14
ACTB-203ENST00000417101 MT1GP13640 62 aa7.89□□□□□ -1.15
ACTB-203ENST00000417101 A0A1B0GU33 70 aa7.88□□□□□ -1.15
ACTB-203ENST00000417101 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
ACTB-203ENST00000417101 LCE1DQ5T752 114 aa7.83□□□□□ -1.16
ACTB-203ENST00000417101 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
ACTB-203ENST00000417101 HMCN1Q96RW7 5635 aa7.79□□□□□ -1.16
ACTB-203ENST00000417101 MT1MQ8N339 61 aa7.77□□□□□ -1.17
ACTB-203ENST00000417101 MT4P47944 62 aa7.73□□□□□ -1.17
ACTB-203ENST00000417101 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
ACTB-203ENST00000417101 MT1LQ93083 61 aa7.73□□□□□ -1.17
ACTB-203ENST00000417101 COX7CP15954 63 aa7.68□□□□□ -1.18
ACTB-203ENST00000417101 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
ACTB-203ENST00000417101 H7BZZ5 65 aa7.65□□□□□ -1.18
ACTB-203ENST00000417101 AHNAK2Q8IVF2 5795 aa7.64□□□□□ -1.19
ACTB-203ENST00000417101 A8MU10 97 aa7.62□□□□□ -1.19
ACTB-203ENST00000417101 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
ACTB-203ENST00000417101 KRTAP4-3Q9BYR4 195 aa7.62□□□□□ -1.19
ACTB-203ENST00000417101 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
ACTB-203ENST00000417101 A0A1B0GU69 56 aa7.61□□□□□ -1.19
ACTB-203ENST00000417101 TNP1P09430 55 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms