RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
PDGFA-203ENST00000402802 H0YAA0 97 aa8.83□□□□□ -1
PDGFA-203ENST00000402802 SPINK1P00995 79 aa8.82□□□□□ -1
PDGFA-203ENST00000402802 Q8N1X5 172 aa8.8□□□□□ -1
PDGFA-203ENST00000402802 P0C880 135 aa8.78□□□□□ -1
PDGFA-203ENST00000402802 J3QL48 77 aa8.77□□□□□ -1.01
PDGFA-203ENST00000402802 LCE2BO14633 110 aa8.77□□□□□ -1.01
PDGFA-203ENST00000402802 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
PDGFA-203ENST00000402802 A0A1B0GU33 70 aa8.71□□□□□ -1.01
PDGFA-203ENST00000402802 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
PDGFA-203ENST00000402802 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.02
PDGFA-203ENST00000402802 RPS29P62273 56 aaKnown RBP8.68□□□□□ -1.02
PDGFA-203ENST00000402802 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
PDGFA-203ENST00000402802 BIRC6Q9NR09 4857 aa8.66□□□□□ -1.02
PDGFA-203ENST00000402802 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.03
PDGFA-203ENST00000402802 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
PDGFA-203ENST00000402802 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
PDGFA-203ENST00000402802 K7ERS5 55 aa8.6□□□□□ -1.03
PDGFA-203ENST00000402802 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
PDGFA-203ENST00000402802 HERC2O95714 4834 aa8.58□□□□□ -1.04
PDGFA-203ENST00000402802 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
PDGFA-203ENST00000402802 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
PDGFA-203ENST00000402802 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
PDGFA-203ENST00000402802 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
PDGFA-203ENST00000402802 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
PDGFA-203ENST00000402802 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.07
PDGFA-203ENST00000402802 LPAP08519 4548 aa8.38□□□□□ -1.07
PDGFA-203ENST00000402802 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
PDGFA-203ENST00000402802 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
PDGFA-203ENST00000402802 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
PDGFA-203ENST00000402802 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
PDGFA-203ENST00000402802 XP32Q5T750 250 aa8.3□□□□□ -1.08
PDGFA-203ENST00000402802 LRP2P98164 4655 aa8.29□□□□□ -1.08
PDGFA-203ENST00000402802 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
PDGFA-203ENST00000402802 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.09
PDGFA-203ENST00000402802 HERC1Q15751 4861 aa8.21□□□□□ -1.09
PDGFA-203ENST00000402802 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
PDGFA-203ENST00000402802 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
PDGFA-203ENST00000402802 A0A0D9SG42 100 aa8.17□□□□□ -1.1
PDGFA-203ENST00000402802 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
PDGFA-203ENST00000402802 S4R3F8 94 aa8.06□□□□□ -1.12
PDGFA-203ENST00000402802 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
PDGFA-203ENST00000402802 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
PDGFA-203ENST00000402802 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
PDGFA-203ENST00000402802 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
PDGFA-203ENST00000402802 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
PDGFA-203ENST00000402802 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
PDGFA-203ENST00000402802 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
PDGFA-203ENST00000402802 MUC2Q02817 5179 aa7.9□□□□□ -1.15
PDGFA-203ENST00000402802 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
PDGFA-203ENST00000402802 M0QZ58 72 aa7.75□□□□□ -1.17
PDGFA-203ENST00000402802 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
PDGFA-203ENST00000402802 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
PDGFA-203ENST00000402802 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
PDGFA-203ENST00000402802 KRTAP19-2Q3LHN2 52 aa7.63□□□□□ -1.19
PDGFA-203ENST00000402802 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
PDGFA-203ENST00000402802 FLGP20930 4061 aaPredicted RBP7.51□□□□□ -1.21
PDGFA-203ENST00000402802 R4GN34 69 aa7.39□□□□□ -1.23
PDGFA-203ENST00000402802 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
PDGFA-203ENST00000402802 MT1HP80294 61 aa7.28□□□□□ -1.24
PDGFA-203ENST00000402802 M0R2T5 61 aa7.24□□□□□ -1.25
PDGFA-203ENST00000402802 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
PDGFA-203ENST00000402802 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
PDGFA-203ENST00000402802 MT2AP02795 61 aa7.01□□□□□ -1.29
PDGFA-203ENST00000402802 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
PDGFA-203ENST00000402802 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
PDGFA-203ENST00000402802 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
PDGFA-203ENST00000402802 MT1FP04733 61 aa7□□□□□ -1.29
PDGFA-203ENST00000402802 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
PDGFA-203ENST00000402802 TNP1P09430 55 aa6.91□□□□□ -1.3
PDGFA-203ENST00000402802 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
PDGFA-203ENST00000402802 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
PDGFA-203ENST00000402802 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
PDGFA-203ENST00000402802 INE1O15225 51 aa6.72□□□□□ -1.33
PDGFA-203ENST00000402802 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
PDGFA-203ENST00000402802 KRTAP4-6Q9BYQ5 205 aa6.68□□□□□ -1.34
PDGFA-203ENST00000402802 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
PDGFA-203ENST00000402802 MT1BP07438 61 aa6.61□□□□□ -1.35
PDGFA-203ENST00000402802 USH2AO75445 5202 aa6.59□□□□□ -1.35
PDGFA-203ENST00000402802 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
PDGFA-203ENST00000402802 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
PDGFA-203ENST00000402802 MT1XP80297 61 aa6.41□□□□□ -1.38
PDGFA-203ENST00000402802 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
PDGFA-203ENST00000402802 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
PDGFA-203ENST00000402802 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
PDGFA-203ENST00000402802 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
PDGFA-203ENST00000402802 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
PDGFA-203ENST00000402802 KMT2DO14686 5537 aa6.15□□□□□ -1.43
PDGFA-203ENST00000402802 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
PDGFA-203ENST00000402802 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
PDGFA-203ENST00000402802 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
PDGFA-203ENST00000402802 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
PDGFA-203ENST00000402802 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
PDGFA-203ENST00000402802 LCE3BQ5TA77 95 aa6□□□□□ -1.45
PDGFA-203ENST00000402802 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
PDGFA-203ENST00000402802 KRTAP9-9Q9BYP9 154 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms