RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
SRSF5-201ENST00000394366 MUC2Q02817 5179 aa6.91□□□□□ -1.3
SRSF5-201ENST00000394366 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
SRSF5-201ENST00000394366 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
SRSF5-201ENST00000394366 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
SRSF5-201ENST00000394366 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
SRSF5-201ENST00000394366 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
SRSF5-201ENST00000394366 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
SRSF5-201ENST00000394366 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
SRSF5-201ENST00000394366 PSPHP1O15172 72 aa6.8□□□□□ -1.32
SRSF5-201ENST00000394366 Q5VV11 94 aa6.76□□□□□ -1.33
SRSF5-201ENST00000394366 FAT4Q6V0I7 4981 aa6.75□□□□□ -1.33
SRSF5-201ENST00000394366 A0A1B0GU69 56 aa6.74□□□□□ -1.33
SRSF5-201ENST00000394366 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
SRSF5-201ENST00000394366 SEC61GP60059 68 aa6.72□□□□□ -1.33
SRSF5-201ENST00000394366 S4R3F8 94 aa6.72□□□□□ -1.33
SRSF5-201ENST00000394366 LCA10Q71F78 164 aa6.67□□□□□ -1.34
SRSF5-201ENST00000394366 A6NED7 52 aa6.65□□□□□ -1.35
SRSF5-201ENST00000394366 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
SRSF5-201ENST00000394366 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
SRSF5-201ENST00000394366 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
SRSF5-201ENST00000394366 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
SRSF5-201ENST00000394366 UQCR11O14957 56 aa6.58□□□□□ -1.36
SRSF5-201ENST00000394366 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
SRSF5-201ENST00000394366 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
SRSF5-201ENST00000394366 MT1HP80294 61 aa6.54□□□□□ -1.36
SRSF5-201ENST00000394366 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
SRSF5-201ENST00000394366 A0A1B0GU33 70 aa6.5□□□□□ -1.37
SRSF5-201ENST00000394366 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
SRSF5-201ENST00000394366 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
SRSF5-201ENST00000394366 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
SRSF5-201ENST00000394366 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
SRSF5-201ENST00000394366 H0YAA0 97 aa6.47□□□□□ -1.37
SRSF5-201ENST00000394366 M0R2T5 61 aa6.46□□□□□ -1.38
SRSF5-201ENST00000394366 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
SRSF5-201ENST00000394366 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
SRSF5-201ENST00000394366 A8MU10 97 aa6.4□□□□□ -1.38
SRSF5-201ENST00000394366 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.38
SRSF5-201ENST00000394366 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
SRSF5-201ENST00000394366 P0C880 135 aa6.35□□□□□ -1.39
SRSF5-201ENST00000394366 M0QZ58 72 aa6.3□□□□□ -1.4
SRSF5-201ENST00000394366 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
SRSF5-201ENST00000394366 K7ERS5 55 aa6.25□□□□□ -1.41
SRSF5-201ENST00000394366 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
SRSF5-201ENST00000394366 A6NN06 94 aa6.22□□□□□ -1.41
SRSF5-201ENST00000394366 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
SRSF5-201ENST00000394366 R4GN34 69 aa6.21□□□□□ -1.42
SRSF5-201ENST00000394366 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
SRSF5-201ENST00000394366 A0A0D9SG42 100 aa6.16□□□□□ -1.42
SRSF5-201ENST00000394366 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
SRSF5-201ENST00000394366 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
SRSF5-201ENST00000394366 MT2AP02795 61 aa6.12□□□□□ -1.43
SRSF5-201ENST00000394366 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
SRSF5-201ENST00000394366 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
SRSF5-201ENST00000394366 MT1FP04733 61 aa6.07□□□□□ -1.44
SRSF5-201ENST00000394366 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
SRSF5-201ENST00000394366 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
SRSF5-201ENST00000394366 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
SRSF5-201ENST00000394366 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
SRSF5-201ENST00000394366 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
SRSF5-201ENST00000394366 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
SRSF5-201ENST00000394366 ROMO1P60602 79 aa5.95□□□□□ -1.46
SRSF5-201ENST00000394366 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
SRSF5-201ENST00000394366 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
SRSF5-201ENST00000394366 USH2AO75445 5202 aa5.9□□□□□ -1.47
SRSF5-201ENST00000394366 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
SRSF5-201ENST00000394366 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
SRSF5-201ENST00000394366 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
SRSF5-201ENST00000394366 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
SRSF5-201ENST00000394366 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
SRSF5-201ENST00000394366 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
SRSF5-201ENST00000394366 H3BS24 57 aa5.77□□□□□ -1.48
SRSF5-201ENST00000394366 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
SRSF5-201ENST00000394366 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
SRSF5-201ENST00000394366 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
SRSF5-201ENST00000394366 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
SRSF5-201ENST00000394366 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
SRSF5-201ENST00000394366 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
SRSF5-201ENST00000394366 MT1BP07438 61 aa5.63□□□□□ -1.51
SRSF5-201ENST00000394366 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
SRSF5-201ENST00000394366 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
SRSF5-201ENST00000394366 TNP1P09430 55 aa5.59□□□□□ -1.52
SRSF5-201ENST00000394366 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
SRSF5-201ENST00000394366 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
SRSF5-201ENST00000394366 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
SRSF5-201ENST00000394366 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
SRSF5-201ENST00000394366 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
SRSF5-201ENST00000394366 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
SRSF5-201ENST00000394366 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SRSF5-201ENST00000394366 MT1XP80297 61 aa5.48□□□□□ -1.53
SRSF5-201ENST00000394366 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
SRSF5-201ENST00000394366 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
SRSF5-201ENST00000394366 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
SRSF5-201ENST00000394366 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
SRSF5-201ENST00000394366 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
SRSF5-201ENST00000394366 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
SRSF5-201ENST00000394366 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
SRSF5-201ENST00000394366 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
SRSF5-201ENST00000394366 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
SRSF5-201ENST00000394366 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms