RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-204ENST00000405570 C9orf92A6NGG3 77 aa5.3□□□□□ -1.56
CTNNB1-204ENST00000405570 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
CTNNB1-204ENST00000405570 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
CTNNB1-204ENST00000405570 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
CTNNB1-204ENST00000405570 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
CTNNB1-204ENST00000405570 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
CTNNB1-204ENST00000405570 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
CTNNB1-204ENST00000405570 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
CTNNB1-204ENST00000405570 HSPG2P98160 4391 aa5.22□□□□□ -1.57
CTNNB1-204ENST00000405570 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
CTNNB1-204ENST00000405570 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
CTNNB1-204ENST00000405570 A0A0D9SG42 100 aa5.21□□□□□ -1.58
CTNNB1-204ENST00000405570 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
CTNNB1-204ENST00000405570 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
CTNNB1-204ENST00000405570 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
CTNNB1-204ENST00000405570 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
CTNNB1-204ENST00000405570 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
CTNNB1-204ENST00000405570 RYR1P21817 5038 aa5.17□□□□□ -1.58
CTNNB1-204ENST00000405570 EPPK1P58107 5090 aaKnown RBP5.17□□□□□ -1.58
CTNNB1-204ENST00000405570 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
CTNNB1-204ENST00000405570 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.58
CTNNB1-204ENST00000405570 Q5VSD8 79 aa5.13□□□□□ -1.59
CTNNB1-204ENST00000405570 TNXBP22105 4242 aa5.1□□□□□ -1.59
CTNNB1-204ENST00000405570 S4R3F8 94 aa5.09□□□□□ -1.59
CTNNB1-204ENST00000405570 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
CTNNB1-204ENST00000405570 FAT3Q8TDW7 4589 aa5.05□□□□□ -1.6
CTNNB1-204ENST00000405570 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
CTNNB1-204ENST00000405570 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
CTNNB1-204ENST00000405570 KRTAP12-1P59990 96 aa5□□□□□ -1.61
CTNNB1-204ENST00000405570 XP32Q5T750 250 aa4.99□□□□□ -1.61
CTNNB1-204ENST00000405570 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
CTNNB1-204ENST00000405570 MT1HL1P0DM35 61 aa4.96□□□□□ -1.62
CTNNB1-204ENST00000405570 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
CTNNB1-204ENST00000405570 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
CTNNB1-204ENST00000405570 M0QZ58 72 aa4.86□□□□□ -1.63
CTNNB1-204ENST00000405570 J3QL48 77 aa4.85□□□□□ -1.63
CTNNB1-204ENST00000405570 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
CTNNB1-204ENST00000405570 HERC2O95714 4834 aa4.84□□□□□ -1.64
CTNNB1-204ENST00000405570 LPAP08519 4548 aa4.81□□□□□ -1.64
CTNNB1-204ENST00000405570 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
CTNNB1-204ENST00000405570 LRP2P98164 4655 aa4.77□□□□□ -1.65
CTNNB1-204ENST00000405570 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
CTNNB1-204ENST00000405570 R4GN34 69 aa4.69□□□□□ -1.66
CTNNB1-204ENST00000405570 PCLOQ9Y6V0 5065 aa4.69□□□□□ -1.66
CTNNB1-204ENST00000405570 LCE2BO14633 110 aa4.64□□□□□ -1.67
CTNNB1-204ENST00000405570 HERC1Q15751 4861 aa4.64□□□□□ -1.67
CTNNB1-204ENST00000405570 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
CTNNB1-204ENST00000405570 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
CTNNB1-204ENST00000405570 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
CTNNB1-204ENST00000405570 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
CTNNB1-204ENST00000405570 MUC2Q02817 5179 aa4.55□□□□□ -1.68
CTNNB1-204ENST00000405570 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
CTNNB1-204ENST00000405570 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
CTNNB1-204ENST00000405570 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
CTNNB1-204ENST00000405570 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
CTNNB1-204ENST00000405570 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
CTNNB1-204ENST00000405570 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
CTNNB1-204ENST00000405570 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
CTNNB1-204ENST00000405570 LCE2AQ5TA79 106 aaPredicted RBP4.36□□□□□ -1.71
CTNNB1-204ENST00000405570 TNP1P09430 55 aa4.35□□□□□ -1.71
CTNNB1-204ENST00000405570 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
CTNNB1-204ENST00000405570 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
CTNNB1-204ENST00000405570 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
CTNNB1-204ENST00000405570 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
CTNNB1-204ENST00000405570 MT1HP80294 61 aa4.17□□□□□ -1.74
CTNNB1-204ENST00000405570 M0R2T5 61 aa4.15□□□□□ -1.74
CTNNB1-204ENST00000405570 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
CTNNB1-204ENST00000405570 INE1O15225 51 aa4.1□□□□□ -1.75
CTNNB1-204ENST00000405570 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
CTNNB1-204ENST00000405570 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
CTNNB1-204ENST00000405570 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
CTNNB1-204ENST00000405570 MT2AP02795 61 aa4.03□□□□□ -1.76
CTNNB1-204ENST00000405570 MT1FP04733 61 aa4.03□□□□□ -1.76
CTNNB1-204ENST00000405570 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
CTNNB1-204ENST00000405570 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
CTNNB1-204ENST00000405570 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
CTNNB1-204ENST00000405570 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
CTNNB1-204ENST00000405570 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
CTNNB1-204ENST00000405570 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
CTNNB1-204ENST00000405570 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
CTNNB1-204ENST00000405570 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
CTNNB1-204ENST00000405570 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
CTNNB1-204ENST00000405570 MT1BP07438 61 aa3.83□□□□□ -1.8
CTNNB1-204ENST00000405570 MT1XP80297 61 aa3.83□□□□□ -1.8
CTNNB1-204ENST00000405570 USH2AO75445 5202 aa3.79□□□□□ -1.8
CTNNB1-204ENST00000405570 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
CTNNB1-204ENST00000405570 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
CTNNB1-204ENST00000405570 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
CTNNB1-204ENST00000405570 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
CTNNB1-204ENST00000405570 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
CTNNB1-204ENST00000405570 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
CTNNB1-204ENST00000405570 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
CTNNB1-204ENST00000405570 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
CTNNB1-204ENST00000405570 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
CTNNB1-204ENST00000405570 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
CTNNB1-204ENST00000405570 KMT2DO14686 5537 aa3.57□□□□□ -1.84
CTNNB1-204ENST00000405570 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
CTNNB1-204ENST00000405570 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
CTNNB1-204ENST00000405570 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
CTNNB1-204ENST00000405570 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms