RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 Q5VV11 94 aa10.51□□□□□ -0.73
PRKCD-202ENST00000394729 SPTSSBQ8NFR3 76 aa10.51□□□□□ -0.73
PRKCD-202ENST00000394729 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
PRKCD-202ENST00000394729 LINC01558Q9Y6Z2 57 aa10.42□□□□□ -0.74
PRKCD-202ENST00000394729 A6NED7 52 aa10.41□□□□□ -0.74
PRKCD-202ENST00000394729 A0A1B0GU69 56 aa10.39□□□□□ -0.75
PRKCD-202ENST00000394729 LCA10Q71F78 164 aa10.36□□□□□ -0.75
PRKCD-202ENST00000394729 RBM12B-AS1Q9P1G2 102 aa10.33□□□□□ -0.76
PRKCD-202ENST00000394729 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
PRKCD-202ENST00000394729 KRTAP4-1Q9BYQ7 146 aa10.28□□□□□ -0.76
PRKCD-202ENST00000394729 RNF213Q63HN8 5207 aa10.27□□□□□ -0.77
PRKCD-202ENST00000394729 HMCN2Q8NDA2 5059 aa10.25□□□□□ -0.77
PRKCD-202ENST00000394729 SEC61BP60468 96 aaKnown RBP10.22□□□□□ -0.77
PRKCD-202ENST00000394729 S4R3F8 94 aa10.2□□□□□ -0.78
PRKCD-202ENST00000394729 UBR4Q5T4S7 5183 aa10.2□□□□□ -0.78
PRKCD-202ENST00000394729 A6NN06 94 aa10.18□□□□□ -0.78
PRKCD-202ENST00000394729 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
PRKCD-202ENST00000394729 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
PRKCD-202ENST00000394729 H1FX-AS1Q4G0G2 97 aa10.12□□□□□ -0.79
PRKCD-202ENST00000394729 FAT4Q6V0I7 4981 aa10.12□□□□□ -0.79
PRKCD-202ENST00000394729 CDC42SE1Q9NRR8 79 aa10.09□□□□□ -0.79
PRKCD-202ENST00000394729 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
PRKCD-202ENST00000394729 PRAC1Q96KF2 57 aa10.04□□□□□ -0.8
PRKCD-202ENST00000394729 UQCR11O14957 56 aa10.02□□□□□ -0.81
PRKCD-202ENST00000394729 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
PRKCD-202ENST00000394729 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
PRKCD-202ENST00000394729 A0A1B0GU33 70 aa9.97□□□□□ -0.81
PRKCD-202ENST00000394729 P0C880 135 aa9.95□□□□□ -0.82
PRKCD-202ENST00000394729 H0YAA0 97 aa9.91□□□□□ -0.82
PRKCD-202ENST00000394729 CSAG1Q6PB30 78 aa9.91□□□□□ -0.82
PRKCD-202ENST00000394729 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
PRKCD-202ENST00000394729 A0A0D9SG42 100 aa9.88□□□□□ -0.83
PRKCD-202ENST00000394729 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
PRKCD-202ENST00000394729 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
PRKCD-202ENST00000394729 KRTAP19-2Q3LHN2 52 aa9.77□□□□□ -0.85
PRKCD-202ENST00000394729 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
PRKCD-202ENST00000394729 FLGP20930 4061 aaPredicted RBP9.66□□□□□ -0.86
PRKCD-202ENST00000394729 H3BS24 57 aa9.64□□□□□ -0.87
PRKCD-202ENST00000394729 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
PRKCD-202ENST00000394729 M0R2T5 61 aa9.58□□□□□ -0.88
PRKCD-202ENST00000394729 M0QZ58 72 aa9.56□□□□□ -0.88
PRKCD-202ENST00000394729 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
PRKCD-202ENST00000394729 R4GN34 69 aa9.53□□□□□ -0.88
PRKCD-202ENST00000394729 LCE2CQ5TA81 110 aa9.52□□□□□ -0.88
PRKCD-202ENST00000394729 KRTAP12-2P59991 146 aa9.43□□□□□ -0.9
PRKCD-202ENST00000394729 K7ERS5 55 aa9.4□□□□□ -0.9
PRKCD-202ENST00000394729 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
PRKCD-202ENST00000394729 MT1HP80294 61 aa9.36□□□□□ -0.91
PRKCD-202ENST00000394729 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
PRKCD-202ENST00000394729 KRTAP10-10P60014 251 aa9.14□□□□□ -0.95
PRKCD-202ENST00000394729 KRTAP25-1Q3LHN0 102 aa9.09□□□□□ -0.95
PRKCD-202ENST00000394729 MT1FP04733 61 aa9.08□□□□□ -0.96
PRKCD-202ENST00000394729 ROMO1P60602 79 aa9.08□□□□□ -0.96
PRKCD-202ENST00000394729 MT2AP02795 61 aa9.05□□□□□ -0.96
PRKCD-202ENST00000394729 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
PRKCD-202ENST00000394729 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
PRKCD-202ENST00000394729 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
PRKCD-202ENST00000394729 USH2AO75445 5202 aa8.95□□□□□ -0.98
PRKCD-202ENST00000394729 KRTAP19-1Q8IUB9 90 aa8.93□□□□□ -0.98
PRKCD-202ENST00000394729 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
PRKCD-202ENST00000394729 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
PRKCD-202ENST00000394729 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
PRKCD-202ENST00000394729 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
PRKCD-202ENST00000394729 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
PRKCD-202ENST00000394729 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
PRKCD-202ENST00000394729 MT1BP07438 61 aa8.55□□□□□ -1.04
PRKCD-202ENST00000394729 LCE2BO14633 110 aa8.51□□□□□ -1.05
PRKCD-202ENST00000394729 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.05
PRKCD-202ENST00000394729 TNP1P09430 55 aa8.43□□□□□ -1.06
PRKCD-202ENST00000394729 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
PRKCD-202ENST00000394729 KMT2DO14686 5537 aa8.41□□□□□ -1.06
PRKCD-202ENST00000394729 MT1XP80297 61 aa8.35□□□□□ -1.07
PRKCD-202ENST00000394729 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
PRKCD-202ENST00000394729 SSPOA2VEC9 5147 aa8.21□□□□□ -1.1
PRKCD-202ENST00000394729 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
PRKCD-202ENST00000394729 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
PRKCD-202ENST00000394729 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
PRKCD-202ENST00000394729 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
PRKCD-202ENST00000394729 KRTAP10-12P60413 245 aa8.02□□□□□ -1.12
PRKCD-202ENST00000394729 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
PRKCD-202ENST00000394729 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.14
PRKCD-202ENST00000394729 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
PRKCD-202ENST00000394729 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
PRKCD-202ENST00000394729 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
PRKCD-202ENST00000394729 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.16
PRKCD-202ENST00000394729 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
PRKCD-202ENST00000394729 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
PRKCD-202ENST00000394729 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
PRKCD-202ENST00000394729 KRTAP19-6Q3LI70 58 aa7.64□□□□□ -1.19
PRKCD-202ENST00000394729 MUC12Q9UKN1 5478 aa7.6□□□□□ -1.19
PRKCD-202ENST00000394729 MACF1Q9UPN3 7388 aaKnown RBP7.59□□□□□ -1.19
PRKCD-202ENST00000394729 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
PRKCD-202ENST00000394729 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
PRKCD-202ENST00000394729 SYNE2Q8WXH0 6885 aaKnown RBP7.52□□□□□ -1.21
PRKCD-202ENST00000394729 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
PRKCD-202ENST00000394729 DSTQ03001 7570 aaKnown RBP7.39□□□□□ -1.23
PRKCD-202ENST00000394729 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
PRKCD-202ENST00000394729 MT1EP04732 61 aa7.25□□□□□ -1.25
PRKCD-202ENST00000394729 SPRR5A0A1B0GTR4 108 aa7.25□□□□□ -1.25
PRKCD-202ENST00000394729 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms