RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
LMBR1-203ENST00000414218 MACF1Q9UPN3 7388 aaKnown RBP9.58□□□□□ -0.88
LMBR1-203ENST00000414218 C1orf64Q8NEQ6 169 aa9.58□□□□□ -0.88
LMBR1-203ENST00000414218 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
LMBR1-203ENST00000414218 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
LMBR1-203ENST00000414218 KRTAP3-1Q9BYR8 98 aa9.48□□□□□ -0.89
LMBR1-203ENST00000414218 SYNE2Q8WXH0 6885 aaKnown RBP9.47□□□□□ -0.89
LMBR1-203ENST00000414218 S4R3F8 94 aa9.43□□□□□ -0.9
LMBR1-203ENST00000414218 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
LMBR1-203ENST00000414218 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
LMBR1-203ENST00000414218 A8MUN3 132 aa9.37□□□□□ -0.91
LMBR1-203ENST00000414218 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
LMBR1-203ENST00000414218 LCA10Q71F78 164 aa9.36□□□□□ -0.91
LMBR1-203ENST00000414218 KRTAP6-3Q3LI67 103 aa9.35□□□□□ -0.91
LMBR1-203ENST00000414218 MT1BP07438 61 aa9.29□□□□□ -0.92
LMBR1-203ENST00000414218 Q5VV11 94 aa9.27□□□□□ -0.93
LMBR1-203ENST00000414218 SPRR2GQ9BYE4 73 aa9.26□□□□□ -0.93
LMBR1-203ENST00000414218 A6NN06 94 aa9.24□□□□□ -0.93
LMBR1-203ENST00000414218 COX7CP15954 63 aa9.24□□□□□ -0.93
LMBR1-203ENST00000414218 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
LMBR1-203ENST00000414218 C20orf197Q8N268 126 aa9.23□□□□□ -0.93
LMBR1-203ENST00000414218 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
LMBR1-203ENST00000414218 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
LMBR1-203ENST00000414218 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
LMBR1-203ENST00000414218 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
LMBR1-203ENST00000414218 NDUFC1O43677 76 aa9.14□□□□□ -0.95
LMBR1-203ENST00000414218 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
LMBR1-203ENST00000414218 ACYP2P14621 99 aa9.11□□□□□ -0.95
LMBR1-203ENST00000414218 KRTAP10-5P60370 271 aa9.1□□□□□ -0.95
LMBR1-203ENST00000414218 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
LMBR1-203ENST00000414218 H0YAA0 97 aa9.01□□□□□ -0.97
LMBR1-203ENST00000414218 H7BZZ5 65 aa8.99□□□□□ -0.97
LMBR1-203ENST00000414218 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
LMBR1-203ENST00000414218 NEBP20929 6669 aa8.92□□□□□ -0.98
LMBR1-203ENST00000414218 SPTSSBQ8NFR3 76 aa8.92□□□□□ -0.98
LMBR1-203ENST00000414218 CCDC179H3BU77 68 aa8.9□□□□□ -0.98
LMBR1-203ENST00000414218 CHKB-CPT1BH3BT56 60 aa8.86□□□□□ -0.99
LMBR1-203ENST00000414218 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
LMBR1-203ENST00000414218 PCP4P48539 62 aa8.85□□□□□ -0.99
LMBR1-203ENST00000414218 MUC12Q9UKN1 5478 aa8.84□□□□□ -0.99
LMBR1-203ENST00000414218 KRTAP5-9P26371 169 aa8.84□□□□□ -0.99
LMBR1-203ENST00000414218 COA5Q86WW8 74 aa8.78□□□□□ -1
LMBR1-203ENST00000414218 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
LMBR1-203ENST00000414218 KRTAP20-1Q3LI63 56 aa8.74□□□□□ -1.01
LMBR1-203ENST00000414218 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
LMBR1-203ENST00000414218 KMT2DO14686 5537 aa8.68□□□□□ -1.02
LMBR1-203ENST00000414218 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
LMBR1-203ENST00000414218 TMEM258P61165 79 aa8.67□□□□□ -1.02
LMBR1-203ENST00000414218 MT1XP80297 61 aa8.67□□□□□ -1.02
LMBR1-203ENST00000414218 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
LMBR1-203ENST00000414218 P0C880 135 aa8.65□□□□□ -1.02
LMBR1-203ENST00000414218 R4GN34 69 aa8.63□□□□□ -1.03
LMBR1-203ENST00000414218 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
LMBR1-203ENST00000414218 SPRR2FQ96RM1 72 aa8.57□□□□□ -1.04
LMBR1-203ENST00000414218 M0QZ58 72 aa8.56□□□□□ -1.04
LMBR1-203ENST00000414218 SPRR2EP22531 72 aa8.49□□□□□ -1.05
LMBR1-203ENST00000414218 SPRR2BP35325 72 aa8.49□□□□□ -1.05
LMBR1-203ENST00000414218 SPRR2AP35326 72 aa8.49□□□□□ -1.05
LMBR1-203ENST00000414218 SEC61GP60059 68 aa8.49□□□□□ -1.05
LMBR1-203ENST00000414218 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
LMBR1-203ENST00000414218 KRTAP2-3P0C7H8 128 aa8.47□□□□□ -1.05
LMBR1-203ENST00000414218 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
LMBR1-203ENST00000414218 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
LMBR1-203ENST00000414218 KRTAP2-4Q9BYR9 128 aa8.47□□□□□ -1.05
LMBR1-203ENST00000414218 SERP1Q9Y6X1 66 aa8.46□□□□□ -1.06
LMBR1-203ENST00000414218 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
LMBR1-203ENST00000414218 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
LMBR1-203ENST00000414218 LCE1AQ5T7P2 110 aa8.35□□□□□ -1.07
LMBR1-203ENST00000414218 A0A1B0GU69 56 aa8.33□□□□□ -1.08
LMBR1-203ENST00000414218 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
LMBR1-203ENST00000414218 A0A1B0GU33 70 aa8.29□□□□□ -1.08
LMBR1-203ENST00000414218 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
LMBR1-203ENST00000414218 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
LMBR1-203ENST00000414218 PRR15LQ9BU68 103 aa8.26□□□□□ -1.09
LMBR1-203ENST00000414218 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
LMBR1-203ENST00000414218 SPRR2DP22532 72 aa8.2□□□□□ -1.1
LMBR1-203ENST00000414218 KRTAP2-2Q9BYT5 123 aa8.19□□□□□ -1.1
LMBR1-203ENST00000414218 KRTAP2-1Q9BYU5 128 aa8.19□□□□□ -1.1
LMBR1-203ENST00000414218 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
LMBR1-203ENST00000414218 V9GYY9 64 aa8.15□□□□□ -1.1
LMBR1-203ENST00000414218 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
LMBR1-203ENST00000414218 Q1T7F1 81 aa8.11□□□□□ -1.11
LMBR1-203ENST00000414218 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
LMBR1-203ENST00000414218 A0A0D9SG42 100 aa8.01□□□□□ -1.13
LMBR1-203ENST00000414218 UQCR11O14957 56 aa8.01□□□□□ -1.13
LMBR1-203ENST00000414218 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
LMBR1-203ENST00000414218 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
LMBR1-203ENST00000414218 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
LMBR1-203ENST00000414218 A8MU10 97 aa7.91□□□□□ -1.14
LMBR1-203ENST00000414218 PSPHP1O15172 72 aa7.89□□□□□ -1.15
LMBR1-203ENST00000414218 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
LMBR1-203ENST00000414218 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
LMBR1-203ENST00000414218 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
LMBR1-203ENST00000414218 MT1EP04732 61 aa7.69□□□□□ -1.18
LMBR1-203ENST00000414218 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
LMBR1-203ENST00000414218 A6NED7 52 aa7.68□□□□□ -1.18
LMBR1-203ENST00000414218 KRTAP19-3Q7Z4W3 81 aa7.65□□□□□ -1.18
LMBR1-203ENST00000414218 K7ERS5 55 aa7.62□□□□□ -1.19
LMBR1-203ENST00000414218 DSTQ03001 7570 aaKnown RBP7.56□□□□□ -1.2
LMBR1-203ENST00000414218 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms