RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 KLKP1Q107X0 134 aa5.23□□□□□ -1.57
NEDD8-202ENST00000396828 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
NEDD8-202ENST00000396828 PCP4P48539 62 aa5.22□□□□□ -1.57
NEDD8-202ENST00000396828 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
NEDD8-202ENST00000396828 NDUFC1O43677 76 aa5.2□□□□□ -1.58
NEDD8-202ENST00000396828 MT2AP02795 61 aa5.19□□□□□ -1.58
NEDD8-202ENST00000396828 MT1FP04733 61 aa5.16□□□□□ -1.58
NEDD8-202ENST00000396828 HRES1P13985 223 aa5.16□□□□□ -1.58
NEDD8-202ENST00000396828 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
NEDD8-202ENST00000396828 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
NEDD8-202ENST00000396828 H7BZZ5 65 aa5.13□□□□□ -1.59
NEDD8-202ENST00000396828 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
NEDD8-202ENST00000396828 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
NEDD8-202ENST00000396828 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
NEDD8-202ENST00000396828 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
NEDD8-202ENST00000396828 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
NEDD8-202ENST00000396828 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
NEDD8-202ENST00000396828 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
NEDD8-202ENST00000396828 FAM236DA0A1B0GTK5 79 aa5.1□□□□□ -1.59
NEDD8-202ENST00000396828 FAM236CP0DP71 79 aa5.1□□□□□ -1.59
NEDD8-202ENST00000396828 A8MUN3 132 aa5.08□□□□□ -1.6
NEDD8-202ENST00000396828 TMEM258P61165 79 aa5.08□□□□□ -1.6
NEDD8-202ENST00000396828 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
NEDD8-202ENST00000396828 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
NEDD8-202ENST00000396828 DMAC1Q96GE9 116 aa5.06□□□□□ -1.6
NEDD8-202ENST00000396828 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
NEDD8-202ENST00000396828 ACYP2P14621 99 aa5.04□□□□□ -1.6
NEDD8-202ENST00000396828 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
NEDD8-202ENST00000396828 KRTAP3-1Q9BYR8 98 aa5.02□□□□□ -1.61
NEDD8-202ENST00000396828 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
NEDD8-202ENST00000396828 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
NEDD8-202ENST00000396828 CHKB-CPT1BH3BT56 60 aa4.97□□□□□ -1.61
NEDD8-202ENST00000396828 S4R3F8 94 aa4.97□□□□□ -1.61
NEDD8-202ENST00000396828 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
NEDD8-202ENST00000396828 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
NEDD8-202ENST00000396828 COA5Q86WW8 74 aa4.95□□□□□ -1.62
NEDD8-202ENST00000396828 SPTSSBQ8NFR3 76 aa4.93□□□□□ -1.62
NEDD8-202ENST00000396828 LCA10Q71F78 164 aa4.92□□□□□ -1.62
NEDD8-202ENST00000396828 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
NEDD8-202ENST00000396828 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
NEDD8-202ENST00000396828 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
NEDD8-202ENST00000396828 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
NEDD8-202ENST00000396828 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
NEDD8-202ENST00000396828 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
NEDD8-202ENST00000396828 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
NEDD8-202ENST00000396828 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
NEDD8-202ENST00000396828 SEC61GP60059 68 aa4.77□□□□□ -1.65
NEDD8-202ENST00000396828 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
NEDD8-202ENST00000396828 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
NEDD8-202ENST00000396828 H0YAA0 97 aa4.75□□□□□ -1.65
NEDD8-202ENST00000396828 V9GYY9 64 aa4.74□□□□□ -1.65
NEDD8-202ENST00000396828 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
NEDD8-202ENST00000396828 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
NEDD8-202ENST00000396828 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
NEDD8-202ENST00000396828 A0A1B0GU69 56 aa4.71□□□□□ -1.66
NEDD8-202ENST00000396828 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
NEDD8-202ENST00000396828 Q1T7F1 81 aa4.7□□□□□ -1.66
NEDD8-202ENST00000396828 MT1BP07438 61 aa4.68□□□□□ -1.66
NEDD8-202ENST00000396828 NEBP20929 6669 aa4.68□□□□□ -1.66
NEDD8-202ENST00000396828 A6NN06 94 aa4.64□□□□□ -1.67
NEDD8-202ENST00000396828 P0C880 135 aa4.63□□□□□ -1.67
NEDD8-202ENST00000396828 PSPHP1O15172 72 aa4.62□□□□□ -1.67
NEDD8-202ENST00000396828 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
NEDD8-202ENST00000396828 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
NEDD8-202ENST00000396828 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
NEDD8-202ENST00000396828 A0A1B0GU33 70 aa4.6□□□□□ -1.67
NEDD8-202ENST00000396828 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
NEDD8-202ENST00000396828 Q5VV11 94 aa4.59□□□□□ -1.67
NEDD8-202ENST00000396828 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
NEDD8-202ENST00000396828 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
NEDD8-202ENST00000396828 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
NEDD8-202ENST00000396828 R4GN34 69 aa4.58□□□□□ -1.68
NEDD8-202ENST00000396828 KMT2DO14686 5537 aa4.57□□□□□ -1.68
NEDD8-202ENST00000396828 M0QZ58 72 aa4.57□□□□□ -1.68
NEDD8-202ENST00000396828 UQCR11O14957 56 aa4.55□□□□□ -1.68
NEDD8-202ENST00000396828 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
NEDD8-202ENST00000396828 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
NEDD8-202ENST00000396828 A6NED7 52 aa4.51□□□□□ -1.69
NEDD8-202ENST00000396828 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
NEDD8-202ENST00000396828 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
NEDD8-202ENST00000396828 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
NEDD8-202ENST00000396828 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
NEDD8-202ENST00000396828 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
NEDD8-202ENST00000396828 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
NEDD8-202ENST00000396828 A0A0D9SG42 100 aa4.44□□□□□ -1.7
NEDD8-202ENST00000396828 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
NEDD8-202ENST00000396828 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
NEDD8-202ENST00000396828 A8MU10 97 aa4.41□□□□□ -1.7
NEDD8-202ENST00000396828 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
NEDD8-202ENST00000396828 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
NEDD8-202ENST00000396828 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
NEDD8-202ENST00000396828 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
NEDD8-202ENST00000396828 K7ERS5 55 aa4.36□□□□□ -1.71
NEDD8-202ENST00000396828 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
NEDD8-202ENST00000396828 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
NEDD8-202ENST00000396828 MT1XP80297 61 aa4.35□□□□□ -1.71
NEDD8-202ENST00000396828 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
NEDD8-202ENST00000396828 SPRR2EP22531 72 aa4.33□□□□□ -1.72
NEDD8-202ENST00000396828 SPRR2BP35325 72 aa4.33□□□□□ -1.72
NEDD8-202ENST00000396828 SPRR2AP35326 72 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms