RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
GCFC2-202ENST00000409857 A0A1B0GU69 56 aa9.32□□□□□ -0.92
GCFC2-202ENST00000409857 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
GCFC2-202ENST00000409857 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
GCFC2-202ENST00000409857 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
GCFC2-202ENST00000409857 TPRXLQ17RH7 258 aa9.21□□□□□ -0.94
GCFC2-202ENST00000409857 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
GCFC2-202ENST00000409857 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
GCFC2-202ENST00000409857 UQCR11O14957 56 aa9.14□□□□□ -0.95
GCFC2-202ENST00000409857 LPAP08519 4548 aa9.09□□□□□ -0.95
GCFC2-202ENST00000409857 LRP2P98164 4655 aa9.05□□□□□ -0.96
GCFC2-202ENST00000409857 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
GCFC2-202ENST00000409857 C9orf92A6NGG3 77 aa9.02□□□□□ -0.96
GCFC2-202ENST00000409857 XP32Q5T750 250 aa9.01□□□□□ -0.97
GCFC2-202ENST00000409857 RPL37P61927 97 aaKnown RBP8.9□□□□□ -0.99
GCFC2-202ENST00000409857 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
GCFC2-202ENST00000409857 C20orf166-AS1Q96NR2 134 aa8.89□□□□□ -0.99
GCFC2-202ENST00000409857 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
GCFC2-202ENST00000409857 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
GCFC2-202ENST00000409857 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
GCFC2-202ENST00000409857 A8MUU9 505 aa8.87□□□□□ -0.99
GCFC2-202ENST00000409857 H0YAA0 97 aa8.87□□□□□ -0.99
GCFC2-202ENST00000409857 A0A1B0GU33 70 aa8.77□□□□□ -1.01
GCFC2-202ENST00000409857 ROMO1P60602 79 aa8.74□□□□□ -1.01
GCFC2-202ENST00000409857 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
GCFC2-202ENST00000409857 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.02
GCFC2-202ENST00000409857 RNF213Q63HN8 5207 aa8.71□□□□□ -1.02
GCFC2-202ENST00000409857 KRTAP4-1Q9BYQ7 146 aa8.68□□□□□ -1.02
GCFC2-202ENST00000409857 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
GCFC2-202ENST00000409857 MUC2Q02817 5179 aa8.61□□□□□ -1.03
GCFC2-202ENST00000409857 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
GCFC2-202ENST00000409857 P0C880 135 aa8.51□□□□□ -1.05
GCFC2-202ENST00000409857 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
GCFC2-202ENST00000409857 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.05
GCFC2-202ENST00000409857 K7ERS5 55 aa8.46□□□□□ -1.06
GCFC2-202ENST00000409857 KRTAP19-2Q3LHN2 52 aa8.45□□□□□ -1.06
GCFC2-202ENST00000409857 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
GCFC2-202ENST00000409857 A0A0D9SG42 100 aa8.41□□□□□ -1.06
GCFC2-202ENST00000409857 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
GCFC2-202ENST00000409857 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
GCFC2-202ENST00000409857 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
GCFC2-202ENST00000409857 S4R3F8 94 aa8.34□□□□□ -1.07
GCFC2-202ENST00000409857 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
GCFC2-202ENST00000409857 MT1HP80294 61 aa8.26□□□□□ -1.09
GCFC2-202ENST00000409857 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
GCFC2-202ENST00000409857 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
GCFC2-202ENST00000409857 C10orf95Q9H7T3 257 aa8.19□□□□□ -1.1
GCFC2-202ENST00000409857 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
GCFC2-202ENST00000409857 NDUFAF8A1L188 74 aa8.14□□□□□ -1.11
GCFC2-202ENST00000409857 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
GCFC2-202ENST00000409857 M0R2T5 61 aa8.1□□□□□ -1.11
GCFC2-202ENST00000409857 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
GCFC2-202ENST00000409857 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
GCFC2-202ENST00000409857 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
GCFC2-202ENST00000409857 M0QZ58 72 aa7.91□□□□□ -1.14
GCFC2-202ENST00000409857 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
GCFC2-202ENST00000409857 MT2AP02795 61 aa7.81□□□□□ -1.16
GCFC2-202ENST00000409857 R4GN34 69 aa7.76□□□□□ -1.17
GCFC2-202ENST00000409857 MT1FP04733 61 aa7.75□□□□□ -1.17
GCFC2-202ENST00000409857 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
GCFC2-202ENST00000409857 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
GCFC2-202ENST00000409857 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
GCFC2-202ENST00000409857 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
GCFC2-202ENST00000409857 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
GCFC2-202ENST00000409857 LCE2BO14633 110 aa7.47□□□□□ -1.21
GCFC2-202ENST00000409857 SPRR2GQ9BYE4 73 aa7.45□□□□□ -1.22
GCFC2-202ENST00000409857 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
GCFC2-202ENST00000409857 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
GCFC2-202ENST00000409857 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
GCFC2-202ENST00000409857 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
GCFC2-202ENST00000409857 USH2AO75445 5202 aa7.33□□□□□ -1.24
GCFC2-202ENST00000409857 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
GCFC2-202ENST00000409857 FSIP2Q5CZC0 6907 aa7.27□□□□□ -1.25
GCFC2-202ENST00000409857 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
GCFC2-202ENST00000409857 MT1BP07438 61 aa7.24□□□□□ -1.25
GCFC2-202ENST00000409857 KRTAP9-6A0A140TA67 174 aa7.23□□□□□ -1.25
GCFC2-202ENST00000409857 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
GCFC2-202ENST00000409857 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
GCFC2-202ENST00000409857 TNP1P09430 55 aa7.09□□□□□ -1.27
GCFC2-202ENST00000409857 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
GCFC2-202ENST00000409857 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
GCFC2-202ENST00000409857 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
GCFC2-202ENST00000409857 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
GCFC2-202ENST00000409857 MT1XP80297 61 aa6.9□□□□□ -1.31
GCFC2-202ENST00000409857 SPRR5A0A1B0GTR4 108 aa6.87□□□□□ -1.31
GCFC2-202ENST00000409857 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
GCFC2-202ENST00000409857 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
GCFC2-202ENST00000409857 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
GCFC2-202ENST00000409857 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
GCFC2-202ENST00000409857 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
GCFC2-202ENST00000409857 KRTAP9-7A8MTY7 169 aa6.54□□□□□ -1.36
GCFC2-202ENST00000409857 SYNE2Q8WXH0 6885 aaKnown RBP6.53□□□□□ -1.36
GCFC2-202ENST00000409857 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
GCFC2-202ENST00000409857 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
GCFC2-202ENST00000409857 INE1O15225 51 aa6.5□□□□□ -1.37
GCFC2-202ENST00000409857 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
GCFC2-202ENST00000409857 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
GCFC2-202ENST00000409857 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
GCFC2-202ENST00000409857 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
GCFC2-202ENST00000409857 KMT2DO14686 5537 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms