RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
CIRBP-202ENST00000413636 KRTAP19-2Q3LHN2 52 aa9.41□□□□□ -0.9
CIRBP-202ENST00000413636 LINC01558Q9Y6Z2 57 aa9.39□□□□□ -0.91
CIRBP-202ENST00000413636 RBM12B-AS1Q9P1G2 102 aa9.38□□□□□ -0.91
CIRBP-202ENST00000413636 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
CIRBP-202ENST00000413636 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
CIRBP-202ENST00000413636 PSPHP1O15172 72 aa9.29□□□□□ -0.92
CIRBP-202ENST00000413636 PRR15LQ9BU68 103 aa9.29□□□□□ -0.92
CIRBP-202ENST00000413636 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.92
CIRBP-202ENST00000413636 Q5VV11 94 aa9.22□□□□□ -0.93
CIRBP-202ENST00000413636 S4R3F8 94 aa9.22□□□□□ -0.93
CIRBP-202ENST00000413636 A0A1B0GU69 56 aa9.21□□□□□ -0.93
CIRBP-202ENST00000413636 MT1HP80294 61 aa9.2□□□□□ -0.94
CIRBP-202ENST00000413636 SEC61GP60059 68 aa9.18□□□□□ -0.94
CIRBP-202ENST00000413636 LCA10Q71F78 164 aa9.17□□□□□ -0.94
CIRBP-202ENST00000413636 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
CIRBP-202ENST00000413636 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
CIRBP-202ENST00000413636 M0R2T5 61 aa9.09□□□□□ -0.95
CIRBP-202ENST00000413636 FLGP20930 4061 aaPredicted RBP9.09□□□□□ -0.95
CIRBP-202ENST00000413636 A6NED7 52 aa9.05□□□□□ -0.96
CIRBP-202ENST00000413636 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
CIRBP-202ENST00000413636 BRK1Q8WUW1 75 aa9.02□□□□□ -0.97
CIRBP-202ENST00000413636 UQCR11O14957 56 aa8.98□□□□□ -0.97
CIRBP-202ENST00000413636 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
CIRBP-202ENST00000413636 KRTAP10-6P60371 365 aaPredicted RBP8.93□□□□□ -0.98
CIRBP-202ENST00000413636 CDC42SE1Q9NRR8 79 aa8.93□□□□□ -0.98
CIRBP-202ENST00000413636 A0A1B0GU33 70 aa8.9□□□□□ -0.99
CIRBP-202ENST00000413636 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
CIRBP-202ENST00000413636 H0YAA0 97 aa8.87□□□□□ -0.99
CIRBP-202ENST00000413636 MIR22HGQ0VDD5 57 aa8.86□□□□□ -0.99
CIRBP-202ENST00000413636 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
CIRBP-202ENST00000413636 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
CIRBP-202ENST00000413636 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
CIRBP-202ENST00000413636 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
CIRBP-202ENST00000413636 A8MU10 97 aa8.75□□□□□ -1.01
CIRBP-202ENST00000413636 P0C880 135 aa8.73□□□□□ -1.01
CIRBP-202ENST00000413636 MT2AP02795 61 aa8.72□□□□□ -1.01
CIRBP-202ENST00000413636 MT1FP04733 61 aa8.66□□□□□ -1.02
CIRBP-202ENST00000413636 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
CIRBP-202ENST00000413636 M0QZ58 72 aa8.63□□□□□ -1.03
CIRBP-202ENST00000413636 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
CIRBP-202ENST00000413636 PMAIP1Q13794 54 aa8.56□□□□□ -1.04
CIRBP-202ENST00000413636 R4GN34 69 aa8.52□□□□□ -1.05
CIRBP-202ENST00000413636 K7ERS5 55 aa8.51□□□□□ -1.05
CIRBP-202ENST00000413636 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
CIRBP-202ENST00000413636 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
CIRBP-202ENST00000413636 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
CIRBP-202ENST00000413636 A0A0D9SG42 100 aa8.46□□□□□ -1.06
CIRBP-202ENST00000413636 A6NN06 94 aa8.46□□□□□ -1.06
CIRBP-202ENST00000413636 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
CIRBP-202ENST00000413636 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
CIRBP-202ENST00000413636 LCE2BO14633 110 aa8.33□□□□□ -1.08
CIRBP-202ENST00000413636 LINC01554Q52M75 96 aa8.31□□□□□ -1.08
CIRBP-202ENST00000413636 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
CIRBP-202ENST00000413636 SPRR2GQ9BYE4 73 aa8.3□□□□□ -1.08
CIRBP-202ENST00000413636 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
CIRBP-202ENST00000413636 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
CIRBP-202ENST00000413636 KTN1-AS1Q86SY8 53 aa8.24□□□□□ -1.09
CIRBP-202ENST00000413636 USH2AO75445 5202 aa8.16□□□□□ -1.1
CIRBP-202ENST00000413636 KRTAP19-8Q3LI54 63 aa8.16□□□□□ -1.1
CIRBP-202ENST00000413636 ROMO1P60602 79 aa8.11□□□□□ -1.11
CIRBP-202ENST00000413636 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
CIRBP-202ENST00000413636 MT1BP07438 61 aa8.1□□□□□ -1.11
CIRBP-202ENST00000413636 CRCT1Q9UGL9 99 aa8.04□□□□□ -1.12
CIRBP-202ENST00000413636 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
CIRBP-202ENST00000413636 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
CIRBP-202ENST00000413636 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
CIRBP-202ENST00000413636 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
CIRBP-202ENST00000413636 KRTAP19-6Q3LI70 58 aa7.92□□□□□ -1.14
CIRBP-202ENST00000413636 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
CIRBP-202ENST00000413636 C10orf95Q9H7T3 257 aa7.84□□□□□ -1.15
CIRBP-202ENST00000413636 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
CIRBP-202ENST00000413636 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
CIRBP-202ENST00000413636 FCGBPQ9Y6R7 5405 aaPredicted RBP7.73□□□□□ -1.17
CIRBP-202ENST00000413636 MT1XP80297 61 aa7.73□□□□□ -1.17
CIRBP-202ENST00000413636 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
CIRBP-202ENST00000413636 TNP1P09430 55 aa7.65□□□□□ -1.18
CIRBP-202ENST00000413636 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
CIRBP-202ENST00000413636 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
CIRBP-202ENST00000413636 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.21
CIRBP-202ENST00000413636 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
CIRBP-202ENST00000413636 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
CIRBP-202ENST00000413636 KRTAP10-12P60413 245 aa7.34□□□□□ -1.24
CIRBP-202ENST00000413636 H3BS24 57 aa7.27□□□□□ -1.25
CIRBP-202ENST00000413636 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
CIRBP-202ENST00000413636 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
CIRBP-202ENST00000413636 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
CIRBP-202ENST00000413636 KMT2DO14686 5537 aa7.22□□□□□ -1.25
CIRBP-202ENST00000413636 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
CIRBP-202ENST00000413636 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
CIRBP-202ENST00000413636 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
CIRBP-202ENST00000413636 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.27
CIRBP-202ENST00000413636 KRTAP5-9P26371 169 aa7.05□□□□□ -1.28
CIRBP-202ENST00000413636 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
CIRBP-202ENST00000413636 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
CIRBP-202ENST00000413636 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
CIRBP-202ENST00000413636 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.31
CIRBP-202ENST00000413636 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
CIRBP-202ENST00000413636 MUC12Q9UKN1 5478 aa6.86□□□□□ -1.31
CIRBP-202ENST00000413636 MT1EP04732 61 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms