RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 ARL14EPLP0DKL9 152 aa2.52□□□□□ -2.01
CBX1P3-201ENST00000413296 HTN3P15516 51 aa2.52□□□□□ -2.01
CBX1P3-201ENST00000413296 WT1-ASQ06250 92 aa2.52□□□□□ -2.01
CBX1P3-201ENST00000413296 ETDCA0A1B0GVM5 59 aa2.51□□□□□ -2.01
CBX1P3-201ENST00000413296 I3L2K1 104 aa2.51□□□□□ -2.01
CBX1P3-201ENST00000413296 ANGP03950 147 aaKnown RBP2.51□□□□□ -2.01
CBX1P3-201ENST00000413296 PLNP26678 52 aa2.51□□□□□ -2.01
CBX1P3-201ENST00000413296 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
CBX1P3-201ENST00000413296 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
CBX1P3-201ENST00000413296 MUC2Q02817 5179 aa2.5□□□□□ -2.01
CBX1P3-201ENST00000413296 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CBX1P3-201ENST00000413296 Q5VSD8 79 aa2.5□□□□□ -2.01
CBX1P3-201ENST00000413296 IGIPA6NJ69 53 aa2.49□□□□□ -2.01
CBX1P3-201ENST00000413296 DEFB130BP0DP73 79 aa2.49□□□□□ -2.01
CBX1P3-201ENST00000413296 DEFB130AP0DP74 79 aa2.49□□□□□ -2.01
CBX1P3-201ENST00000413296 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
CBX1P3-201ENST00000413296 RNF213Q63HN8 5207 aa2.49□□□□□ -2.01
CBX1P3-201ENST00000413296 H3BNG1 76 aa2.48□□□□□ -2.01
CBX1P3-201ENST00000413296 I3L3M4 83 aa2.48□□□□□ -2.01
CBX1P3-201ENST00000413296 SMR3BP02814 79 aaPredicted RBP2.48□□□□□ -2.01
CBX1P3-201ENST00000413296 PRCDQ00LT1 54 aa2.48□□□□□ -2.01
CBX1P3-201ENST00000413296 DEFB104AQ8WTQ1 72 aa2.48□□□□□ -2.01
CBX1P3-201ENST00000413296 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
CBX1P3-201ENST00000413296 TIMM8BQ9Y5J9 83 aaPredicted RBP2.47□□□□□ -2.01
CBX1P3-201ENST00000413296 VPS13BQ7Z7G8 4022 aa2.47□□□□□ -2.01
CBX1P3-201ENST00000413296 CRIPTQ9P021 101 aa2.46□□□□□ -2.02
CBX1P3-201ENST00000413296 FAT1Q14517 4588 aa2.45□□□□□ -2.02
CBX1P3-201ENST00000413296 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
CBX1P3-201ENST00000413296 SMIM27A0A1W2PRY6 76 aa2.45□□□□□ -2.02
CBX1P3-201ENST00000413296 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
CBX1P3-201ENST00000413296 A8MTW9 85 aa2.44□□□□□ -2.02
CBX1P3-201ENST00000413296 HTN1P15515 57 aa2.44□□□□□ -2.02
CBX1P3-201ENST00000413296 NOP10Q9NPE3 64 aaKnown RBP2.44□□□□□ -2.02
CBX1P3-201ENST00000413296 TP53AIP1Q9HCN2 124 aa2.43□□□□□ -2.02
CBX1P3-201ENST00000413296 DEFB1P60022 68 aa2.42□□□□□ -2.02
CBX1P3-201ENST00000413296 SPINK9Q5DT21 86 aa2.42□□□□□ -2.02
CBX1P3-201ENST00000413296 A0A096LPF7 62 aa2.41□□□□□ -2.02
CBX1P3-201ENST00000413296 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
CBX1P3-201ENST00000413296 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
CBX1P3-201ENST00000413296 Q6ZSA8 131 aa2.39□□□□□ -2.03
CBX1P3-201ENST00000413296 K7EQZ3 153 aa2.38□□□□□ -2.03
CBX1P3-201ENST00000413296 H0YGX0 51 aa2.37□□□□□ -2.03
CBX1P3-201ENST00000413296 SPINK4O60575 86 aa2.37□□□□□ -2.03
CBX1P3-201ENST00000413296 CRIP1P50238 77 aa2.37□□□□□ -2.03
CBX1P3-201ENST00000413296 LINC01546A6NGU7 62 aa2.36□□□□□ -2.03
CBX1P3-201ENST00000413296 LINC01556Q5JQF7 62 aa2.36□□□□□ -2.03
CBX1P3-201ENST00000413296 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
CBX1P3-201ENST00000413296 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
CBX1P3-201ENST00000413296 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
CBX1P3-201ENST00000413296 LRP2P98164 4655 aa2.36□□□□□ -2.03
CBX1P3-201ENST00000413296 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
CBX1P3-201ENST00000413296 WFDC10BQ8IUB3 73 aa2.35□□□□□ -2.03
CBX1P3-201ENST00000413296 KRTAP10-5P60370 271 aa2.34□□□□□ -2.03
CBX1P3-201ENST00000413296 CNFNQ9BYD5 112 aa2.34□□□□□ -2.03
CBX1P3-201ENST00000413296 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
CBX1P3-201ENST00000413296 LELP1Q5T871 98 aa2.33□□□□□ -2.04
CBX1P3-201ENST00000413296 CDKN2A-AS1Q9UH64 79 aa2.33□□□□□ -2.04
CBX1P3-201ENST00000413296 IAPPP10997 89 aa2.32□□□□□ -2.04
CBX1P3-201ENST00000413296 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
CBX1P3-201ENST00000413296 FAT3Q8TDW7 4589 aa2.31□□□□□ -2.04
CBX1P3-201ENST00000413296 COX6B2Q6YFQ2 88 aa2.31□□□□□ -2.04
CBX1P3-201ENST00000413296 PKHD1L1Q86WI1 4243 aa2.31□□□□□ -2.04
CBX1P3-201ENST00000413296 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
CBX1P3-201ENST00000413296 DNAH8Q96JB1 4490 aa2.3□□□□□ -2.04
CBX1P3-201ENST00000413296 LINC00158P58513 81 aa2.29□□□□□ -2.04
CBX1P3-201ENST00000413296 COX6A2Q02221 97 aa2.29□□□□□ -2.04
CBX1P3-201ENST00000413296 Q8IZM0 81 aa2.29□□□□□ -2.04
CBX1P3-201ENST00000413296 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
CBX1P3-201ENST00000413296 SPINK6Q6UWN8 80 aa2.27□□□□□ -2.05
CBX1P3-201ENST00000413296 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
CBX1P3-201ENST00000413296 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
CBX1P3-201ENST00000413296 TNXBP22105 4242 aa2.25□□□□□ -2.05
CBX1P3-201ENST00000413296 TMEM167BQ9NRX6 74 aa2.25□□□□□ -2.05
CBX1P3-201ENST00000413296 LINC00308Q8TCZ7 52 aa2.21□□□□□ -2.06
CBX1P3-201ENST00000413296 H0YAA0 97 aa2.18□□□□□ -2.06
CBX1P3-201ENST00000413296 LPAP08519 4548 aa2.18□□□□□ -2.06
CBX1P3-201ENST00000413296 SPRR1AP35321 89 aa2.17□□□□□ -2.06
CBX1P3-201ENST00000413296 CLPSL2Q6UWE3 100 aa2.17□□□□□ -2.06
CBX1P3-201ENST00000413296 A0A096LNI7 61 aa2.16□□□□□ -2.06
CBX1P3-201ENST00000413296 A0A0D9SG42 100 aa2.15□□□□□ -2.07
CBX1P3-201ENST00000413296 M0QY20 66 aa2.15□□□□□ -2.07
CBX1P3-201ENST00000413296 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
CBX1P3-201ENST00000413296 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
CBX1P3-201ENST00000413296 DEFB105AQ8NG35 78 aa2.12□□□□□ -2.07
CBX1P3-201ENST00000413296 C6orf48Q9UBA6 75 aa2.12□□□□□ -2.07
CBX1P3-201ENST00000413296 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
CBX1P3-201ENST00000413296 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
CBX1P3-201ENST00000413296 WFDC13Q8IUB5 93 aa2.1□□□□□ -2.07
CBX1P3-201ENST00000413296 SPRR1BP22528 89 aa2.09□□□□□ -2.07
CBX1P3-201ENST00000413296 SMIM2Q9BVW6 85 aa2.09□□□□□ -2.07
CBX1P3-201ENST00000413296 NDUFA1O15239 70 aa2.08□□□□□ -2.08
CBX1P3-201ENST00000413296 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
CBX1P3-201ENST00000413296 POLR2KP53803 58 aaKnown RBP2.05□□□□□ -2.08
CBX1P3-201ENST00000413296 RPL39LQ96EH5 51 aaKnown RBP2.05□□□□□ -2.08
CBX1P3-201ENST00000413296 SPINK1P00995 79 aa2.02□□□□□ -2.09
CBX1P3-201ENST00000413296 MUC17Q685J3 4493 aa2.02□□□□□ -2.09
CBX1P3-201ENST00000413296 M0R2T5 61 aa2.01□□□□□ -2.09
CBX1P3-201ENST00000413296 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
CBX1P3-201ENST00000413296 MT1HP80294 61 aa1.99□□□□□ -2.09
CBX1P3-201ENST00000413296 TOMM7Q9P0U1 55 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms