RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 KRTAP25-1Q3LHN0 102 aa9.26□□□□□ -0.93
TCEA1-201ENST00000396401 TNXBP22105 4242 aa9.24□□□□□ -0.93
TCEA1-201ENST00000396401 ROMO1P60602 79 aa9.21□□□□□ -0.93
TCEA1-201ENST00000396401 KRTAP13-4Q3LI77 160 aa9.2□□□□□ -0.94
TCEA1-201ENST00000396401 RYR2Q92736 4967 aa9.2□□□□□ -0.94
TCEA1-201ENST00000396401 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
TCEA1-201ENST00000396401 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
TCEA1-201ENST00000396401 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.95
TCEA1-201ENST00000396401 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
TCEA1-201ENST00000396401 K7ERS5 55 aa9.09□□□□□ -0.95
TCEA1-201ENST00000396401 LRP2P98164 4655 aa9.07□□□□□ -0.96
TCEA1-201ENST00000396401 P0C880 135 aa9.06□□□□□ -0.96
TCEA1-201ENST00000396401 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
TCEA1-201ENST00000396401 C10orf95Q9H7T3 257 aa9.03□□□□□ -0.96
TCEA1-201ENST00000396401 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
TCEA1-201ENST00000396401 XP32Q5T750 250 aa8.98□□□□□ -0.97
TCEA1-201ENST00000396401 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
TCEA1-201ENST00000396401 RYR3Q15413 4870 aa8.98□□□□□ -0.97
TCEA1-201ENST00000396401 S4R3F8 94 aa8.97□□□□□ -0.97
TCEA1-201ENST00000396401 KRTAP17-1Q9BYP8 105 aa8.96□□□□□ -0.98
TCEA1-201ENST00000396401 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
TCEA1-201ENST00000396401 RYR1P21817 5038 aa8.92□□□□□ -0.98
TCEA1-201ENST00000396401 Q5VSD8 79 aa8.92□□□□□ -0.98
TCEA1-201ENST00000396401 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
TCEA1-201ENST00000396401 SPINT4Q6UDR6 99 aa8.85□□□□□ -0.99
TCEA1-201ENST00000396401 ABCA13Q86UQ4 5058 aa8.82□□□□□ -1
TCEA1-201ENST00000396401 NDUFAF8A1L188 74 aa8.73□□□□□ -1.01
TCEA1-201ENST00000396401 KRTAP12-1P59990 96 aa8.72□□□□□ -1.01
TCEA1-201ENST00000396401 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
TCEA1-201ENST00000396401 MT1HL1P0DM35 61 aa8.67□□□□□ -1.02
TCEA1-201ENST00000396401 MUC2Q02817 5179 aa8.54□□□□□ -1.04
TCEA1-201ENST00000396401 A0A0A0MQY5 61 aa8.52□□□□□ -1.04
TCEA1-201ENST00000396401 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
TCEA1-201ENST00000396401 M0QZ58 72 aa8.51□□□□□ -1.05
TCEA1-201ENST00000396401 KRTAP15-1Q3LI76 137 aa8.5□□□□□ -1.05
TCEA1-201ENST00000396401 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.05
TCEA1-201ENST00000396401 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
TCEA1-201ENST00000396401 R4GN34 69 aa8.41□□□□□ -1.06
TCEA1-201ENST00000396401 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
TCEA1-201ENST00000396401 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
TCEA1-201ENST00000396401 HERC2O95714 4834 aa8.16□□□□□ -1.1
TCEA1-201ENST00000396401 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
TCEA1-201ENST00000396401 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
TCEA1-201ENST00000396401 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
TCEA1-201ENST00000396401 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
TCEA1-201ENST00000396401 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
TCEA1-201ENST00000396401 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
TCEA1-201ENST00000396401 HERC1Q15751 4861 aa8□□□□□ -1.13
TCEA1-201ENST00000396401 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
TCEA1-201ENST00000396401 J3QL48 77 aa7.97□□□□□ -1.13
TCEA1-201ENST00000396401 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
TCEA1-201ENST00000396401 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
TCEA1-201ENST00000396401 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.17
TCEA1-201ENST00000396401 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
TCEA1-201ENST00000396401 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
TCEA1-201ENST00000396401 TNP1P09430 55 aa7.63□□□□□ -1.19
TCEA1-201ENST00000396401 UBR4Q5T4S7 5183 aa7.57□□□□□ -1.2
TCEA1-201ENST00000396401 LCE2CQ5TA81 110 aa7.46□□□□□ -1.21
TCEA1-201ENST00000396401 M0R2T5 61 aa7.46□□□□□ -1.22
TCEA1-201ENST00000396401 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
TCEA1-201ENST00000396401 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
TCEA1-201ENST00000396401 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
TCEA1-201ENST00000396401 SPRR5A0A1B0GTR4 108 aa7.3□□□□□ -1.24
TCEA1-201ENST00000396401 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
TCEA1-201ENST00000396401 MT1FP04733 61 aa7.27□□□□□ -1.25
TCEA1-201ENST00000396401 MT1HP80294 61 aa7.25□□□□□ -1.25
TCEA1-201ENST00000396401 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
TCEA1-201ENST00000396401 MT2AP02795 61 aa7.2□□□□□ -1.26
TCEA1-201ENST00000396401 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
TCEA1-201ENST00000396401 USH2AO75445 5202 aa7.11□□□□□ -1.27
TCEA1-201ENST00000396401 KMT2DO14686 5537 aa7.09□□□□□ -1.28
TCEA1-201ENST00000396401 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
TCEA1-201ENST00000396401 MT1XP80297 61 aa7.01□□□□□ -1.29
TCEA1-201ENST00000396401 MT1BP07438 61 aa7□□□□□ -1.29
TCEA1-201ENST00000396401 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
TCEA1-201ENST00000396401 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
TCEA1-201ENST00000396401 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
TCEA1-201ENST00000396401 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
TCEA1-201ENST00000396401 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
TCEA1-201ENST00000396401 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
TCEA1-201ENST00000396401 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
TCEA1-201ENST00000396401 INE1O15225 51 aa6.71□□□□□ -1.33
TCEA1-201ENST00000396401 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.35
TCEA1-201ENST00000396401 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
TCEA1-201ENST00000396401 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
TCEA1-201ENST00000396401 LCE2BO14633 110 aa6.59□□□□□ -1.35
TCEA1-201ENST00000396401 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
TCEA1-201ENST00000396401 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
TCEA1-201ENST00000396401 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
TCEA1-201ENST00000396401 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
TCEA1-201ENST00000396401 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
TCEA1-201ENST00000396401 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
TCEA1-201ENST00000396401 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
TCEA1-201ENST00000396401 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
TCEA1-201ENST00000396401 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
TCEA1-201ENST00000396401 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
TCEA1-201ENST00000396401 MT1LQ93083 61 aa6.05□□□□□ -1.44
TCEA1-201ENST00000396401 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
TCEA1-201ENST00000396401 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
TCEA1-201ENST00000396401 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms