RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
SIK3-202ENST00000413553 HSPG2P98160 4391 aa4.74□□□□□ -1.65
SIK3-202ENST00000413553 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
SIK3-202ENST00000413553 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
SIK3-202ENST00000413553 DMBT1Q9UGM3 2413 aaPredicted RBP4.73□□□□□ -1.65
SIK3-202ENST00000413553 RYR1P21817 5038 aa4.7□□□□□ -1.66
SIK3-202ENST00000413553 A0A0D9SG42 100 aa4.69□□□□□ -1.66
SIK3-202ENST00000413553 P0C880 135 aa4.68□□□□□ -1.66
SIK3-202ENST00000413553 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
SIK3-202ENST00000413553 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
SIK3-202ENST00000413553 KRTAP17-1Q9BYP8 105 aa4.67□□□□□ -1.66
SIK3-202ENST00000413553 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
SIK3-202ENST00000413553 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
SIK3-202ENST00000413553 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
SIK3-202ENST00000413553 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
SIK3-202ENST00000413553 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
SIK3-202ENST00000413553 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
SIK3-202ENST00000413553 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
SIK3-202ENST00000413553 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
SIK3-202ENST00000413553 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
SIK3-202ENST00000413553 KRTAP3-3Q9BYR6 98 aa4.57□□□□□ -1.68
SIK3-202ENST00000413553 TNXBP22105 4242 aa4.57□□□□□ -1.68
SIK3-202ENST00000413553 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
SIK3-202ENST00000413553 S4R3F8 94 aa4.55□□□□□ -1.68
SIK3-202ENST00000413553 J3QL48 77 aa4.55□□□□□ -1.68
SIK3-202ENST00000413553 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SIK3-202ENST00000413553 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
SIK3-202ENST00000413553 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
SIK3-202ENST00000413553 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
SIK3-202ENST00000413553 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
SIK3-202ENST00000413553 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SIK3-202ENST00000413553 HERC2O95714 4834 aa4.47□□□□□ -1.69
SIK3-202ENST00000413553 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
SIK3-202ENST00000413553 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
SIK3-202ENST00000413553 XP32Q5T750 250 aa4.43□□□□□ -1.7
SIK3-202ENST00000413553 LPAP08519 4548 aa4.36□□□□□ -1.71
SIK3-202ENST00000413553 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
SIK3-202ENST00000413553 M0QZ58 72 aa4.35□□□□□ -1.71
SIK3-202ENST00000413553 LRP2P98164 4655 aa4.34□□□□□ -1.71
SIK3-202ENST00000413553 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
SIK3-202ENST00000413553 HERC1Q15751 4861 aa4.28□□□□□ -1.72
SIK3-202ENST00000413553 R4GN34 69 aa4.27□□□□□ -1.73
SIK3-202ENST00000413553 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
SIK3-202ENST00000413553 MUC2Q02817 5179 aa4.22□□□□□ -1.73
SIK3-202ENST00000413553 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
SIK3-202ENST00000413553 LORP23490 312 aaPredicted RBP4.14□□□□□ -1.75
SIK3-202ENST00000413553 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
SIK3-202ENST00000413553 KRTAP4-1Q9BYQ7 146 aa4.13□□□□□ -1.75
SIK3-202ENST00000413553 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
SIK3-202ENST00000413553 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
SIK3-202ENST00000413553 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
SIK3-202ENST00000413553 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
SIK3-202ENST00000413553 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
SIK3-202ENST00000413553 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
SIK3-202ENST00000413553 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
SIK3-202ENST00000413553 M0R2T5 61 aa3.96□□□□□ -1.77
SIK3-202ENST00000413553 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.77
SIK3-202ENST00000413553 TNP1P09430 55 aa3.93□□□□□ -1.78
SIK3-202ENST00000413553 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
SIK3-202ENST00000413553 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
SIK3-202ENST00000413553 MT1HP80294 61 aa3.85□□□□□ -1.79
SIK3-202ENST00000413553 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
SIK3-202ENST00000413553 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
SIK3-202ENST00000413553 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
SIK3-202ENST00000413553 MT2AP02795 61 aa3.7□□□□□ -1.82
SIK3-202ENST00000413553 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
SIK3-202ENST00000413553 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
SIK3-202ENST00000413553 MT1FP04733 61 aa3.69□□□□□ -1.82
SIK3-202ENST00000413553 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
SIK3-202ENST00000413553 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
SIK3-202ENST00000413553 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
SIK3-202ENST00000413553 KRTAP19-1Q8IUB9 90 aa3.63□□□□□ -1.83
SIK3-202ENST00000413553 INE1O15225 51 aa3.56□□□□□ -1.84
SIK3-202ENST00000413553 USH2AO75445 5202 aa3.56□□□□□ -1.84
SIK3-202ENST00000413553 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
SIK3-202ENST00000413553 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
SIK3-202ENST00000413553 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
SIK3-202ENST00000413553 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
SIK3-202ENST00000413553 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
SIK3-202ENST00000413553 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
SIK3-202ENST00000413553 MT1BP07438 61 aa3.47□□□□□ -1.85
SIK3-202ENST00000413553 LCE2BO14633 110 aa3.47□□□□□ -1.85
SIK3-202ENST00000413553 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
SIK3-202ENST00000413553 LCE2DQ5TA82 110 aaPredicted RBP3.45□□□□□ -1.86
SIK3-202ENST00000413553 MT1XP80297 61 aa3.44□□□□□ -1.86
SIK3-202ENST00000413553 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
SIK3-202ENST00000413553 KMT2DO14686 5537 aa3.37□□□□□ -1.87
SIK3-202ENST00000413553 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
SIK3-202ENST00000413553 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
SIK3-202ENST00000413553 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
SIK3-202ENST00000413553 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
SIK3-202ENST00000413553 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
SIK3-202ENST00000413553 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SIK3-202ENST00000413553 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
SIK3-202ENST00000413553 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
SIK3-202ENST00000413553 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
SIK3-202ENST00000413553 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
SIK3-202ENST00000413553 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
SIK3-202ENST00000413553 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
SIK3-202ENST00000413553 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms