RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 LCE2BO14633 110 aa4.94□□□□□ -1.62
NUP98-205ENST00000397007 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
NUP98-205ENST00000397007 COX7CP15954 63 aa4.93□□□□□ -1.62
NUP98-205ENST00000397007 S4R3F8 94 aa4.93□□□□□ -1.62
NUP98-205ENST00000397007 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
NUP98-205ENST00000397007 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
NUP98-205ENST00000397007 M0R2T5 61 aa4.88□□□□□ -1.63
NUP98-205ENST00000397007 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
NUP98-205ENST00000397007 H7BZZ5 65 aa4.87□□□□□ -1.63
NUP98-205ENST00000397007 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
NUP98-205ENST00000397007 SNURFQ9Y675 71 aa4.85□□□□□ -1.63
NUP98-205ENST00000397007 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
NUP98-205ENST00000397007 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
NUP98-205ENST00000397007 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
NUP98-205ENST00000397007 NDUFC1O43677 76 aa4.79□□□□□ -1.64
NUP98-205ENST00000397007 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
NUP98-205ENST00000397007 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
NUP98-205ENST00000397007 MT1BP07438 61 aa4.77□□□□□ -1.65
NUP98-205ENST00000397007 ACYP2P14621 99 aa4.76□□□□□ -1.65
NUP98-205ENST00000397007 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
NUP98-205ENST00000397007 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
NUP98-205ENST00000397007 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
NUP98-205ENST00000397007 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
NUP98-205ENST00000397007 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
NUP98-205ENST00000397007 P0C880 135 aa4.68□□□□□ -1.66
NUP98-205ENST00000397007 COA5Q86WW8 74 aa4.67□□□□□ -1.66
NUP98-205ENST00000397007 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
NUP98-205ENST00000397007 ADM2Q7Z4H4 148 aa4.65□□□□□ -1.66
NUP98-205ENST00000397007 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
NUP98-205ENST00000397007 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
NUP98-205ENST00000397007 TMEM258P61165 79 aa4.6□□□□□ -1.67
NUP98-205ENST00000397007 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
NUP98-205ENST00000397007 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
NUP98-205ENST00000397007 SPTSSBQ8NFR3 76 aa4.57□□□□□ -1.68
NUP98-205ENST00000397007 Q5VV11 94 aa4.55□□□□□ -1.68
NUP98-205ENST00000397007 MT1XP80297 61 aa4.53□□□□□ -1.68
NUP98-205ENST00000397007 A6NN06 94 aa4.52□□□□□ -1.69
NUP98-205ENST00000397007 M0QZ58 72 aa4.49□□□□□ -1.69
NUP98-205ENST00000397007 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
NUP98-205ENST00000397007 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
NUP98-205ENST00000397007 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
NUP98-205ENST00000397007 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
NUP98-205ENST00000397007 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
NUP98-205ENST00000397007 R4GN34 69 aa4.43□□□□□ -1.7
NUP98-205ENST00000397007 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
NUP98-205ENST00000397007 PCP4P48539 62 aa4.4□□□□□ -1.71
NUP98-205ENST00000397007 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
NUP98-205ENST00000397007 Q1T7F1 81 aa4.37□□□□□ -1.71
NUP98-205ENST00000397007 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
NUP98-205ENST00000397007 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
NUP98-205ENST00000397007 A0A1B0GU33 70 aa4.34□□□□□ -1.72
NUP98-205ENST00000397007 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
NUP98-205ENST00000397007 A0A1B0GU69 56 aa4.31□□□□□ -1.72
NUP98-205ENST00000397007 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
NUP98-205ENST00000397007 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
NUP98-205ENST00000397007 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
NUP98-205ENST00000397007 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
NUP98-205ENST00000397007 KMT2DO14686 5537 aa4.27□□□□□ -1.73
NUP98-205ENST00000397007 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
NUP98-205ENST00000397007 SEC61GP60059 68 aa4.25□□□□□ -1.73
NUP98-205ENST00000397007 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
NUP98-205ENST00000397007 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
NUP98-205ENST00000397007 SMIM26A0A096LP01 95 aa4.23□□□□□ -1.73
NUP98-205ENST00000397007 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
NUP98-205ENST00000397007 A8MU10 97 aa4.21□□□□□ -1.74
NUP98-205ENST00000397007 V9GYY9 64 aa4.2□□□□□ -1.74
NUP98-205ENST00000397007 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
NUP98-205ENST00000397007 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
NUP98-205ENST00000397007 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
NUP98-205ENST00000397007 UQCR11O14957 56 aa4.15□□□□□ -1.75
NUP98-205ENST00000397007 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.75
NUP98-205ENST00000397007 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
NUP98-205ENST00000397007 A0A0D9SG42 100 aa4.11□□□□□ -1.75
NUP98-205ENST00000397007 NEBP20929 6669 aa4.1□□□□□ -1.75
NUP98-205ENST00000397007 PSPHP1O15172 72 aa4.08□□□□□ -1.76
NUP98-205ENST00000397007 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
NUP98-205ENST00000397007 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
NUP98-205ENST00000397007 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
NUP98-205ENST00000397007 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
NUP98-205ENST00000397007 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
NUP98-205ENST00000397007 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
NUP98-205ENST00000397007 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
NUP98-205ENST00000397007 MT1EP04732 61 aa3.98□□□□□ -1.77
NUP98-205ENST00000397007 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
NUP98-205ENST00000397007 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
NUP98-205ENST00000397007 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
NUP98-205ENST00000397007 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
NUP98-205ENST00000397007 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
NUP98-205ENST00000397007 A6NED7 52 aa3.9□□□□□ -1.79
NUP98-205ENST00000397007 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
NUP98-205ENST00000397007 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
NUP98-205ENST00000397007 TNP1P09430 55 aa3.87□□□□□ -1.79
NUP98-205ENST00000397007 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
NUP98-205ENST00000397007 SPRR2EP22531 72 aa3.83□□□□□ -1.8
NUP98-205ENST00000397007 SPRR2BP35325 72 aa3.83□□□□□ -1.8
NUP98-205ENST00000397007 SPRR2AP35326 72 aa3.83□□□□□ -1.8
NUP98-205ENST00000397007 MT1LQ93083 61 aa3.83□□□□□ -1.8
NUP98-205ENST00000397007 MT1GP13640 62 aa3.76□□□□□ -1.81
NUP98-205ENST00000397007 ROMO1P60602 79 aa3.76□□□□□ -1.81
NUP98-205ENST00000397007 K7ERS5 55 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms