RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
USP16-204ENST00000399976 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
USP16-204ENST00000399976 TRAV22A0A0B4J277 110 aa3.86□□□□□ -1.79
USP16-204ENST00000399976 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
USP16-204ENST00000399976 MP68P56378 58 aa3.84□□□□□ -1.79
USP16-204ENST00000399976 C7orf65Q6ZTY9 151 aa3.84□□□□□ -1.79
USP16-204ENST00000399976 SPINK7P58062 85 aa3.83□□□□□ -1.8
USP16-204ENST00000399976 LOC101927531A0A1B0GV80 90 aa3.81□□□□□ -1.8
USP16-204ENST00000399976 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
USP16-204ENST00000399976 Q5W150 140 aa3.81□□□□□ -1.8
USP16-204ENST00000399976 MT1HP80294 61 aa3.81□□□□□ -1.8
USP16-204ENST00000399976 NDUFS5O43920 106 aa3.8□□□□□ -1.8
USP16-204ENST00000399976 Q5VV11 94 aa3.79□□□□□ -1.8
USP16-204ENST00000399976 LCE2BO14633 110 aa3.79□□□□□ -1.8
USP16-204ENST00000399976 LINC00208Q96KT6 92 aa3.79□□□□□ -1.8
USP16-204ENST00000399976 H0Y9P7 68 aa3.78□□□□□ -1.81
USP16-204ENST00000399976 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
USP16-204ENST00000399976 A8MU10 97 aa3.75□□□□□ -1.81
USP16-204ENST00000399976 A8MUN3 132 aa3.75□□□□□ -1.81
USP16-204ENST00000399976 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
USP16-204ENST00000399976 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
USP16-204ENST00000399976 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
USP16-204ENST00000399976 PSPHP1O15172 72 aa3.74□□□□□ -1.81
USP16-204ENST00000399976 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
USP16-204ENST00000399976 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
USP16-204ENST00000399976 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
USP16-204ENST00000399976 LORP23490 312 aaPredicted RBP3.73□□□□□ -1.81
USP16-204ENST00000399976 COA5Q86WW8 74 aa3.72□□□□□ -1.81
USP16-204ENST00000399976 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
USP16-204ENST00000399976 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
USP16-204ENST00000399976 IGKV2D-30A0A075B6S6 120 aa3.71□□□□□ -1.82
USP16-204ENST00000399976 A6NN06 94 aa3.7□□□□□ -1.82
USP16-204ENST00000399976 MUC2Q02817 5179 aa3.69□□□□□ -1.82
USP16-204ENST00000399976 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
USP16-204ENST00000399976 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
USP16-204ENST00000399976 CHKB-CPT1BH3BT56 60 aa3.69□□□□□ -1.82
USP16-204ENST00000399976 LCA10Q71F78 164 aa3.69□□□□□ -1.82
USP16-204ENST00000399976 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
USP16-204ENST00000399976 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
USP16-204ENST00000399976 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
USP16-204ENST00000399976 SPTSSBQ8NFR3 76 aa3.67□□□□□ -1.82
USP16-204ENST00000399976 KRTAP3-1Q9BYR8 98 aa3.65□□□□□ -1.82
USP16-204ENST00000399976 A6NED7 52 aa3.63□□□□□ -1.83
USP16-204ENST00000399976 M0R2T5 61 aa3.63□□□□□ -1.83
USP16-204ENST00000399976 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
USP16-204ENST00000399976 H0YAA0 97 aa3.62□□□□□ -1.83
USP16-204ENST00000399976 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
USP16-204ENST00000399976 S4R3F8 94 aa3.62□□□□□ -1.83
USP16-204ENST00000399976 ACYP2P14621 99 aa3.6□□□□□ -1.83
USP16-204ENST00000399976 MT2AP02795 61 aa3.59□□□□□ -1.84
USP16-204ENST00000399976 CSAG1Q6PB30 78 aa3.58□□□□□ -1.84
USP16-204ENST00000399976 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
USP16-204ENST00000399976 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
USP16-204ENST00000399976 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
USP16-204ENST00000399976 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
USP16-204ENST00000399976 CRIPTQ9P021 101 aa3.56□□□□□ -1.84
USP16-204ENST00000399976 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
USP16-204ENST00000399976 MT1FP04733 61 aa3.54□□□□□ -1.84
USP16-204ENST00000399976 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
USP16-204ENST00000399976 ADM2Q7Z4H4 148 aa3.51□□□□□ -1.85
USP16-204ENST00000399976 A0A1B0GU69 56 aa3.49□□□□□ -1.85
USP16-204ENST00000399976 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
USP16-204ENST00000399976 UQCR11O14957 56 aa3.48□□□□□ -1.85
USP16-204ENST00000399976 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
USP16-204ENST00000399976 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
USP16-204ENST00000399976 KRTAP19-8Q3LI54 63 aa3.45□□□□□ -1.86
USP16-204ENST00000399976 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
USP16-204ENST00000399976 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
USP16-204ENST00000399976 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
USP16-204ENST00000399976 M0QZ58 72 aa3.34□□□□□ -1.87
USP16-204ENST00000399976 MT1BP07438 61 aa3.33□□□□□ -1.88
USP16-204ENST00000399976 ROMO1P60602 79 aa3.32□□□□□ -1.88
USP16-204ENST00000399976 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
USP16-204ENST00000399976 P0C880 135 aa3.29□□□□□ -1.88
USP16-204ENST00000399976 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
USP16-204ENST00000399976 R4GN34 69 aa3.29□□□□□ -1.88
USP16-204ENST00000399976 A0A1B0GU33 70 aa3.28□□□□□ -1.88
USP16-204ENST00000399976 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
USP16-204ENST00000399976 USH2AO75445 5202 aa3.25□□□□□ -1.89
USP16-204ENST00000399976 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
USP16-204ENST00000399976 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
USP16-204ENST00000399976 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
USP16-204ENST00000399976 K7ERS5 55 aa3.21□□□□□ -1.89
USP16-204ENST00000399976 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
USP16-204ENST00000399976 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
USP16-204ENST00000399976 MT1XP80297 61 aa3.16□□□□□ -1.9
USP16-204ENST00000399976 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
USP16-204ENST00000399976 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
USP16-204ENST00000399976 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
USP16-204ENST00000399976 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
USP16-204ENST00000399976 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
USP16-204ENST00000399976 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
USP16-204ENST00000399976 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
USP16-204ENST00000399976 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
USP16-204ENST00000399976 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
USP16-204ENST00000399976 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
USP16-204ENST00000399976 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
USP16-204ENST00000399976 A0A0D9SG42 100 aa2.97□□□□□ -1.93
USP16-204ENST00000399976 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
USP16-204ENST00000399976 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms