RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 H1FX-AS1Q4G0G2 97 aa12.82□□□□□ -0.36
CPNE1-205ENST00000401607 PRR15LQ9BU68 103 aa12.82□□□□□ -0.36
CPNE1-205ENST00000401607 SPTSSBQ8NFR3 76 aa12.81□□□□□ -0.36
CPNE1-205ENST00000401607 LCA10Q71F78 164 aa12.78□□□□□ -0.36
CPNE1-205ENST00000401607 Q5VV11 94 aa12.76□□□□□ -0.37
CPNE1-205ENST00000401607 KRTAP3-3Q9BYR6 98 aa12.76□□□□□ -0.37
CPNE1-205ENST00000401607 S4R3F8 94 aa12.76□□□□□ -0.37
CPNE1-205ENST00000401607 A0A1B0GU69 56 aa12.66□□□□□ -0.38
CPNE1-205ENST00000401607 KRTAP19-2Q3LHN2 52 aa12.66□□□□□ -0.38
CPNE1-205ENST00000401607 MUC2Q02817 5179 aa12.55□□□□□ -0.4
CPNE1-205ENST00000401607 SEC61GP60059 68 aa12.5□□□□□ -0.41
CPNE1-205ENST00000401607 CSAG1Q6PB30 78 aa12.44□□□□□ -0.42
CPNE1-205ENST00000401607 A6NED7 52 aa12.43□□□□□ -0.42
CPNE1-205ENST00000401607 UBR4Q5T4S7 5183 aa12.41□□□□□ -0.42
CPNE1-205ENST00000401607 BRK1Q8WUW1 75 aa12.4□□□□□ -0.42
CPNE1-205ENST00000401607 RNF213Q63HN8 5207 aa12.38□□□□□ -0.43
CPNE1-205ENST00000401607 KRTAP3-2Q9BYR7 98 aa12.34□□□□□ -0.43
CPNE1-205ENST00000401607 KRTAP10-6P60371 365 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-205ENST00000401607 A8MU10 97 aa12.3□□□□□ -0.44
CPNE1-205ENST00000401607 LCE2CQ5TA81 110 aa12.3□□□□□ -0.44
CPNE1-205ENST00000401607 UQCR11O14957 56 aa12.28□□□□□ -0.44
CPNE1-205ENST00000401607 FLGP20930 4061 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-205ENST00000401607 A0A1B0GU33 70 aa12.24□□□□□ -0.45
CPNE1-205ENST00000401607 CDC42SE1Q9NRR8 79 aa12.24□□□□□ -0.45
CPNE1-205ENST00000401607 ADM2Q7Z4H4 148 aa12.23□□□□□ -0.45
CPNE1-205ENST00000401607 P0C880 135 aa12.21□□□□□ -0.45
CPNE1-205ENST00000401607 H0YAA0 97 aa12.2□□□□□ -0.46
CPNE1-205ENST00000401607 SPATA8Q6RVD6 105 aa12.18□□□□□ -0.46
CPNE1-205ENST00000401607 MIR22HGQ0VDD5 57 aa12.18□□□□□ -0.46
CPNE1-205ENST00000401607 PRO0628Q9UI54 55 aa12.17□□□□□ -0.46
CPNE1-205ENST00000401607 FAT4Q6V0I7 4981 aa12.07□□□□□ -0.48
CPNE1-205ENST00000401607 KRTAP13-4Q3LI77 160 aa12.03□□□□□ -0.48
CPNE1-205ENST00000401607 MT1HP80294 61 aa12.02□□□□□ -0.48
CPNE1-205ENST00000401607 LORP23490 312 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-205ENST00000401607 M0R2T5 61 aa11.85□□□□□ -0.51
CPNE1-205ENST00000401607 M0QZ58 72 aa11.84□□□□□ -0.51
CPNE1-205ENST00000401607 A0A0D9SG42 100 aa11.77□□□□□ -0.53
CPNE1-205ENST00000401607 R4GN34 69 aa11.75□□□□□ -0.53
CPNE1-205ENST00000401607 PMAIP1Q13794 54 aa11.7□□□□□ -0.54
CPNE1-205ENST00000401607 A6NN06 94 aa11.67□□□□□ -0.54
CPNE1-205ENST00000401607 KRTAP9-8Q9BYQ0 159 aa11.61□□□□□ -0.55
CPNE1-205ENST00000401607 CRIPTQ9P021 101 aa11.59□□□□□ -0.55
CPNE1-205ENST00000401607 MT2AP02795 61 aa11.58□□□□□ -0.56
CPNE1-205ENST00000401607 LINC01554Q52M75 96 aa11.57□□□□□ -0.56
CPNE1-205ENST00000401607 KRTAP12-1P59990 96 aa11.55□□□□□ -0.56
CPNE1-205ENST00000401607 KRTAP12-2P59991 146 aa11.54□□□□□ -0.56
CPNE1-205ENST00000401607 K7ERS5 55 aa11.53□□□□□ -0.56
CPNE1-205ENST00000401607 MT1FP04733 61 aa11.53□□□□□ -0.56
CPNE1-205ENST00000401607 SPINT4Q6UDR6 99 aa11.47□□□□□ -0.57
CPNE1-205ENST00000401607 LCE2AQ5TA79 106 aaPredicted RBP11.46□□□□□ -0.58
CPNE1-205ENST00000401607 KRTAP10-10P60014 251 aa11.44□□□□□ -0.58
CPNE1-205ENST00000401607 SVIPQ8NHG7 77 aa11.39□□□□□ -0.59
CPNE1-205ENST00000401607 SPRR2GQ9BYE4 73 aa11.39□□□□□ -0.59
CPNE1-205ENST00000401607 KRTAP19-1Q8IUB9 90 aa11.37□□□□□ -0.59
CPNE1-205ENST00000401607 KTN1-AS1Q86SY8 53 aa11.26□□□□□ -0.61
CPNE1-205ENST00000401607 KRTAP9-3Q9BYQ3 159 aa11.17□□□□□ -0.62
CPNE1-205ENST00000401607 ROMO1P60602 79 aa11.14□□□□□ -0.63
CPNE1-205ENST00000401607 KRTAP19-8Q3LI54 63 aa11.07□□□□□ -0.64
CPNE1-205ENST00000401607 PRAC1Q96KF2 57 aa11.03□□□□□ -0.64
CPNE1-205ENST00000401607 CAMK2N1Q7Z7J9 78 aa11.02□□□□□ -0.65
CPNE1-205ENST00000401607 PLAC4Q8WY50 150 aa10.98□□□□□ -0.65
CPNE1-205ENST00000401607 MT1BP07438 61 aa10.95□□□□□ -0.66
CPNE1-205ENST00000401607 C10orf95Q9H7T3 257 aa10.94□□□□□ -0.66
CPNE1-205ENST00000401607 LCE2BO14633 110 aa10.86□□□□□ -0.67
CPNE1-205ENST00000401607 KRTAP25-1Q3LHN0 102 aa10.7□□□□□ -0.7
CPNE1-205ENST00000401607 MT1XP80297 61 aa10.62□□□□□ -0.71
CPNE1-205ENST00000401607 KRTAP10-5P60370 271 aa10.6□□□□□ -0.71
CPNE1-205ENST00000401607 USH2AO75445 5202 aa10.53□□□□□ -0.72
CPNE1-205ENST00000401607 TNP1P09430 55 aa10.51□□□□□ -0.73
CPNE1-205ENST00000401607 PRO2289Q9P1D8 64 aa10.39□□□□□ -0.75
CPNE1-205ENST00000401607 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-205ENST00000401607 PP632Q6XCG6 107 aa10.24□□□□□ -0.77
CPNE1-205ENST00000401607 KRTAP23-1A1A580 65 aa10.21□□□□□ -0.78
CPNE1-205ENST00000401607 KRTAP10-7P60409 375 aaPredicted RBP10.21□□□□□ -0.78
CPNE1-205ENST00000401607 SSPOA2VEC9 5147 aa10.18□□□□□ -0.78
CPNE1-205ENST00000401607 KRTAP19-6Q3LI70 58 aa10.13□□□□□ -0.79
CPNE1-205ENST00000401607 LCE3AQ5TA76 89 aa10.11□□□□□ -0.79
CPNE1-205ENST00000401607 KRTAP10-12P60413 245 aa10.07□□□□□ -0.8
CPNE1-205ENST00000401607 FSIP2Q5CZC0 6907 aa9.99□□□□□ -0.81
CPNE1-205ENST00000401607 KRTAP8-1Q8IUC2 63 aa9.88□□□□□ -0.83
CPNE1-205ENST00000401607 KRTAP9-2Q9BYQ4 174 aa9.86□□□□□ -0.83
CPNE1-205ENST00000401607 KRTAP4-8A0A0G2JLE6 195 aa9.78□□□□□ -0.84
CPNE1-205ENST00000401607 KRTAP4-8Q9BYQ9 185 aa9.78□□□□□ -0.84
CPNE1-205ENST00000401607 KMT2DO14686 5537 aa9.73□□□□□ -0.85
CPNE1-205ENST00000401607 FCGBPQ9Y6R7 5405 aaPredicted RBP9.7□□□□□ -0.86
CPNE1-205ENST00000401607 KRTAP12-3P60328 96 aa9.67□□□□□ -0.86
CPNE1-205ENST00000401607 KRTAP19-5Q3LI72 72 aa9.61□□□□□ -0.87
CPNE1-205ENST00000401607 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.88
CPNE1-205ENST00000401607 KRTAP15-1Q3LI76 137 aa9.51□□□□□ -0.89
CPNE1-205ENST00000401607 KRTAP19-7Q3SYF9 63 aa9.47□□□□□ -0.89
CPNE1-205ENST00000401607 MT1EP04732 61 aa9.29□□□□□ -0.92
CPNE1-205ENST00000401607 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.93
CPNE1-205ENST00000401607 SPRR5A0A1B0GTR4 108 aa9.19□□□□□ -0.94
CPNE1-205ENST00000401607 MT1LQ93083 61 aa9.12□□□□□ -0.95
CPNE1-205ENST00000401607 LCE3CQ5T5A8 94 aa9.04□□□□□ -0.96
CPNE1-205ENST00000401607 KRTAP9-6A0A140TA67 174 aa9.01□□□□□ -0.97
CPNE1-205ENST00000401607 SPRR2FQ96RM1 72 aa9□□□□□ -0.97
CPNE1-205ENST00000401607 KRTAP19-4Q3LI73 84 aa8.94□□□□□ -0.98
CPNE1-205ENST00000401607 MUC12Q9UKN1 5478 aa8.94□□□□□ -0.98
CPNE1-205ENST00000401607 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms