RNA–Protein interactions for RNA: ENST00000409549.5

LOXL3-204, Transcript of lysyl oxidase like 3, humanhuman

TSL 2 BASIC

Gene LOXL3, Length 2,897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-204ENST00000409549 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
LOXL3-204ENST00000409549 A0A1B0GU33 70 aa7.1□□□□□ -1.27
LOXL3-204ENST00000409549 Q5VSD8 79 aa7.1□□□□□ -1.27
LOXL3-204ENST00000409549 HERC2O95714 4834 aa7.09□□□□□ -1.27
LOXL3-204ENST00000409549 KRTAP1-4P0C5Y4 121 aa7.07□□□□□ -1.28
LOXL3-204ENST00000409549 C9orf92A6NGG3 77 aa7.03□□□□□ -1.28
LOXL3-204ENST00000409549 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
LOXL3-204ENST00000409549 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
LOXL3-204ENST00000409549 P0C880 135 aa6.99□□□□□ -1.29
LOXL3-204ENST00000409549 HERC1Q15751 4861 aa6.95□□□□□ -1.3
LOXL3-204ENST00000409549 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
LOXL3-204ENST00000409549 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
LOXL3-204ENST00000409549 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.31
LOXL3-204ENST00000409549 A0A0D9SG42 100 aa6.89□□□□□ -1.31
LOXL3-204ENST00000409549 K7ERS5 55 aa6.89□□□□□ -1.31
LOXL3-204ENST00000409549 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
LOXL3-204ENST00000409549 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
LOXL3-204ENST00000409549 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
LOXL3-204ENST00000409549 J3QL48 77 aa6.83□□□□□ -1.32
LOXL3-204ENST00000409549 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
LOXL3-204ENST00000409549 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
LOXL3-204ENST00000409549 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
LOXL3-204ENST00000409549 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
LOXL3-204ENST00000409549 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
LOXL3-204ENST00000409549 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
LOXL3-204ENST00000409549 TNXBP22105 4242 aa6.74□□□□□ -1.33
LOXL3-204ENST00000409549 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
LOXL3-204ENST00000409549 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
LOXL3-204ENST00000409549 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
LOXL3-204ENST00000409549 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
LOXL3-204ENST00000409549 LPAP08519 4548 aa6.65□□□□□ -1.35
LOXL3-204ENST00000409549 LRP2P98164 4655 aa6.65□□□□□ -1.35
LOXL3-204ENST00000409549 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.35
LOXL3-204ENST00000409549 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
LOXL3-204ENST00000409549 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
LOXL3-204ENST00000409549 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
LOXL3-204ENST00000409549 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
LOXL3-204ENST00000409549 S4R3F8 94 aa6.58□□□□□ -1.36
LOXL3-204ENST00000409549 RNF213Q63HN8 5207 aa6.57□□□□□ -1.36
LOXL3-204ENST00000409549 MUC2Q02817 5179 aa6.53□□□□□ -1.36
LOXL3-204ENST00000409549 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
LOXL3-204ENST00000409549 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
LOXL3-204ENST00000409549 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
LOXL3-204ENST00000409549 XP32Q5T750 250 aa6.38□□□□□ -1.39
LOXL3-204ENST00000409549 M0QZ58 72 aa6.22□□□□□ -1.41
LOXL3-204ENST00000409549 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
LOXL3-204ENST00000409549 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
LOXL3-204ENST00000409549 R4GN34 69 aa6.15□□□□□ -1.43
LOXL3-204ENST00000409549 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
LOXL3-204ENST00000409549 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
LOXL3-204ENST00000409549 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
LOXL3-204ENST00000409549 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
LOXL3-204ENST00000409549 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
LOXL3-204ENST00000409549 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
LOXL3-204ENST00000409549 M0R2T5 61 aa5.81□□□□□ -1.48
LOXL3-204ENST00000409549 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
LOXL3-204ENST00000409549 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
LOXL3-204ENST00000409549 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
LOXL3-204ENST00000409549 LCE2CQ5TA81 110 aa5.71□□□□□ -1.5
LOXL3-204ENST00000409549 MT1HP80294 61 aa5.66□□□□□ -1.5
LOXL3-204ENST00000409549 TNP1P09430 55 aa5.63□□□□□ -1.51
LOXL3-204ENST00000409549 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
LOXL3-204ENST00000409549 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
LOXL3-204ENST00000409549 USH2AO75445 5202 aa5.55□□□□□ -1.52
LOXL3-204ENST00000409549 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
LOXL3-204ENST00000409549 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
LOXL3-204ENST00000409549 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
LOXL3-204ENST00000409549 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
LOXL3-204ENST00000409549 MT1FP04733 61 aa5.37□□□□□ -1.55
LOXL3-204ENST00000409549 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
LOXL3-204ENST00000409549 MT2AP02795 61 aa5.36□□□□□ -1.55
LOXL3-204ENST00000409549 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
LOXL3-204ENST00000409549 KRTAP19-1Q8IUB9 90 aa5.28□□□□□ -1.56
LOXL3-204ENST00000409549 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
LOXL3-204ENST00000409549 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
LOXL3-204ENST00000409549 INE1O15225 51 aa5.21□□□□□ -1.58
LOXL3-204ENST00000409549 LCE2BO14633 110 aa5.18□□□□□ -1.58
LOXL3-204ENST00000409549 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
LOXL3-204ENST00000409549 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
LOXL3-204ENST00000409549 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
LOXL3-204ENST00000409549 MT1BP07438 61 aa5.06□□□□□ -1.6
LOXL3-204ENST00000409549 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
LOXL3-204ENST00000409549 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
LOXL3-204ENST00000409549 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
LOXL3-204ENST00000409549 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
LOXL3-204ENST00000409549 KRTAP10-12P60413 245 aa5□□□□□ -1.61
LOXL3-204ENST00000409549 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
LOXL3-204ENST00000409549 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
LOXL3-204ENST00000409549 KMT2DO14686 5537 aa4.99□□□□□ -1.61
LOXL3-204ENST00000409549 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
LOXL3-204ENST00000409549 MT1XP80297 61 aa4.98□□□□□ -1.61
LOXL3-204ENST00000409549 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
LOXL3-204ENST00000409549 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
LOXL3-204ENST00000409549 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
LOXL3-204ENST00000409549 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
LOXL3-204ENST00000409549 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
LOXL3-204ENST00000409549 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
LOXL3-204ENST00000409549 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
LOXL3-204ENST00000409549 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
LOXL3-204ENST00000409549 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms