RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SPATA45Q537H7 98 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 ADM2Q7Z4H4 148 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 VAMP8Q9BV40 100 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 C14orf132Q9NPU4 83 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 R4GN34 69 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 A0A087WVE0 104 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 S100A6P06703 90 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 MT4P47944 62 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 HSD52Q0P140 79 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 ATXN8Q156A1 80 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 LCE4AQ5TA78 99 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 LCE5AQ5TCM9 118 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
RNU4-53P-201ENST00000410828 M0QZ58 72 aa0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 S100A1P23297 94 aa0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 KRTAP19-3Q7Z4W3 81 aa0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 C20orf197Q8N268 126 aa0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 Q8N9L7 120 aa0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 NAA38Q9BRA0 125 aaKnown RBP0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 TP53AIP1Q9HCN2 124 aa0.91□□□□□ -2.26
RNU4-53P-201ENST00000410828 SPRR5A0A1B0GTR4 108 aa0.9□□□□□ -2.27
RNU4-53P-201ENST00000410828 LINC01554Q52M75 96 aa0.9□□□□□ -2.27
RNU4-53P-201ENST00000410828 KRTAP5-3Q6L8H2 238 aa0.9□□□□□ -2.27
RNU4-53P-201ENST00000410828 CYP4F30PQ9H0H9 118 aa0.9□□□□□ -2.27
RNU4-53P-201ENST00000410828 CYSTM1Q9H1C7 97 aa0.9□□□□□ -2.27
RNU4-53P-201ENST00000410828 ACYP1P07311 99 aa0.89□□□□□ -2.27
RNU4-53P-201ENST00000410828 TRAV22A0A0B4J277 110 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 LOC101927531A0A1B0GV80 90 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 K7EP34 96 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 MT1EP04732 61 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 P0C880 135 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 MT1GP13640 62 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 BATFQ16520 125 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 KRTAP19-7Q3SYF9 63 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 PP632Q6XCG6 107 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 KRTAP4-6Q9BYQ5 205 aa0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
RNU4-53P-201ENST00000410828 TSTD3H0UI37 97 aa0.87□□□□□ -2.27
RNU4-53P-201ENST00000410828 MT-ATP8P03928 68 aa0.87□□□□□ -2.27
RNU4-53P-201ENST00000410828 KRTAP5-4Q6L8H1 288 aa0.87□□□□□ -2.27
RNU4-53P-201ENST00000410828 UBL5Q9BZL1 73 aa0.87□□□□□ -2.27
RNU4-53P-201ENST00000410828 UQCR10Q9UDW1 63 aa0.87□□□□□ -2.27
RNU4-53P-201ENST00000410828 H3BT86 120 aa0.86□□□□□ -2.27
RNU4-53P-201ENST00000410828 M0R143 59 aa0.85□□□□□ -2.27
RNU4-53P-201ENST00000410828 ATOX1O00244 68 aa0.85□□□□□ -2.27
RNU4-53P-201ENST00000410828 PYY3Q5JQD4 70 aa0.85□□□□□ -2.27
RNU4-53P-201ENST00000410828 MT1MQ8N339 61 aa0.85□□□□□ -2.27
RNU4-53P-201ENST00000410828 KRTAP3-2Q9BYR7 98 aa0.85□□□□□ -2.27
RNU4-53P-201ENST00000410828 SPCS1Q9Y6A9 102 aa0.85□□□□□ -2.27
RNU4-53P-201ENST00000410828 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
RNU4-53P-201ENST00000410828 A0A1W2PPM0 123 aa0.84□□□□□ -2.27
RNU4-53P-201ENST00000410828 CAMK2N1Q7Z7J9 78 aa0.84□□□□□ -2.27
RNU4-53P-201ENST00000410828 H0Y9P7 68 aa0.83□□□□□ -2.28
RNU4-53P-201ENST00000410828 UQCRQO14949 82 aa0.83□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP20-2Q3LI61 65 aa0.83□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
RNU4-53P-201ENST00000410828 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
RNU4-53P-201ENST00000410828 A0A0D9SG42 100 aa0.82□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP12-4P60329 112 aa0.82□□□□□ -2.28
RNU4-53P-201ENST00000410828 MT1LQ93083 61 aa0.82□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP4-3Q9BYR4 195 aa0.82□□□□□ -2.28
RNU4-53P-201ENST00000410828 C9orf118A6NHY6 69 aa0.81□□□□□ -2.28
RNU4-53P-201ENST00000410828 TAX1BP3O14907 124 aa0.81□□□□□ -2.28
RNU4-53P-201ENST00000410828 LINC00208Q96KT6 92 aa0.81□□□□□ -2.28
RNU4-53P-201ENST00000410828 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
RNU4-53P-201ENST00000410828 MP68P56378 58 aa0.8□□□□□ -2.28
RNU4-53P-201ENST00000410828 DMAC1Q96GE9 116 aa0.8□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP4-11Q9BYQ6 195 aa0.8□□□□□ -2.28
RNU4-53P-201ENST00000410828 TRAV7A0A075B6U4 112 aa0.79□□□□□ -2.28
RNU4-53P-201ENST00000410828 HIST1H4AP62805 103 aaKnown RBP0.79□□□□□ -2.28
RNU4-53P-201ENST00000410828 SPTSSBQ8NFR3 76 aa0.79□□□□□ -2.28
RNU4-53P-201ENST00000410828 OBSCNQ5VST9 7968 aa0.78□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP5-5Q701N2 237 aaPredicted RBP0.78□□□□□ -2.28
RNU4-53P-201ENST00000410828 KRTAP4-7Q9BYR0 210 aa0.78□□□□□ -2.28
RNU4-53P-201ENST00000410828 H3BPC8 53 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 ACYP2P14621 99 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 KRTAP13-4Q3LI77 160 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 ATP5EP2Q5VTU8 51 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 PRO0461Q9UI25 63 aa0.77□□□□□ -2.29
RNU4-53P-201ENST00000410828 CHKB-CPT1BH3BT56 60 aa0.76□□□□□ -2.29
RNU4-53P-201ENST00000410828 SPINT4Q6UDR6 99 aa0.76□□□□□ -2.29
RNU4-53P-201ENST00000410828 KRTAP9-9Q9BYP9 154 aa0.76□□□□□ -2.29
RNU4-53P-201ENST00000410828 OCR1Q9BZK8 76 aa0.76□□□□□ -2.29
RNU4-53P-201ENST00000410828 ETDBQ3ZM63 59 aa0.75□□□□□ -2.29
RNU4-53P-201ENST00000410828 LCE3AQ5TA76 89 aa0.75□□□□□ -2.29
RNU4-53P-201ENST00000410828 LOC100996750A0A140TA64 210 aa0.74□□□□□ -2.29
RNU4-53P-201ENST00000410828 F8W1H4 67 aa0.74□□□□□ -2.29
RNU4-53P-201ENST00000410828 TNP1P09430 55 aa0.74□□□□□ -2.29
RNU4-53P-201ENST00000410828 KRTAP5-2Q701N4 177 aa0.74□□□□□ -2.29
RNU4-53P-201ENST00000410828 TMA7Q9Y2S6 64 aaKnown RBP0.74□□□□□ -2.29
RNU4-53P-201ENST00000410828 FAM240AA0A1B0GVK7 77 aa0.73□□□□□ -2.29
RNU4-53P-201ENST00000410828 SMIM6P0DI80 62 aa0.73□□□□□ -2.29
RNU4-53P-201ENST00000410828 KRTAP12-3P60328 96 aa0.73□□□□□ -2.29
RNU4-53P-201ENST00000410828 GTF2H5Q6ZYL4 71 aa0.73□□□□□ -2.29
RNU4-53P-201ENST00000410828 SCGB1A1P11684 91 aa0.72□□□□□ -2.29
RNU4-53P-201ENST00000410828 KRTAP12-1P59990 96 aa0.72□□□□□ -2.29
RNU4-53P-201ENST00000410828 COL5A1-AS1Q5SY13 56 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms