RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 H0YAA0 97 aa4.14□□□□□ -1.75
GAPVD1-207ENST00000394105 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
GAPVD1-207ENST00000394105 UBR4Q5T4S7 5183 aa4.13□□□□□ -1.75
GAPVD1-207ENST00000394105 ACYP2P14621 99 aa4.12□□□□□ -1.75
GAPVD1-207ENST00000394105 SSBP3-AS1Q7Z2R9 100 aa4.11□□□□□ -1.75
GAPVD1-207ENST00000394105 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
GAPVD1-207ENST00000394105 MT1HL1P0DM35 61 aa4.1□□□□□ -1.75
GAPVD1-207ENST00000394105 KRTAP10-8P60410 259 aa4.1□□□□□ -1.75
GAPVD1-207ENST00000394105 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
GAPVD1-207ENST00000394105 KRTAP4-5Q9BYR2 181 aa4.1□□□□□ -1.75
GAPVD1-207ENST00000394105 KRTAP3-3Q9BYR6 98 aa4.1□□□□□ -1.75
GAPVD1-207ENST00000394105 Q8N1X5 172 aa4.09□□□□□ -1.76
GAPVD1-207ENST00000394105 A0A1B0GU69 56 aa4.07□□□□□ -1.76
GAPVD1-207ENST00000394105 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
GAPVD1-207ENST00000394105 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
GAPVD1-207ENST00000394105 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
GAPVD1-207ENST00000394105 C20orf166-AS1Q96NR2 134 aa4.05□□□□□ -1.76
GAPVD1-207ENST00000394105 A8MUU9 505 aa4.04□□□□□ -1.76
GAPVD1-207ENST00000394105 KRTAP3-2Q9BYR7 98 aa4.02□□□□□ -1.77
GAPVD1-207ENST00000394105 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
GAPVD1-207ENST00000394105 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
GAPVD1-207ENST00000394105 RPS29P62273 56 aaKnown RBP3.99□□□□□ -1.77
GAPVD1-207ENST00000394105 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
GAPVD1-207ENST00000394105 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
GAPVD1-207ENST00000394105 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
GAPVD1-207ENST00000394105 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
GAPVD1-207ENST00000394105 P0C880 135 aa3.94□□□□□ -1.78
GAPVD1-207ENST00000394105 CRIPTQ9P021 101 aa3.9□□□□□ -1.78
GAPVD1-207ENST00000394105 UQCR11O14957 56 aa3.9□□□□□ -1.79
GAPVD1-207ENST00000394105 LINC01554Q52M75 96 aa3.9□□□□□ -1.79
GAPVD1-207ENST00000394105 XP32Q5T750 250 aa3.89□□□□□ -1.79
GAPVD1-207ENST00000394105 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
GAPVD1-207ENST00000394105 Q5VSD8 79 aa3.83□□□□□ -1.8
GAPVD1-207ENST00000394105 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
GAPVD1-207ENST00000394105 H1FX-AS1Q4G0G2 97 aa3.82□□□□□ -1.8
GAPVD1-207ENST00000394105 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
GAPVD1-207ENST00000394105 M0R2T5 61 aa3.81□□□□□ -1.8
GAPVD1-207ENST00000394105 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-207ENST00000394105 KRTAP12-2P59991 146 aa3.81□□□□□ -1.8
GAPVD1-207ENST00000394105 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-207ENST00000394105 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
GAPVD1-207ENST00000394105 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
GAPVD1-207ENST00000394105 USH2AO75445 5202 aa3.77□□□□□ -1.81
GAPVD1-207ENST00000394105 A0A1B0GU33 70 aa3.77□□□□□ -1.81
GAPVD1-207ENST00000394105 H3BS24 57 aa3.76□□□□□ -1.81
GAPVD1-207ENST00000394105 ROMO1P60602 79 aa3.76□□□□□ -1.81
GAPVD1-207ENST00000394105 A0A0D9SG42 100 aa3.76□□□□□ -1.81
GAPVD1-207ENST00000394105 S4R3F8 94 aa3.75□□□□□ -1.81
GAPVD1-207ENST00000394105 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
GAPVD1-207ENST00000394105 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
GAPVD1-207ENST00000394105 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
GAPVD1-207ENST00000394105 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.81
GAPVD1-207ENST00000394105 R4GN34 69 aa3.65□□□□□ -1.83
GAPVD1-207ENST00000394105 KMT2DO14686 5537 aa3.63□□□□□ -1.83
GAPVD1-207ENST00000394105 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
GAPVD1-207ENST00000394105 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
GAPVD1-207ENST00000394105 M0QZ58 72 aa3.57□□□□□ -1.84
GAPVD1-207ENST00000394105 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
GAPVD1-207ENST00000394105 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
GAPVD1-207ENST00000394105 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
GAPVD1-207ENST00000394105 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
GAPVD1-207ENST00000394105 MT1HP80294 61 aa3.39□□□□□ -1.87
GAPVD1-207ENST00000394105 MT1FP04733 61 aa3.37□□□□□ -1.87
GAPVD1-207ENST00000394105 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
GAPVD1-207ENST00000394105 TNP1P09430 55 aa3.33□□□□□ -1.88
GAPVD1-207ENST00000394105 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
GAPVD1-207ENST00000394105 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
GAPVD1-207ENST00000394105 MT2AP02795 61 aa3.31□□□□□ -1.88
GAPVD1-207ENST00000394105 MT1BP07438 61 aa3.28□□□□□ -1.88
GAPVD1-207ENST00000394105 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
GAPVD1-207ENST00000394105 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
GAPVD1-207ENST00000394105 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
GAPVD1-207ENST00000394105 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
GAPVD1-207ENST00000394105 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
GAPVD1-207ENST00000394105 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
GAPVD1-207ENST00000394105 MT1XP80297 61 aa3.23□□□□□ -1.89
GAPVD1-207ENST00000394105 LCE2BO14633 110 aa3.21□□□□□ -1.9
GAPVD1-207ENST00000394105 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
GAPVD1-207ENST00000394105 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
GAPVD1-207ENST00000394105 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
GAPVD1-207ENST00000394105 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
GAPVD1-207ENST00000394105 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
GAPVD1-207ENST00000394105 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
GAPVD1-207ENST00000394105 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
GAPVD1-207ENST00000394105 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
GAPVD1-207ENST00000394105 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
GAPVD1-207ENST00000394105 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
GAPVD1-207ENST00000394105 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
GAPVD1-207ENST00000394105 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
GAPVD1-207ENST00000394105 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
GAPVD1-207ENST00000394105 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.93
GAPVD1-207ENST00000394105 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
GAPVD1-207ENST00000394105 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
GAPVD1-207ENST00000394105 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
GAPVD1-207ENST00000394105 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
GAPVD1-207ENST00000394105 LCE2DQ5TA82 110 aaPredicted RBP2.85□□□□□ -1.95
GAPVD1-207ENST00000394105 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
GAPVD1-207ENST00000394105 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
GAPVD1-207ENST00000394105 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
GAPVD1-207ENST00000394105 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms