RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 C5orf47Q569G3 176 aa4.63□□□□□ -1.67
BRCC3-206ENST00000399042 C1orf64Q8NEQ6 169 aa4.63□□□□□ -1.67
BRCC3-206ENST00000399042 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
BRCC3-206ENST00000399042 MUC2Q02817 5179 aa4.62□□□□□ -1.67
BRCC3-206ENST00000399042 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
BRCC3-206ENST00000399042 LOC101927531A0A1B0GV80 90 aa4.62□□□□□ -1.67
BRCC3-206ENST00000399042 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
BRCC3-206ENST00000399042 H3BPC8 53 aa4.58□□□□□ -1.68
BRCC3-206ENST00000399042 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
BRCC3-206ENST00000399042 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
BRCC3-206ENST00000399042 SERP2Q8N6R1 65 aa4.57□□□□□ -1.68
BRCC3-206ENST00000399042 HRES1P13985 223 aa4.56□□□□□ -1.68
BRCC3-206ENST00000399042 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
BRCC3-206ENST00000399042 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
BRCC3-206ENST00000399042 C20orf197Q8N268 126 aa4.53□□□□□ -1.68
BRCC3-206ENST00000399042 SEC61GP60059 68 aa4.52□□□□□ -1.69
BRCC3-206ENST00000399042 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
BRCC3-206ENST00000399042 M0R2T5 61 aa4.51□□□□□ -1.69
BRCC3-206ENST00000399042 COX7CP15954 63 aa4.5□□□□□ -1.69
BRCC3-206ENST00000399042 KLKP1Q107X0 134 aa4.49□□□□□ -1.69
BRCC3-206ENST00000399042 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
BRCC3-206ENST00000399042 H1FX-AS1Q4G0G2 97 aa4.48□□□□□ -1.69
BRCC3-206ENST00000399042 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
BRCC3-206ENST00000399042 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
BRCC3-206ENST00000399042 A8MUN3 132 aa4.43□□□□□ -1.7
BRCC3-206ENST00000399042 NDUFC1O43677 76 aa4.43□□□□□ -1.7
BRCC3-206ENST00000399042 S4R3F8 94 aa4.42□□□□□ -1.7
BRCC3-206ENST00000399042 MT1HP80294 61 aa4.41□□□□□ -1.7
BRCC3-206ENST00000399042 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
BRCC3-206ENST00000399042 ACYP2P14621 99 aa4.39□□□□□ -1.71
BRCC3-206ENST00000399042 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
BRCC3-206ENST00000399042 SPANXA2-OT1Q8N9U9 137 aa4.37□□□□□ -1.71
BRCC3-206ENST00000399042 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
BRCC3-206ENST00000399042 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
BRCC3-206ENST00000399042 LCA10Q71F78 164 aa4.35□□□□□ -1.71
BRCC3-206ENST00000399042 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
BRCC3-206ENST00000399042 H7BZZ5 65 aa4.34□□□□□ -1.71
BRCC3-206ENST00000399042 CYSTM1Q9H1C7 97 aa4.33□□□□□ -1.72
BRCC3-206ENST00000399042 SPTSSBQ8NFR3 76 aa4.32□□□□□ -1.72
BRCC3-206ENST00000399042 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
BRCC3-206ENST00000399042 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
BRCC3-206ENST00000399042 TMEM258P61165 79 aa4.27□□□□□ -1.73
BRCC3-206ENST00000399042 COA5Q86WW8 74 aa4.27□□□□□ -1.73
BRCC3-206ENST00000399042 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
BRCC3-206ENST00000399042 V9GYY9 64 aa4.23□□□□□ -1.73
BRCC3-206ENST00000399042 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
BRCC3-206ENST00000399042 MT2AP02795 61 aa4.18□□□□□ -1.74
BRCC3-206ENST00000399042 H0YAA0 97 aa4.15□□□□□ -1.75
BRCC3-206ENST00000399042 MT1FP04733 61 aa4.15□□□□□ -1.75
BRCC3-206ENST00000399042 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
BRCC3-206ENST00000399042 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
BRCC3-206ENST00000399042 CRIPTQ9P021 101 aa4.1□□□□□ -1.75
BRCC3-206ENST00000399042 A0A1B0GU69 56 aa4.09□□□□□ -1.75
BRCC3-206ENST00000399042 R4GN34 69 aa4.09□□□□□ -1.75
BRCC3-206ENST00000399042 P0C880 135 aa4.08□□□□□ -1.76
BRCC3-206ENST00000399042 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
BRCC3-206ENST00000399042 M0QZ58 72 aa4.06□□□□□ -1.76
BRCC3-206ENST00000399042 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
BRCC3-206ENST00000399042 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
BRCC3-206ENST00000399042 A0A1B0GU33 70 aa4.01□□□□□ -1.77
BRCC3-206ENST00000399042 LINC01558Q9Y6Z2 57 aa4.01□□□□□ -1.77
BRCC3-206ENST00000399042 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
BRCC3-206ENST00000399042 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
BRCC3-206ENST00000399042 Q5VV11 94 aa3.98□□□□□ -1.77
BRCC3-206ENST00000399042 PSPHP1O15172 72 aa3.95□□□□□ -1.78
BRCC3-206ENST00000399042 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
BRCC3-206ENST00000399042 A0A0D9SG42 100 aa3.94□□□□□ -1.78
BRCC3-206ENST00000399042 Q1T7F1 81 aa3.94□□□□□ -1.78
BRCC3-206ENST00000399042 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
BRCC3-206ENST00000399042 USH2AO75445 5202 aa3.93□□□□□ -1.78
BRCC3-206ENST00000399042 UQCR11O14957 56 aa3.91□□□□□ -1.78
BRCC3-206ENST00000399042 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.79
BRCC3-206ENST00000399042 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.79
BRCC3-206ENST00000399042 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
BRCC3-206ENST00000399042 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
BRCC3-206ENST00000399042 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
BRCC3-206ENST00000399042 A6NED7 52 aa3.86□□□□□ -1.79
BRCC3-206ENST00000399042 MT1BP07438 61 aa3.86□□□□□ -1.79
BRCC3-206ENST00000399042 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
BRCC3-206ENST00000399042 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
BRCC3-206ENST00000399042 A8MU10 97 aa3.84□□□□□ -1.79
BRCC3-206ENST00000399042 A6NN06 94 aa3.83□□□□□ -1.8
BRCC3-206ENST00000399042 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
BRCC3-206ENST00000399042 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
BRCC3-206ENST00000399042 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
BRCC3-206ENST00000399042 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
BRCC3-206ENST00000399042 K7ERS5 55 aa3.8□□□□□ -1.8
BRCC3-206ENST00000399042 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
BRCC3-206ENST00000399042 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
BRCC3-206ENST00000399042 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
BRCC3-206ENST00000399042 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
BRCC3-206ENST00000399042 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
BRCC3-206ENST00000399042 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
BRCC3-206ENST00000399042 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
BRCC3-206ENST00000399042 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
BRCC3-206ENST00000399042 MT1XP80297 61 aa3.7□□□□□ -1.82
BRCC3-206ENST00000399042 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
BRCC3-206ENST00000399042 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
BRCC3-206ENST00000399042 MT3P25713 68 aa3.64□□□□□ -1.83
BRCC3-206ENST00000399042 TNP1P09430 55 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms