RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
SEC13-209ENST00000397117 V9GYY9 64 aa6.82□□□□□ -1.32
SEC13-209ENST00000397117 HRES1P13985 223 aa6.8□□□□□ -1.32
SEC13-209ENST00000397117 Q1T7F1 81 aa6.8□□□□□ -1.32
SEC13-209ENST00000397117 FLGP20930 4061 aaPredicted RBP6.77□□□□□ -1.33
SEC13-209ENST00000397117 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
SEC13-209ENST00000397117 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
SEC13-209ENST00000397117 M0R2T5 61 aa6.73□□□□□ -1.33
SEC13-209ENST00000397117 COX6B2Q6YFQ2 88 aa6.7□□□□□ -1.34
SEC13-209ENST00000397117 COA5Q86WW8 74 aa6.7□□□□□ -1.34
SEC13-209ENST00000397117 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
SEC13-209ENST00000397117 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
SEC13-209ENST00000397117 A8MUN3 132 aa6.68□□□□□ -1.34
SEC13-209ENST00000397117 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
SEC13-209ENST00000397117 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
SEC13-209ENST00000397117 ACYP2P14621 99 aa6.65□□□□□ -1.34
SEC13-209ENST00000397117 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
SEC13-209ENST00000397117 Q5VV11 94 aa6.61□□□□□ -1.35
SEC13-209ENST00000397117 PSPHP1O15172 72 aa6.6□□□□□ -1.35
SEC13-209ENST00000397117 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
SEC13-209ENST00000397117 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
SEC13-209ENST00000397117 USH2AO75445 5202 aa6.59□□□□□ -1.35
SEC13-209ENST00000397117 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
SEC13-209ENST00000397117 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
SEC13-209ENST00000397117 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
SEC13-209ENST00000397117 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
SEC13-209ENST00000397117 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
SEC13-209ENST00000397117 S4R3F8 94 aa6.53□□□□□ -1.36
SEC13-209ENST00000397117 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
SEC13-209ENST00000397117 LCA10Q71F78 164 aa6.48□□□□□ -1.37
SEC13-209ENST00000397117 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
SEC13-209ENST00000397117 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
SEC13-209ENST00000397117 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
SEC13-209ENST00000397117 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
SEC13-209ENST00000397117 A6NED7 52 aa6.39□□□□□ -1.39
SEC13-209ENST00000397117 A8MU10 97 aa6.39□□□□□ -1.39
SEC13-209ENST00000397117 LCE2BO14633 110 aa6.39□□□□□ -1.39
SEC13-209ENST00000397117 MT2AP02795 61 aa6.39□□□□□ -1.39
SEC13-209ENST00000397117 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
SEC13-209ENST00000397117 A0A1B0GU69 56 aa6.36□□□□□ -1.39
SEC13-209ENST00000397117 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
SEC13-209ENST00000397117 MT1FP04733 61 aa6.33□□□□□ -1.4
SEC13-209ENST00000397117 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
SEC13-209ENST00000397117 SEC61GP60059 68 aa6.31□□□□□ -1.4
SEC13-209ENST00000397117 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
SEC13-209ENST00000397117 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
SEC13-209ENST00000397117 UQCR11O14957 56 aa6.25□□□□□ -1.41
SEC13-209ENST00000397117 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
SEC13-209ENST00000397117 A6NN06 94 aa6.24□□□□□ -1.41
SEC13-209ENST00000397117 H0YAA0 97 aa6.22□□□□□ -1.41
SEC13-209ENST00000397117 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
SEC13-209ENST00000397117 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
SEC13-209ENST00000397117 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.41
SEC13-209ENST00000397117 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
SEC13-209ENST00000397117 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
SEC13-209ENST00000397117 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
SEC13-209ENST00000397117 KTN1-AS1Q86SY8 53 aa6.14□□□□□ -1.43
SEC13-209ENST00000397117 P0C880 135 aa6.13□□□□□ -1.43
SEC13-209ENST00000397117 A0A1B0GU33 70 aa6.07□□□□□ -1.44
SEC13-209ENST00000397117 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
SEC13-209ENST00000397117 R4GN34 69 aa6.03□□□□□ -1.44
SEC13-209ENST00000397117 NEBP20929 6669 aa6□□□□□ -1.45
SEC13-209ENST00000397117 M0QZ58 72 aa5.99□□□□□ -1.45
SEC13-209ENST00000397117 K7ERS5 55 aa5.95□□□□□ -1.46
SEC13-209ENST00000397117 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
SEC13-209ENST00000397117 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
SEC13-209ENST00000397117 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
SEC13-209ENST00000397117 A0A0D9SG42 100 aa5.88□□□□□ -1.47
SEC13-209ENST00000397117 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
SEC13-209ENST00000397117 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
SEC13-209ENST00000397117 KRTAP20-1Q3LI63 56 aa5.82□□□□□ -1.48
SEC13-209ENST00000397117 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
SEC13-209ENST00000397117 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
SEC13-209ENST00000397117 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
SEC13-209ENST00000397117 MT1BP07438 61 aa5.73□□□□□ -1.49
SEC13-209ENST00000397117 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
SEC13-209ENST00000397117 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
SEC13-209ENST00000397117 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
SEC13-209ENST00000397117 KMT2DO14686 5537 aa5.67□□□□□ -1.5
SEC13-209ENST00000397117 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
SEC13-209ENST00000397117 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
SEC13-209ENST00000397117 ROMO1P60602 79 aa5.66□□□□□ -1.5
SEC13-209ENST00000397117 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
SEC13-209ENST00000397117 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
SEC13-209ENST00000397117 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
SEC13-209ENST00000397117 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
SEC13-209ENST00000397117 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
SEC13-209ENST00000397117 MT1XP80297 61 aa5.47□□□□□ -1.53
SEC13-209ENST00000397117 SPRR2EP22531 72 aa5.43□□□□□ -1.54
SEC13-209ENST00000397117 SPRR2BP35325 72 aa5.43□□□□□ -1.54
SEC13-209ENST00000397117 SPRR2AP35326 72 aa5.43□□□□□ -1.54
SEC13-209ENST00000397117 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
SEC13-209ENST00000397117 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
SEC13-209ENST00000397117 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.55
SEC13-209ENST00000397117 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.55
SEC13-209ENST00000397117 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
SEC13-209ENST00000397117 TNP1P09430 55 aa5.33□□□□□ -1.56
SEC13-209ENST00000397117 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
SEC13-209ENST00000397117 SPRR2DP22532 72 aa5.26□□□□□ -1.57
SEC13-209ENST00000397117 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 345.3 ms