RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 C14orf132Q9NPU4 83 aa4.94□□□□□ -1.62
SPTLC1P3-201ENST00000403408 A0A087WVE0 104 aa4.93□□□□□ -1.62
SPTLC1P3-201ENST00000403408 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
SPTLC1P3-201ENST00000403408 HCG22E2RYF7 251 aa4.92□□□□□ -1.62
SPTLC1P3-201ENST00000403408 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
SPTLC1P3-201ENST00000403408 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
SPTLC1P3-201ENST00000403408 JMJD7-PLA2G4BH0Y9G9 81 aa4.91□□□□□ -1.62
SPTLC1P3-201ENST00000403408 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
SPTLC1P3-201ENST00000403408 Q8N9L7 120 aa4.9□□□□□ -1.63
SPTLC1P3-201ENST00000403408 PDE6GP18545 87 aa4.87□□□□□ -1.63
SPTLC1P3-201ENST00000403408 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
SPTLC1P3-201ENST00000403408 CASC2Q6XLA1 102 aa4.86□□□□□ -1.63
SPTLC1P3-201ENST00000403408 NAA38Q9BRA0 125 aaKnown RBP4.85□□□□□ -1.63
SPTLC1P3-201ENST00000403408 S100A1P23297 94 aa4.84□□□□□ -1.63
SPTLC1P3-201ENST00000403408 CXCL6P80162 114 aa4.84□□□□□ -1.63
SPTLC1P3-201ENST00000403408 BPY2O14599 106 aa4.83□□□□□ -1.64
SPTLC1P3-201ENST00000403408 ATXN8Q156A1 80 aa4.82□□□□□ -1.64
SPTLC1P3-201ENST00000403408 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
SPTLC1P3-201ENST00000403408 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
SPTLC1P3-201ENST00000403408 PYY3Q5JQD4 70 aa4.8□□□□□ -1.64
SPTLC1P3-201ENST00000403408 A8MUN3 132 aa4.76□□□□□ -1.65
SPTLC1P3-201ENST00000403408 H0YAA0 97 aa4.75□□□□□ -1.65
SPTLC1P3-201ENST00000403408 UQCR10Q9UDW1 63 aa4.75□□□□□ -1.65
SPTLC1P3-201ENST00000403408 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
SPTLC1P3-201ENST00000403408 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
SPTLC1P3-201ENST00000403408 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
SPTLC1P3-201ENST00000403408 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
SPTLC1P3-201ENST00000403408 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
SPTLC1P3-201ENST00000403408 CYP4F30PQ9H0H9 118 aa4.68□□□□□ -1.66
SPTLC1P3-201ENST00000403408 K7EP34 96 aa4.66□□□□□ -1.66
SPTLC1P3-201ENST00000403408 NDUFC1O43677 76 aa4.62□□□□□ -1.67
SPTLC1P3-201ENST00000403408 P0C880 135 aa4.62□□□□□ -1.67
SPTLC1P3-201ENST00000403408 H3BT86 120 aa4.6□□□□□ -1.67
SPTLC1P3-201ENST00000403408 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
SPTLC1P3-201ENST00000403408 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
SPTLC1P3-201ENST00000403408 R4GN34 69 aa4.57□□□□□ -1.68
SPTLC1P3-201ENST00000403408 TSTD3H0UI37 97 aa4.55□□□□□ -1.68
SPTLC1P3-201ENST00000403408 M0QZ58 72 aa4.55□□□□□ -1.68
SPTLC1P3-201ENST00000403408 M0R143 59 aa4.55□□□□□ -1.68
SPTLC1P3-201ENST00000403408 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
SPTLC1P3-201ENST00000403408 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
SPTLC1P3-201ENST00000403408 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
SPTLC1P3-201ENST00000403408 LOC101927531A0A1B0GV80 90 aa4.51□□□□□ -1.69
SPTLC1P3-201ENST00000403408 MT4P47944 62 aa4.51□□□□□ -1.69
SPTLC1P3-201ENST00000403408 UBL5Q9BZL1 73 aa4.5□□□□□ -1.69
SPTLC1P3-201ENST00000403408 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
SPTLC1P3-201ENST00000403408 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
SPTLC1P3-201ENST00000403408 MT1EP04732 61 aa4.48□□□□□ -1.69
SPTLC1P3-201ENST00000403408 A0A1W2PPM0 123 aa4.46□□□□□ -1.7
SPTLC1P3-201ENST00000403408 TAX1BP3O14907 124 aa4.46□□□□□ -1.7
SPTLC1P3-201ENST00000403408 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
SPTLC1P3-201ENST00000403408 ACYP1P07311 99 aa4.44□□□□□ -1.7
SPTLC1P3-201ENST00000403408 BATFQ16520 125 aa4.43□□□□□ -1.7
SPTLC1P3-201ENST00000403408 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
SPTLC1P3-201ENST00000403408 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
SPTLC1P3-201ENST00000403408 C20orf197Q8N268 126 aa4.39□□□□□ -1.71
SPTLC1P3-201ENST00000403408 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
SPTLC1P3-201ENST00000403408 H0Y9P7 68 aa4.37□□□□□ -1.71
SPTLC1P3-201ENST00000403408 TMA7Q9Y2S6 64 aaKnown RBP4.37□□□□□ -1.71
SPTLC1P3-201ENST00000403408 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
SPTLC1P3-201ENST00000403408 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SPTLC1P3-201ENST00000403408 UQCRQO14949 82 aa4.32□□□□□ -1.72
SPTLC1P3-201ENST00000403408 ATOX1O00244 68 aa4.3□□□□□ -1.72
SPTLC1P3-201ENST00000403408 MT1GP13640 62 aa4.3□□□□□ -1.72
SPTLC1P3-201ENST00000403408 MT1MQ8N339 61 aa4.29□□□□□ -1.72
SPTLC1P3-201ENST00000403408 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SPTLC1P3-201ENST00000403408 MT-ATP8P03928 68 aa4.26□□□□□ -1.73
SPTLC1P3-201ENST00000403408 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
SPTLC1P3-201ENST00000403408 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
SPTLC1P3-201ENST00000403408 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
SPTLC1P3-201ENST00000403408 DMAC1Q96GE9 116 aa4.21□□□□□ -1.74
SPTLC1P3-201ENST00000403408 MT1LQ93083 61 aa4.2□□□□□ -1.74
SPTLC1P3-201ENST00000403408 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
SPTLC1P3-201ENST00000403408 SMIM6P0DI80 62 aa4.19□□□□□ -1.74
SPTLC1P3-201ENST00000403408 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
SPTLC1P3-201ENST00000403408 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
SPTLC1P3-201ENST00000403408 HIST1H4AP62805 103 aaKnown RBP4.16□□□□□ -1.74
SPTLC1P3-201ENST00000403408 ETDBQ3ZM63 59 aa4.16□□□□□ -1.74
SPTLC1P3-201ENST00000403408 OCR1Q9BZK8 76 aa4.14□□□□□ -1.75
SPTLC1P3-201ENST00000403408 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
SPTLC1P3-201ENST00000403408 A0A0D9SG42 100 aa4.12□□□□□ -1.75
SPTLC1P3-201ENST00000403408 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
SPTLC1P3-201ENST00000403408 MP68P56378 58 aa4.09□□□□□ -1.75
SPTLC1P3-201ENST00000403408 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
SPTLC1P3-201ENST00000403408 TRAV7A0A075B6U4 112 aa4.05□□□□□ -1.76
SPTLC1P3-201ENST00000403408 F8W1H4 67 aa4.05□□□□□ -1.76
SPTLC1P3-201ENST00000403408 COL5A1-AS1Q5SY13 56 aa4.04□□□□□ -1.76
SPTLC1P3-201ENST00000403408 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
SPTLC1P3-201ENST00000403408 LCE1EQ5T753 118 aa4□□□□□ -1.77
SPTLC1P3-201ENST00000403408 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
SPTLC1P3-201ENST00000403408 FAM240AA0A1B0GVK7 77 aa3.99□□□□□ -1.77
SPTLC1P3-201ENST00000403408 H3BPC8 53 aa3.98□□□□□ -1.77
SPTLC1P3-201ENST00000403408 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
SPTLC1P3-201ENST00000403408 GTF2H5Q6ZYL4 71 aa3.97□□□□□ -1.77
SPTLC1P3-201ENST00000403408 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
SPTLC1P3-201ENST00000403408 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
SPTLC1P3-201ENST00000403408 ACYP2P14621 99 aa3.95□□□□□ -1.78
SPTLC1P3-201ENST00000403408 LOC105371267A0A1B0GV96 52 aa3.93□□□□□ -1.78
SPTLC1P3-201ENST00000403408 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
SPTLC1P3-201ENST00000403408 LINC00643Q86TS7 51 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms